RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 TBC1D22AQ8WUA7 517 aa14.41□□□□□ -0.1
CDRT1-206ENST00000571263 KIAA1551Q9HCM1 1747 aa14.41□□□□□ -0.1
CDRT1-206ENST00000571263 RNF113AO15541 343 aaKnown RBP14.4□□□□□ -0.1
CDRT1-206ENST00000571263 KIAA2012Q0VF49 1180 aa14.4□□□□□ -0.1
CDRT1-206ENST00000571263 SCARF1Q14162 830 aa14.4□□□□□ -0.1
CDRT1-206ENST00000571263 UBE3CQ15386 1083 aa14.4□□□□□ -0.1
CDRT1-206ENST00000571263 TXNRD3Q86VQ6 643 aa14.4□□□□□ -0.1
CDRT1-206ENST00000571263 SNRKQ9NRH2 765 aa14.4□□□□□ -0.1
CDRT1-206ENST00000571263 HELLSQ9NRZ9 838 aa14.4□□□□□ -0.1
CDRT1-206ENST00000571263 SUGT1Q9Y2Z0 365 aa14.4□□□□□ -0.1
CDRT1-206ENST00000571263 WTIPA6NIX2 430 aaPredicted RBP14.39□□□□□ -0.11
CDRT1-206ENST00000571263 RIMBP2O15034 1052 aa14.39□□□□□ -0.11
CDRT1-206ENST00000571263 KLRK1P26718 216 aa14.39□□□□□ -0.11
CDRT1-206ENST00000571263 FHDC1Q9C0D6 1143 aaPredicted RBP14.39□□□□□ -0.11
CDRT1-206ENST00000571263 LRP2BPQ9P2M1 347 aa14.39□□□□□ -0.11
CDRT1-206ENST00000571263 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
CDRT1-206ENST00000571263 BCS1LQ9Y276 419 aa14.39□□□□□ -0.11
CDRT1-206ENST00000571263 SNED1Q8TER0 1413 aa14.39□□□□□ -0.11
CDRT1-206ENST00000571263 FAM205AQ6ZU69 1335 aa14.39□□□□□ -0.11
CDRT1-206ENST00000571263 LTBP3Q9NS15 1303 aa14.39□□□□□ -0.11
CDRT1-206ENST00000571263 DUOX1Q9NRD9 1551 aa14.39□□□□□ -0.11
CDRT1-206ENST00000571263 CACNA1SQ13698 1873 aa14.38□□□□□ -0.11
CDRT1-206ENST00000571263 FKBP1AP62942 108 aaKnown RBP14.38□□□□□ -0.11
CDRT1-206ENST00000571263 KIAA1211Q6ZU35 1233 aa14.38□□□□□ -0.11
CDRT1-206ENST00000571263 ERICH6Q7L0X2 663 aa14.38□□□□□ -0.11
CDRT1-206ENST00000571263 ESYT1Q9BSJ8 1104 aa14.38□□□□□ -0.11
CDRT1-206ENST00000571263 SYT17Q9BSW7 474 aa14.38□□□□□ -0.11
CDRT1-206ENST00000571263 AK9Q5TCS8 1911 aa14.37□□□□□ -0.11
CDRT1-206ENST00000571263 PPIP5K2O43314 1243 aa14.37□□□□□ -0.11
CDRT1-206ENST00000571263 IDH1O75874 414 aaKnown RBP14.37□□□□□ -0.11
CDRT1-206ENST00000571263 MCMDC2Q4G0Z9 681 aa14.37□□□□□ -0.11
CDRT1-206ENST00000571263 OLFM4Q6UX06 510 aa14.37□□□□□ -0.11
CDRT1-206ENST00000571263 SLF2Q8IX21 1173 aa14.37□□□□□ -0.11
CDRT1-206ENST00000571263 APPBP2Q92624 585 aa14.37□□□□□ -0.11
CDRT1-206ENST00000571263 TAOK3Q9H2K8 898 aa14.37□□□□□ -0.11
CDRT1-206ENST00000571263 ANTXR1Q9H6X2 564 aa14.37□□□□□ -0.11
CDRT1-206ENST00000571263 BRCA1P38398 1863 aaKnown RBP14.37□□□□□ -0.11
CDRT1-206ENST00000571263 AKAP11Q9UKA4 1901 aa14.37□□□□□ -0.11
CDRT1-206ENST00000571263 SGSM2O43147 1006 aa14.36□□□□□ -0.11
CDRT1-206ENST00000571263 LDHCP07864 332 aa14.36□□□□□ -0.11
CDRT1-206ENST00000571263 ADD2P35612 726 aa14.36□□□□□ -0.11
CDRT1-206ENST00000571263 GSTO1P78417 241 aa14.36□□□□□ -0.11
CDRT1-206ENST00000571263 ZMYM1Q5SVZ6 1142 aa14.36□□□□□ -0.11
CDRT1-206ENST00000571263 SLC9C2Q5TAH2 1124 aa14.36□□□□□ -0.11
CDRT1-206ENST00000571263 CWC27Q6UX04 472 aaKnown RBP14.36□□□□□ -0.11
CDRT1-206ENST00000571263 CERS3Q8IU89 383 aa14.36□□□□□ -0.11
CDRT1-206ENST00000571263 NLGN2Q8NFZ4 835 aa14.36□□□□□ -0.11
CDRT1-206ENST00000571263 EDC3Q96F86 508 aaKnown RBP14.36□□□□□ -0.11
CDRT1-206ENST00000571263 PIH1D3Q9NQM4 214 aaKnown RBP14.36□□□□□ -0.11
CDRT1-206ENST00000571263 ABCF2Q9UG63 623 aa14.36□□□□□ -0.11
CDRT1-206ENST00000571263 IQSEC3Q9UPP2 1182 aaPredicted RBP14.36□□□□□ -0.11
CDRT1-206ENST00000571263 NDUFB9Q9Y6M9 179 aa14.36□□□□□ -0.11
CDRT1-206ENST00000571263 LDHBP07195 334 aaKnown RBP14.35□□□□□ -0.11
CDRT1-206ENST00000571263 IARSP41252 1262 aaKnown RBP14.35□□□□□ -0.11
CDRT1-206ENST00000571263 CHAF1AQ13111 956 aaPredicted RBP14.35□□□□□ -0.11
CDRT1-206ENST00000571263 NMIQ13287 307 aaPredicted RBP14.35□□□□□ -0.11
CDRT1-206ENST00000571263 STRIP1Q5VSL9 837 aa14.35□□□□□ -0.11
CDRT1-206ENST00000571263 TTLL5Q6EMB2 1281 aa14.35□□□□□ -0.11
CDRT1-206ENST00000571263 PI16Q6UXB8 463 aa14.35□□□□□ -0.11
CDRT1-206ENST00000571263 LARGE2Q8N3Y3 721 aa14.35□□□□□ -0.11
CDRT1-206ENST00000571263 RAI14Q9P0K7 980 aa14.35□□□□□ -0.11
CDRT1-206ENST00000571263 ECE2O60344 883 aa14.34□□□□□ -0.11
CDRT1-206ENST00000571263 MCCP23508 829 aa14.34□□□□□ -0.11
CDRT1-206ENST00000571263 MMP14P50281 582 aa14.34□□□□□ -0.11
CDRT1-206ENST00000571263 AOC3Q16853 763 aa14.34□□□□□ -0.11
CDRT1-206ENST00000571263 DOK7Q18PE1 504 aa14.34□□□□□ -0.11
CDRT1-206ENST00000571263 NIM1KQ8IY84 436 aa14.34□□□□□ -0.11
CDRT1-206ENST00000571263 IL27Q8NEV9 243 aa14.34□□□□□ -0.11
CDRT1-206ENST00000571263 JDP2Q8WYK2 163 aa14.34□□□□□ -0.11
CDRT1-206ENST00000571263 GPR101Q96P66 508 aaPredicted RBP14.34□□□□□ -0.11
CDRT1-206ENST00000571263 MRIQ9BWK5 157 aa14.34□□□□□ -0.11
CDRT1-206ENST00000571263 MAST3O60307 1309 aa14.34□□□□□ -0.11
CDRT1-206ENST00000571263 MYO3BQ8WXR4 1341 aa14.34□□□□□ -0.11
CDRT1-206ENST00000571263 USP17L3A6NCW0 530 aa14.33□□□□□ -0.12
CDRT1-206ENST00000571263 USP17L4A6NCW7 530 aa14.33□□□□□ -0.12
CDRT1-206ENST00000571263 PDE6AP16499 860 aa14.33□□□□□ -0.12
CDRT1-206ENST00000571263 GNAT2P19087 354 aa14.33□□□□□ -0.12
CDRT1-206ENST00000571263 GTF2IP78347 998 aa14.33□□□□□ -0.12
CDRT1-206ENST00000571263 NAA16Q6N069 864 aaPredicted RBP14.33□□□□□ -0.12
CDRT1-206ENST00000571263 USP17L1Q7RTZ2 530 aa14.33□□□□□ -0.12
CDRT1-206ENST00000571263 SLC51AQ86UW1 340 aa14.33□□□□□ -0.12
CDRT1-206ENST00000571263 DZIP1Q86YF9 867 aaKnown RBP14.33□□□□□ -0.12
CDRT1-206ENST00000571263 ZNRF3Q9ULT6 936 aa14.33□□□□□ -0.12
CDRT1-206ENST00000571263 ARFGEF1Q9Y6D6 1849 aa14.33□□□□□ -0.12
CDRT1-206ENST00000571263 MFSD14BQ5SR56 506 aa14.32□□□□□ -0.12
CDRT1-206ENST00000571263 MAGEB6Q8N7X4 407 aa14.32□□□□□ -0.12
CDRT1-206ENST00000571263 NSUN4Q96CB9 384 aaKnown RBP14.32□□□□□ -0.12
CDRT1-206ENST00000571263 FAM227BQ96M60 508 aa14.32□□□□□ -0.12
CDRT1-206ENST00000571263 DBNDD1Q9H9R9 158 aa14.32□□□□□ -0.12
CDRT1-206ENST00000571263 MYH13Q9UKX3 1938 aa14.32□□□□□ -0.12
CDRT1-206ENST00000571263 ZNF532Q9HCE3 1301 aa14.32□□□□□ -0.12
CDRT1-206ENST00000571263 RPAP1Q9BWH6 1393 aaPredicted RBP14.32□□□□□ -0.12
CDRT1-206ENST00000571263 TCRBV5S4A2TA0A5A2 114 aa14.31□□□□□ -0.12
CDRT1-206ENST00000571263 BAG3O95817 575 aa14.31□□□□□ -0.12
CDRT1-206ENST00000571263 CYP7A1P22680 504 aa14.31□□□□□ -0.12
CDRT1-206ENST00000571263 HDLBPQ00341 1268 aaKnown RBP14.31□□□□□ -0.12
CDRT1-206ENST00000571263 AIDAQ96BJ3 306 aa14.31□□□□□ -0.12
CDRT1-206ENST00000571263 FAM163AQ96GL9 167 aaPredicted RBP14.31□□□□□ -0.12
CDRT1-206ENST00000571263 NOL10Q9BSC4 688 aaKnown RBP14.31□□□□□ -0.12
CDRT1-206ENST00000571263 USP26Q9BXU7 913 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms