RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 OGFOD1Q8N543 542 aa17.2■□□□□ 0.34
RPAIN-209ENST00000571558 MEIS3Q99687 375 aa17.2■□□□□ 0.34
RPAIN-209ENST00000571558 ATP2B4P23634 1241 aa17.19■□□□□ 0.34
RPAIN-209ENST00000571558 INHBEP58166 350 aa17.19■□□□□ 0.34
RPAIN-209ENST00000571558 GCKRQ14397 625 aa17.19■□□□□ 0.34
RPAIN-209ENST00000571558 RTL5Q5HYW3 569 aaPredicted RBP17.19■□□□□ 0.34
RPAIN-209ENST00000571558 UTYO14607 1347 aa17.19■□□□□ 0.34
RPAIN-209ENST00000571558 MYO3BQ8WXR4 1341 aa17.19■□□□□ 0.34
RPAIN-209ENST00000571558 TTLL12Q14166 644 aaPredicted RBP17.18■□□□□ 0.34
RPAIN-209ENST00000571558 CCDC191Q8NCU4 936 aa17.18■□□□□ 0.34
RPAIN-209ENST00000571558 SEC31BQ9NQW1 1179 aa17.18■□□□□ 0.34
RPAIN-209ENST00000571558 PDE8AO60658 829 aa17.17■□□□□ 0.34
RPAIN-209ENST00000571558 MOB2Q70IA6 237 aa17.17■□□□□ 0.34
RPAIN-209ENST00000571558 ARMC9Q7Z3E5 817 aa17.17■□□□□ 0.34
RPAIN-209ENST00000571558 PSME4Q14997 1843 aa17.17■□□□□ 0.34
RPAIN-209ENST00000571558 COL4A1P02462 1669 aa17.16■□□□□ 0.34
RPAIN-209ENST00000571558 GRM8O00222 908 aa17.16■□□□□ 0.34
RPAIN-209ENST00000571558 PCCAP05165 728 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-209ENST00000571558 NBPF7P0C2Y1 421 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-209ENST00000571558 NBPF9Q3BBW0 867 aa17.16■□□□□ 0.34
RPAIN-209ENST00000571558 ANKRD18AQ8IVF6 992 aa17.16■□□□□ 0.34
RPAIN-209ENST00000571558 CHMP4BQ9H444 224 aaKnown RBP17.16■□□□□ 0.34
RPAIN-209ENST00000571558 CWC25Q9NXE8 425 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-209ENST00000571558 WNT10BO00744 389 aa17.15■□□□□ 0.34
RPAIN-209ENST00000571558 GNAI3P08754 354 aa17.15■□□□□ 0.34
RPAIN-209ENST00000571558 CASP7P55210 303 aa17.15■□□□□ 0.34
RPAIN-209ENST00000571558 HABP4Q5JVS0 413 aaKnown RBP17.15■□□□□ 0.34
RPAIN-209ENST00000571558 STRIP1Q5VSL9 837 aa17.15■□□□□ 0.34
RPAIN-209ENST00000571558 H7C1W4 665 aa17.14■□□□□ 0.33
RPAIN-209ENST00000571558 LDLRAD1Q5T700 205 aa17.14■□□□□ 0.33
RPAIN-209ENST00000571558 CDC5LQ99459 802 aaKnown RBP17.14■□□□□ 0.33
RPAIN-209ENST00000571558 MED23Q9ULK4 1368 aa17.14■□□□□ 0.33
RPAIN-209ENST00000571558 MANSC4A6NHS7 340 aaPredicted RBP17.13■□□□□ 0.33
RPAIN-209ENST00000571558 UNCXA6NJT0 531 aa17.13■□□□□ 0.33
RPAIN-209ENST00000571558 DACT2Q5SW24 774 aa17.13■□□□□ 0.33
RPAIN-209ENST00000571558 PRAMEF18Q5VWM3 479 aa17.13■□□□□ 0.33
RPAIN-209ENST00000571558 SPRYD7Q5W111 196 aa17.13■□□□□ 0.33
RPAIN-209ENST00000571558 APOBEC3FQ8IUX4 373 aaKnown RBP17.13■□□□□ 0.33
RPAIN-209ENST00000571558 PCDHB15Q9Y5E8 787 aa17.13■□□□□ 0.33
RPAIN-209ENST00000571558 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
RPAIN-209ENST00000571558 PTPN12Q05209 780 aaKnown RBP17.13■□□□□ 0.33
RPAIN-209ENST00000571558 KAZALD1Q96I82 304 aa17.13■□□□□ 0.33
RPAIN-209ENST00000571558 COA1Q9GZY4 146 aa17.13■□□□□ 0.33
RPAIN-209ENST00000571558 C9orf78Q9NZ63 289 aaPredicted RBP17.13■□□□□ 0.33
RPAIN-209ENST00000571558 GNAI2P04899 355 aa17.12■□□□□ 0.33
RPAIN-209ENST00000571558 ZBTB48P10074 688 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-209ENST00000571558 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
RPAIN-209ENST00000571558 C1orf115Q9H7X2 142 aa17.12■□□□□ 0.33
RPAIN-209ENST00000571558 BSDC1Q9NW68 430 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-209ENST00000571558 PPP4R2Q9NY27 417 aa17.12■□□□□ 0.33
RPAIN-209ENST00000571558 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-209ENST00000571558 SCAF8Q9UPN6 1271 aaKnown RBP17.11■□□□□ 0.33
RPAIN-209ENST00000571558 MKRN3Q13064 507 aaKnown RBP17.1■□□□□ 0.33
RPAIN-209ENST00000571558 MAP3K11Q16584 847 aa17.1■□□□□ 0.33
RPAIN-209ENST00000571558 OTOP1Q7RTM1 612 aa17.1■□□□□ 0.33
RPAIN-209ENST00000571558 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
RPAIN-209ENST00000571558 IFNL1Q8IU54 200 aa17.1■□□□□ 0.33
RPAIN-209ENST00000571558 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
RPAIN-209ENST00000571558 R3HDMLQ9H3Y0 253 aa17.1■□□□□ 0.33
RPAIN-209ENST00000571558 TRIM17Q9Y577 477 aa17.1■□□□□ 0.33
RPAIN-209ENST00000571558 LRRFIP2Q9Y608 721 aaKnown RBP17.1■□□□□ 0.33
RPAIN-209ENST00000571558 HTTP42858 3142 aa17.1■□□□□ 0.33
RPAIN-209ENST00000571558 CEP85Q6P2H3 762 aa17.09■□□□□ 0.33
RPAIN-209ENST00000571558 SIRT2Q8IXJ6 389 aa17.09■□□□□ 0.33
RPAIN-209ENST00000571558 SLC10A4Q96EP9 437 aa17.09■□□□□ 0.33
RPAIN-209ENST00000571558 ERO1AQ96HE7 468 aa17.09■□□□□ 0.33
RPAIN-209ENST00000571558 SUCLG2Q96I99 432 aa17.09■□□□□ 0.33
RPAIN-209ENST00000571558 MINPP1Q9UNW1 487 aa17.09■□□□□ 0.33
RPAIN-209ENST00000571558 LEMD3Q9Y2U8 911 aa17.09■□□□□ 0.33
RPAIN-209ENST00000571558 PPP1R12BO60237 982 aaPredicted RBP17.08■□□□□ 0.32
RPAIN-209ENST00000571558 OTUD7BQ6GQQ9 843 aa17.08■□□□□ 0.32
RPAIN-209ENST00000571558 ANKRD44Q8N8A2 993 aa17.08■□□□□ 0.32
RPAIN-209ENST00000571558 ZBED3Q96IU2 234 aaPredicted RBP17.08■□□□□ 0.32
RPAIN-209ENST00000571558 ANGEL1Q9UNK9 670 aaKnown RBP17.08■□□□□ 0.32
RPAIN-209ENST00000571558 PPP2R3BQ9Y5P8 575 aa17.08■□□□□ 0.32
RPAIN-209ENST00000571558 MKI67P46013 3256 aaKnown RBP17.08■□□□□ 0.32
RPAIN-209ENST00000571558 CTSWP56202 376 aa17.07■□□□□ 0.32
RPAIN-209ENST00000571558 FOXO4P98177 505 aa17.07■□□□□ 0.32
RPAIN-209ENST00000571558 MTX1Q13505 466 aa17.07■□□□□ 0.32
RPAIN-209ENST00000571558 EPHA10Q5JZY3 1008 aa17.07■□□□□ 0.32
RPAIN-209ENST00000571558 TTLL5Q6EMB2 1281 aa17.07■□□□□ 0.32
RPAIN-209ENST00000571558 RPAP2Q8IXW5 612 aaPredicted RBP17.07■□□□□ 0.32
RPAIN-209ENST00000571558 ARMC5Q96C12 935 aa17.07■□□□□ 0.32
RPAIN-209ENST00000571558 HDAC5Q9UQL6 1122 aa17.07■□□□□ 0.32
RPAIN-209ENST00000571558 PTPN22Q9Y2R2 807 aa17.07■□□□□ 0.32
RPAIN-209ENST00000571558 POTEFA5A3E0 1075 aa17.06■□□□□ 0.32
RPAIN-209ENST00000571558 RABL6Q3YEC7 729 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-209ENST00000571558 TTLL11Q8NHH1 800 aa17.06■□□□□ 0.32
RPAIN-209ENST00000571558 CCDC85AQ96PX6 553 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-209ENST00000571558 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
RPAIN-209ENST00000571558 DEFB129Q9H1M3 183 aa17.06■□□□□ 0.32
RPAIN-209ENST00000571558 BICC1Q9H694 974 aaKnown RBP17.06■□□□□ 0.32
RPAIN-209ENST00000571558 SASH1O94885 1247 aa17.05■□□□□ 0.32
RPAIN-209ENST00000571558 ATP8B2P98198 1209 aa17.05■□□□□ 0.32
RPAIN-209ENST00000571558 HDAC1Q13547 482 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-209ENST00000571558 SUPT20HL1Q3ZLR7 823 aa17.05■□□□□ 0.32
RPAIN-209ENST00000571558 MTMR14Q8NCE2 650 aa17.05■□□□□ 0.32
RPAIN-209ENST00000571558 ANKRD2Q9GZV1 360 aa17.05■□□□□ 0.32
RPAIN-209ENST00000571558 IGHDP01880 384 aa17.04■□□□□ 0.32
RPAIN-209ENST00000571558 PRKG1Q13976 671 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms