RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 ANKRD2Q9GZV1 360 aa20.74■□□□□ 0.91
RPAIN-208ENST00000571043 HMG20BQ9P0W2 317 aa20.74■□□□□ 0.91
RPAIN-208ENST00000571043 SLC27A2O14975 620 aa20.73■□□□□ 0.91
RPAIN-208ENST00000571043 TSGA10IPQ3SY00 556 aa20.73■□□□□ 0.91
RPAIN-208ENST00000571043 TNPO1Q92973 898 aaKnown RBP20.73■□□□□ 0.91
RPAIN-208ENST00000571043 SYT17Q9BSW7 474 aa20.73■□□□□ 0.91
RPAIN-208ENST00000571043 ZSWIM6Q9HCJ5 1215 aa20.73■□□□□ 0.91
RPAIN-208ENST00000571043 A0A1B0GUL6 1792 aa20.73■□□□□ 0.91
RPAIN-208ENST00000571043 PSMA5P28066 241 aa20.73■□□□□ 0.91
RPAIN-208ENST00000571043 HELBQ8NG08 1087 aaPredicted RBP20.73■□□□□ 0.91
RPAIN-208ENST00000571043 GBP4Q96PP9 640 aa20.73■□□□□ 0.91
RPAIN-208ENST00000571043 LRRC37AA6NMS7 1700 aa20.72■□□□□ 0.91
RPAIN-208ENST00000571043 RNF113AO15541 343 aaKnown RBP20.72■□□□□ 0.91
RPAIN-208ENST00000571043 ZMYM1Q5SVZ6 1142 aa20.72■□□□□ 0.91
RPAIN-208ENST00000571043 VPS53Q5VIR6 699 aa20.72■□□□□ 0.91
RPAIN-208ENST00000571043 U3KPZ7 1027 aaPredicted RBP20.72■□□□□ 0.91
RPAIN-208ENST00000571043 DDX11L8A8MPP1 907 aa20.71■□□□□ 0.91
RPAIN-208ENST00000571043 ZFYP08048 801 aaPredicted RBP20.71■□□□□ 0.91
RPAIN-208ENST00000571043 CASTP20810 708 aaKnown RBP20.71■□□□□ 0.91
RPAIN-208ENST00000571043 PUM3Q15397 648 aaKnown RBP20.71■□□□□ 0.91
RPAIN-208ENST00000571043 DALRD3Q5D0E6 543 aaKnown RBP20.71■□□□□ 0.91
RPAIN-208ENST00000571043 CC2D2BQ6DHV5 1058 aa20.71■□□□□ 0.91
RPAIN-208ENST00000571043 CLEC17AQ6ZS10 378 aa20.71■□□□□ 0.91
RPAIN-208ENST00000571043 SLC51AQ86UW1 340 aa20.71■□□□□ 0.91
RPAIN-208ENST00000571043 LPIN2Q92539 896 aa20.71■□□□□ 0.91
RPAIN-208ENST00000571043 JAKMIP1Q96N16 626 aaKnown RBP20.71■□□□□ 0.91
RPAIN-208ENST00000571043 PODXL2Q9NZ53 605 aa20.71■□□□□ 0.91
RPAIN-208ENST00000571043 CYP46A1Q9Y6A2 500 aa20.71■□□□□ 0.91
RPAIN-208ENST00000571043 CYP2E1P05181 493 aaPredicted RBP20.7■□□□□ 0.9
RPAIN-208ENST00000571043 FGFR2P21802 821 aa20.7■□□□□ 0.9
RPAIN-208ENST00000571043 ZGPATQ8N5A5 531 aaKnown RBP20.7■□□□□ 0.9
RPAIN-208ENST00000571043 TMX4Q9H1E5 349 aaPredicted RBP20.7■□□□□ 0.9
RPAIN-208ENST00000571043 GPSM2P81274 684 aa20.69■□□□□ 0.9
RPAIN-208ENST00000571043 FKBP4Q02790 459 aaKnown RBP eCLIP20.69■□□□□ 0.9
RPAIN-208ENST00000571043 UBE4AQ14139 1066 aa20.69■□□□□ 0.9
RPAIN-208ENST00000571043 KRT32Q14532 448 aa20.69■□□□□ 0.9
RPAIN-208ENST00000571043 RUFY3Q7L099 469 aa20.69■□□□□ 0.9
RPAIN-208ENST00000571043 PDRG1Q9NUG6 133 aa20.69■□□□□ 0.9
RPAIN-208ENST00000571043 ANKIB1Q9P2G1 1089 aa20.69■□□□□ 0.9
RPAIN-208ENST00000571043 NSFL1CQ9UNZ2 370 aaKnown RBP20.69■□□□□ 0.9
RPAIN-208ENST00000571043 LIMCH1Q9UPQ0 1083 aa20.69■□□□□ 0.9
RPAIN-208ENST00000571043 XDHP47989 1333 aa20.69■□□□□ 0.9
RPAIN-208ENST00000571043 RPAP1Q9BWH6 1393 aaPredicted RBP20.69■□□□□ 0.9
RPAIN-208ENST00000571043 UQCRFS1P1P0C7P4 283 aa20.68■□□□□ 0.9
RPAIN-208ENST00000571043 PTMSP20962 102 aa20.68■□□□□ 0.9
RPAIN-208ENST00000571043 AK2P54819 239 aa20.68■□□□□ 0.9
RPAIN-208ENST00000571043 ADCK5Q3MIX3 580 aa20.68■□□□□ 0.9
RPAIN-208ENST00000571043 OLFM4Q6UX06 510 aa20.68■□□□□ 0.9
RPAIN-208ENST00000571043 DSCC1Q9BVC3 393 aa20.68■□□□□ 0.9
RPAIN-208ENST00000571043 LEMD3Q9Y2U8 911 aa20.68■□□□□ 0.9
RPAIN-208ENST00000571043 SNAP23O00161 211 aa20.68■□□□□ 0.9
RPAIN-208ENST00000571043 C21orf2O43822 256 aa20.68■□□□□ 0.9
RPAIN-208ENST00000571043 GRIPAP1Q4V328 841 aa20.68■□□□□ 0.9
RPAIN-208ENST00000571043 SEC62Q99442 399 aaKnown RBP20.68■□□□□ 0.9
RPAIN-208ENST00000571043 ALDH8A1Q9H2A2 487 aaPredicted RBP20.68■□□□□ 0.9
RPAIN-208ENST00000571043 LTBP1Q14766 1721 aa20.67■□□□□ 0.9
RPAIN-208ENST00000571043 WTIPA6NIX2 430 aaPredicted RBP20.67■□□□□ 0.9
RPAIN-208ENST00000571043 SLC5A1P13866 664 aa20.67■□□□□ 0.9
RPAIN-208ENST00000571043 ARID4AP29374 1257 aaPredicted RBP20.67■□□□□ 0.9
RPAIN-208ENST00000571043 ZAP70P43403 619 aa20.67■□□□□ 0.9
RPAIN-208ENST00000571043 SCARF1Q14162 830 aa20.67■□□□□ 0.9
RPAIN-208ENST00000571043 CCDC129Q6ZRS4 1044 aa20.67■□□□□ 0.9
RPAIN-208ENST00000571043 MPNDQ8N594 471 aa20.67■□□□□ 0.9
RPAIN-208ENST00000571043 ZSCAN31Q96LW9 406 aaPredicted RBP20.67■□□□□ 0.9
RPAIN-208ENST00000571043 ZNF219Q9P2Y4 722 aaPredicted RBP20.67■□□□□ 0.9
RPAIN-208ENST00000571043 ZNF804BA4D1E1 1349 aa20.66■□□□□ 0.9
RPAIN-208ENST00000571043 ARFGEF1Q9Y6D6 1849 aa20.66■□□□□ 0.9
RPAIN-208ENST00000571043 CHGBP05060 677 aa20.66■□□□□ 0.9
RPAIN-208ENST00000571043 ATP2B4P23634 1241 aa20.66■□□□□ 0.9
RPAIN-208ENST00000571043 TTF1Q15361 905 aaPredicted RBP20.66■□□□□ 0.9
RPAIN-208ENST00000571043 SOGA3Q5TF21 947 aa20.66■□□□□ 0.9
RPAIN-208ENST00000571043 SNED1Q8TER0 1413 aa20.65■□□□□ 0.9
RPAIN-208ENST00000571043 DEKP35659 375 aaKnown RBP20.65■□□□□ 0.9
RPAIN-208ENST00000571043 MCAMP43121 646 aa20.65■□□□□ 0.9
RPAIN-208ENST00000571043 CCDC102BQ68D86 513 aa20.65■□□□□ 0.9
RPAIN-208ENST00000571043 NOL8Q76FK4 1167 aaKnown RBP20.65■□□□□ 0.9
RPAIN-208ENST00000571043 TBC1D16Q8TBP0 767 aa20.65■□□□□ 0.9
RPAIN-208ENST00000571043 POLLQ9UGP5 575 aa20.65■□□□□ 0.9
RPAIN-208ENST00000571043 GGA1Q9UJY5 639 aa20.65■□□□□ 0.9
RPAIN-208ENST00000571043 WWC3Q9ULE0 1092 aa20.65■□□□□ 0.9
RPAIN-208ENST00000571043 BCS1LQ9Y276 419 aa20.65■□□□□ 0.9
RPAIN-208ENST00000571043 MAST3O60307 1309 aa20.64■□□□□ 0.9
RPAIN-208ENST00000571043 ANKRD1Q15327 319 aa20.64■□□□□ 0.9
RPAIN-208ENST00000571043 ZSCAN25Q6NSZ9 544 aa20.64■□□□□ 0.9
RPAIN-208ENST00000571043 BLOC1S2Q6QNY1 142 aa20.64■□□□□ 0.9
RPAIN-208ENST00000571043 DPP8Q6V1X1 898 aaPredicted RBP20.64■□□□□ 0.9
RPAIN-208ENST00000571043 RTKN2Q8IZC4 609 aa20.64■□□□□ 0.9
RPAIN-208ENST00000571043 SH2B1Q9NRF2 756 aaPredicted RBP20.64■□□□□ 0.9
RPAIN-208ENST00000571043 CPA1P15085 419 aa20.63■□□□□ 0.89
RPAIN-208ENST00000571043 GSE1Q14687 1217 aa20.63■□□□□ 0.89
RPAIN-208ENST00000571043 CCDC93Q567U6 631 aa20.63■□□□□ 0.89
RPAIN-208ENST00000571043 C15orf52Q6ZUT6 534 aaKnown RBP20.63■□□□□ 0.89
RPAIN-208ENST00000571043 APPBP2Q92624 585 aa20.63■□□□□ 0.89
RPAIN-208ENST00000571043 RTFDC1Q9BY42 306 aaPredicted RBP20.63■□□□□ 0.89
RPAIN-208ENST00000571043 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.63■□□□□ 0.89
RPAIN-208ENST00000571043 IRS2Q9Y4H2 1338 aa20.63■□□□□ 0.89
RPAIN-208ENST00000571043 UFL1O94874 794 aa20.63■□□□□ 0.89
RPAIN-208ENST00000571043 RPS6KB1P23443 525 aa20.63■□□□□ 0.89
RPAIN-208ENST00000571043 FER1L6Q2WGJ9 1857 aa20.62■□□□□ 0.89
RPAIN-208ENST00000571043 C6orf229H3BNL8 230 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 398.5 ms