RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 PUM3Q15397 648 aaKnown RBP15.78■□□□□ 0.12
TVP23B-204ENST00000571018 FBXO33Q7Z6M2 555 aa15.78■□□□□ 0.12
TVP23B-204ENST00000571018 OGFOD1Q8N543 542 aa15.78■□□□□ 0.12
TVP23B-204ENST00000571018 KLRG1Q96E93 195 aa15.78■□□□□ 0.12
TVP23B-204ENST00000571018 GLIS2Q9BZE0 524 aaPredicted RBP15.78■□□□□ 0.12
TVP23B-204ENST00000571018 SIL1Q9H173 461 aa15.78■□□□□ 0.12
TVP23B-204ENST00000571018 MYOZ2Q9NPC6 264 aa15.78■□□□□ 0.12
TVP23B-204ENST00000571018 RCAN3Q9UKA8 241 aa15.78■□□□□ 0.12
TVP23B-204ENST00000571018 PA2G4Q9UQ80 394 aaKnown RBP15.78■□□□□ 0.12
TVP23B-204ENST00000571018 TRAF5O00463 557 aa15.77■□□□□ 0.12
TVP23B-204ENST00000571018 ZBTB7BO15156 539 aaPredicted RBP15.77■□□□□ 0.12
TVP23B-204ENST00000571018 IFIT1P09914 478 aaKnown RBP15.77■□□□□ 0.12
TVP23B-204ENST00000571018 IL15P40933 162 aaPredicted RBP15.77■□□□□ 0.12
TVP23B-204ENST00000571018 FMR1Q06787 632 aaKnown RBP eCLIP15.77■□□□□ 0.12
TVP23B-204ENST00000571018 CAVIN4Q5BKX8 364 aa15.77■□□□□ 0.12
TVP23B-204ENST00000571018 ITPRIPQ8IWB1 547 aa15.77■□□□□ 0.12
TVP23B-204ENST00000571018 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
TVP23B-204ENST00000571018 FAM205AQ6ZU69 1335 aa15.76■□□□□ 0.11
TVP23B-204ENST00000571018 MS4A1P11836 297 aa15.76■□□□□ 0.11
TVP23B-204ENST00000571018 KIAA0825Q8IV33 1275 aa15.76■□□□□ 0.11
TVP23B-204ENST00000571018 CERS5Q8N5B7 392 aa15.76■□□□□ 0.11
TVP23B-204ENST00000571018 LPIN2Q92539 896 aa15.76■□□□□ 0.11
TVP23B-204ENST00000571018 DCPSQ96C86 337 aaKnown RBP15.76■□□□□ 0.11
TVP23B-204ENST00000571018 CEP126Q9P2H0 1117 aa15.76■□□□□ 0.11
TVP23B-204ENST00000571018 HDAC9Q9UKV0 1011 aa15.76■□□□□ 0.11
TVP23B-204ENST00000571018 PNMA6EA0A0J9YXQ4 647 aa15.75■□□□□ 0.11
TVP23B-204ENST00000571018 SCARF1Q14162 830 aa15.75■□□□□ 0.11
TVP23B-204ENST00000571018 CST9Q5W186 159 aa15.75■□□□□ 0.11
TVP23B-204ENST00000571018 USP48Q86UV5 1035 aa15.75■□□□□ 0.11
TVP23B-204ENST00000571018 VPS37DQ86XT2 251 aa15.75■□□□□ 0.11
TVP23B-204ENST00000571018 PANK1Q8TE04 598 aa15.75■□□□□ 0.11
TVP23B-204ENST00000571018 GGA3Q9NZ52 723 aa15.75■□□□□ 0.11
TVP23B-204ENST00000571018 ASTN2O75129 1339 aaPredicted RBP15.74■□□□□ 0.11
TVP23B-204ENST00000571018 SLC5A1P13866 664 aa15.74■□□□□ 0.11
TVP23B-204ENST00000571018 BCAMP50895 628 aa15.74■□□□□ 0.11
TVP23B-204ENST00000571018 KRT26Q7Z3Y9 468 aa15.74■□□□□ 0.11
TVP23B-204ENST00000571018 JMYQ8N9B5 988 aa15.74■□□□□ 0.11
TVP23B-204ENST00000571018 WNT10BO00744 389 aa15.73■□□□□ 0.11
TVP23B-204ENST00000571018 ATP8B2P98198 1209 aa15.73■□□□□ 0.11
TVP23B-204ENST00000571018 ATP2B3Q16720 1220 aa15.73■□□□□ 0.11
TVP23B-204ENST00000571018 NBPF9Q3BBW0 867 aa15.73■□□□□ 0.11
TVP23B-204ENST00000571018 ANGEL2Q5VTE6 544 aaKnown RBP15.73■□□□□ 0.11
TVP23B-204ENST00000571018 SULF1Q8IWU6 871 aa15.73■□□□□ 0.11
TVP23B-204ENST00000571018 JAG2Q9Y219 1238 aa15.73■□□□□ 0.11
TVP23B-204ENST00000571018 PITPNM2Q9BZ72 1349 aa15.72■□□□□ 0.11
TVP23B-204ENST00000571018 RASSF10A6NK89 507 aa15.72■□□□□ 0.11
TVP23B-204ENST00000571018 CELF2O95319 508 aaKnown RBP15.72■□□□□ 0.11
TVP23B-204ENST00000571018 MFSD14BQ5SR56 506 aa15.72■□□□□ 0.11
TVP23B-204ENST00000571018 SSH3Q8TE77 659 aa15.72■□□□□ 0.11
TVP23B-204ENST00000571018 ZBED3Q96IU2 234 aaPredicted RBP15.72■□□□□ 0.11
TVP23B-204ENST00000571018 MKRN1Q9UHC7 482 aaKnown RBP15.72■□□□□ 0.11
TVP23B-204ENST00000571018 IQSEC3Q9UPP2 1182 aaPredicted RBP15.72■□□□□ 0.11
TVP23B-204ENST00000571018 CNTNAP1P78357 1384 aa15.72■□□□□ 0.11
TVP23B-204ENST00000571018 ADM5C9JUS6 153 aa15.71■□□□□ 0.11
TVP23B-204ENST00000571018 F8W031 263 aaPredicted RBP15.71■□□□□ 0.11
TVP23B-204ENST00000571018 FRAT2O75474 233 aaPredicted RBP15.71■□□□□ 0.11
TVP23B-204ENST00000571018 DLK2Q6UY11 383 aa15.71■□□□□ 0.11
TVP23B-204ENST00000571018 MTMR14Q8NCE2 650 aa15.71■□□□□ 0.11
TVP23B-204ENST00000571018 C1orf115Q9H7X2 142 aa15.71■□□□□ 0.11
TVP23B-204ENST00000571018 ABT1Q9ULW3 272 aaKnown RBP15.71■□□□□ 0.11
TVP23B-204ENST00000571018 TRPM7Q96QT4 1865 aa15.7■□□□□ 0.1
TVP23B-204ENST00000571018 TFCP2Q12800 502 aa15.7■□□□□ 0.1
TVP23B-204ENST00000571018 MVPQ14764 893 aaKnown RBP15.7■□□□□ 0.1
TVP23B-204ENST00000571018 DLGAP5Q15398 846 aa15.7■□□□□ 0.1
TVP23B-204ENST00000571018 DEFB115Q30KQ5 88 aa15.7■□□□□ 0.1
TVP23B-204ENST00000571018 TBC1D22AQ8WUA7 517 aa15.7■□□□□ 0.1
TVP23B-204ENST00000571018 ZNF408Q9H9D4 720 aa15.7■□□□□ 0.1
TVP23B-204ENST00000571018 AKAP2Q9Y2D5 859 aa15.7■□□□□ 0.1
TVP23B-204ENST00000571018 TLL2Q9Y6L7 1015 aa15.7■□□□□ 0.1
TVP23B-204ENST00000571018 CHAF1AQ13111 956 aaPredicted RBP15.69■□□□□ 0.1
TVP23B-204ENST00000571018 G3BP1Q13283 466 aaKnown RBP eCLIP15.69■□□□□ 0.1
TVP23B-204ENST00000571018 DDX19BQ9UMR2 479 aa15.69■□□□□ 0.1
TVP23B-204ENST00000571018 COG6Q9Y2V7 657 aa15.69■□□□□ 0.1
TVP23B-204ENST00000571018 A0A1B0GUL7 405 aa15.68■□□□□ 0.1
TVP23B-204ENST00000571018 VEGFBP49765 207 aa15.68■□□□□ 0.1
TVP23B-204ENST00000571018 TIMM10P62072 90 aa15.68■□□□□ 0.1
TVP23B-204ENST00000571018 PDE3AQ14432 1141 aa15.68■□□□□ 0.1
TVP23B-204ENST00000571018 CFAP100Q494V2 611 aa15.68■□□□□ 0.1
TVP23B-204ENST00000571018 SAPCD2Q86UD0 394 aa15.68■□□□□ 0.1
TVP23B-204ENST00000571018 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.68■□□□□ 0.1
TVP23B-204ENST00000571018 CDCA5Q96FF9 252 aa15.68■□□□□ 0.1
TVP23B-204ENST00000571018 GNL3LQ9NVN8 582 aaKnown RBP15.68■□□□□ 0.1
TVP23B-204ENST00000571018 TTF2Q9UNY4 1162 aaKnown RBP15.68■□□□□ 0.1
TVP23B-204ENST00000571018 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.68■□□□□ 0.1
TVP23B-204ENST00000571018 POLR2AP24928 1970 aaKnown RBP15.67■□□□□ 0.1
TVP23B-204ENST00000571018 SEMA3EO15041 775 aa15.67■□□□□ 0.1
TVP23B-204ENST00000571018 ADORA1P30542 326 aa15.67■□□□□ 0.1
TVP23B-204ENST00000571018 PHKA1P46020 1223 aa15.67■□□□□ 0.1
TVP23B-204ENST00000571018 GRIK5Q16478 980 aa15.67■□□□□ 0.1
TVP23B-204ENST00000571018 CCDC102BQ68D86 513 aa15.67■□□□□ 0.1
TVP23B-204ENST00000571018 CEP85Q6P2H3 762 aa15.67■□□□□ 0.1
TVP23B-204ENST00000571018 SPDYE1Q8NFV5 336 aaPredicted RBP15.67■□□□□ 0.1
TVP23B-204ENST00000571018 HHIPL1Q96JK4 782 aa15.67■□□□□ 0.1
TVP23B-204ENST00000571018 PRMT6Q96LA8 375 aaPredicted RBP15.67■□□□□ 0.1
TVP23B-204ENST00000571018 SERPINA10Q9UK55 444 aa15.67■□□□□ 0.1
TVP23B-204ENST00000571018 NOP58Q9Y2X3 529 aaKnown RBP15.67■□□□□ 0.1
TVP23B-204ENST00000571018 SUGT1Q9Y2Z0 365 aa15.67■□□□□ 0.1
TVP23B-204ENST00000571018 PCDHAC2Q9Y5I4 1007 aa15.67■□□□□ 0.1
TVP23B-204ENST00000571018 SURF6O75683 361 aaKnown RBP15.66■□□□□ 0.1
TVP23B-204ENST00000571018 HDLBPQ00341 1268 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms