RNA–Protein interactions for RNA: ENST00000570626.1

RBFOX1-221, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-221ENST00000570626 SYN1P17600 705 aa12.79□□□□□ -0.36
RBFOX1-221ENST00000570626 TAF7Q15545 349 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-221ENST00000570626 AMER1Q5JTC6 1135 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-221ENST00000570626 PODNQ7Z5L7 613 aa12.79□□□□□ -0.36
RBFOX1-221ENST00000570626 RAET1EQ8TD07 263 aa12.79□□□□□ -0.36
RBFOX1-221ENST00000570626 TRIM47Q96LD4 638 aa12.79□□□□□ -0.36
RBFOX1-221ENST00000570626 BIN2Q9UBW5 565 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-221ENST00000570626 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
RBFOX1-221ENST00000570626 ECM29Q5VYK3 1845 aa12.78□□□□□ -0.36
RBFOX1-221ENST00000570626 COL2A1P02458 1487 aaPredicted RBP12.78□□□□□ -0.36
RBFOX1-221ENST00000570626 CDH23Q9H251 3354 aa12.78□□□□□ -0.36
RBFOX1-221ENST00000570626 OSBPP22059 807 aa12.78□□□□□ -0.36
RBFOX1-221ENST00000570626 IREB2P48200 963 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-221ENST00000570626 RPS8P62241 208 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-221ENST00000570626 UBXN2AP68543 259 aa12.78□□□□□ -0.36
RBFOX1-221ENST00000570626 ANKRD13AQ8IZ07 590 aa12.78□□□□□ -0.36
RBFOX1-221ENST00000570626 PAWRQ96IZ0 340 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-221ENST00000570626 UBE2OQ9C0C9 1292 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-221ENST00000570626 RSPH6AQ9H0K4 717 aa12.78□□□□□ -0.36
RBFOX1-221ENST00000570626 EIF4A1P60842 406 aaKnown RBP12.77□□□□□ -0.37
RBFOX1-221ENST00000570626 MAP3K12Q12852 859 aa12.77□□□□□ -0.37
RBFOX1-221ENST00000570626 PDIA6Q15084 440 aa12.77□□□□□ -0.37
RBFOX1-221ENST00000570626 PROSER3Q2NL68 480 aa12.77□□□□□ -0.37
RBFOX1-221ENST00000570626 HSP90AB3PQ58FF7 597 aa12.77□□□□□ -0.37
RBFOX1-221ENST00000570626 NBPF12Q5TAG4 269 aaPredicted RBP12.77□□□□□ -0.37
RBFOX1-221ENST00000570626 DIS3LQ8TF46 1054 aaKnown RBP12.77□□□□□ -0.37
RBFOX1-221ENST00000570626 FBXW7Q969H0 707 aa12.77□□□□□ -0.37
RBFOX1-221ENST00000570626 PPP2R3BQ9Y5P8 575 aa12.77□□□□□ -0.37
RBFOX1-221ENST00000570626 ANXA1P04083 346 aa12.76□□□□□ -0.37
RBFOX1-221ENST00000570626 PSMC4P43686 418 aa12.76□□□□□ -0.37
RBFOX1-221ENST00000570626 CDX2Q99626 313 aaPredicted RBP12.76□□□□□ -0.37
RBFOX1-221ENST00000570626 MYPNQ86TC9 1320 aa12.76□□□□□ -0.37
RBFOX1-221ENST00000570626 MYO3BQ8WXR4 1341 aa12.76□□□□□ -0.37
RBFOX1-221ENST00000570626 ZNF804BA4D1E1 1349 aa12.75□□□□□ -0.37
RBFOX1-221ENST00000570626 TFRCP02786 760 aaKnown RBP12.75□□□□□ -0.37
RBFOX1-221ENST00000570626 GTF2A2P52657 109 aa12.75□□□□□ -0.37
RBFOX1-221ENST00000570626 SUPT20HL1Q3ZLR7 823 aa12.75□□□□□ -0.37
RBFOX1-221ENST00000570626 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
RBFOX1-221ENST00000570626 FAM89AQ96GI7 184 aa12.75□□□□□ -0.37
RBFOX1-221ENST00000570626 SYNGAP1Q96PV0 1343 aa12.75□□□□□ -0.37
RBFOX1-221ENST00000570626 SEC31BQ9NQW1 1179 aa12.75□□□□□ -0.37
RBFOX1-221ENST00000570626 TRIM26Q12899 539 aaPredicted RBP12.74□□□□□ -0.37
RBFOX1-221ENST00000570626 STRIP1Q5VSL9 837 aa12.74□□□□□ -0.37
RBFOX1-221ENST00000570626 KIAA0825Q8IV33 1275 aa12.74□□□□□ -0.37
RBFOX1-221ENST00000570626 SNX27Q96L92 541 aa12.74□□□□□ -0.37
RBFOX1-221ENST00000570626 DEFB118Q96PH6 123 aa12.74□□□□□ -0.37
RBFOX1-221ENST00000570626 XDHP47989 1333 aa12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 BTBD19C9JJ37 291 aa12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 WDHD1O75717 1129 aaPredicted RBP12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 FMNL1O95466 1100 aaPredicted RBP12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 HOXD10P28358 340 aa12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 PRKCZQ05513 592 aa12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 TJAP1Q5JTD0 557 aa12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 ZNF697Q5TEC3 545 aa12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 C17orf99Q6UX52 265 aa12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 NECAB2Q7Z6G3 386 aa12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 SLAIN1Q8ND83 568 aa12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 CRISPLD2Q9H0B8 497 aa12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 CPA4Q9UI42 421 aa12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 PCDHAC2Q9Y5I4 1007 aa12.73□□□□□ -0.37
RBFOX1-221ENST00000570626 MED23Q9ULK4 1368 aa12.72□□□□□ -0.37
RBFOX1-221ENST00000570626 FAM205AQ6ZU69 1335 aa12.72□□□□□ -0.37
RBFOX1-221ENST00000570626 ADGRA2Q96PE1 1338 aa12.72□□□□□ -0.37
RBFOX1-221ENST00000570626 CLRN2A0PK11 232 aa12.72□□□□□ -0.37
RBFOX1-221ENST00000570626 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-221ENST00000570626 MMP14P50281 582 aa12.72□□□□□ -0.37
RBFOX1-221ENST00000570626 AIMP1Q12904 312 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-221ENST00000570626 RTL5Q5HYW3 569 aaPredicted RBP12.72□□□□□ -0.37
RBFOX1-221ENST00000570626 COPS6Q7L5N1 327 aa12.72□□□□□ -0.37
RBFOX1-221ENST00000570626 AOX1Q06278 1338 aa12.71□□□□□ -0.37
RBFOX1-221ENST00000570626 VGLL4Q14135 290 aa12.71□□□□□ -0.37
RBFOX1-221ENST00000570626 XAGE3Q8WTP9 111 aa12.71□□□□□ -0.37
RBFOX1-221ENST00000570626 MYLIPQ8WY64 445 aa12.71□□□□□ -0.37
RBFOX1-221ENST00000570626 ZCCHC17Q9NP64 241 aaKnown RBP12.71□□□□□ -0.37
RBFOX1-221ENST00000570626 PAK6Q9NQU5 681 aaPredicted RBP12.71□□□□□ -0.37
RBFOX1-221ENST00000570626 GABRQQ9UN88 632 aa12.71□□□□□ -0.37
RBFOX1-221ENST00000570626 MGAMO43451 1857 aa12.71□□□□□ -0.37
RBFOX1-221ENST00000570626 BDP1A6H8Y1 2624 aa12.71□□□□□ -0.38
RBFOX1-221ENST00000570626 DDX60LQ5H9U9 1706 aaKnown RBP12.71□□□□□ -0.38
RBFOX1-221ENST00000570626 INHAP05111 366 aa12.7□□□□□ -0.38
RBFOX1-221ENST00000570626 CAPN2P17655 700 aa12.7□□□□□ -0.38
RBFOX1-221ENST00000570626 ATP2B4P23634 1241 aa12.7□□□□□ -0.38
RBFOX1-221ENST00000570626 DLGAP5Q15398 846 aa12.7□□□□□ -0.38
RBFOX1-221ENST00000570626 HELBQ8NG08 1087 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-221ENST00000570626 PNISRQ8TF01 805 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-221ENST00000570626 VEZTQ9HBM0 779 aa12.7□□□□□ -0.38
RBFOX1-221ENST00000570626 PIEZO1Q92508 2521 aa12.69□□□□□ -0.38
RBFOX1-221ENST00000570626 IRS4O14654 1257 aaPredicted RBP12.69□□□□□ -0.38
RBFOX1-221ENST00000570626 CETPP11597 493 aa12.69□□□□□ -0.38
RBFOX1-221ENST00000570626 ELNP15502 786 aa12.69□□□□□ -0.38
RBFOX1-221ENST00000570626 EIF2S2P20042 333 aaKnown RBP12.69□□□□□ -0.38
RBFOX1-221ENST00000570626 RASA3Q14644 834 aa12.69□□□□□ -0.38
RBFOX1-221ENST00000570626 DLG5Q8TDM6 1919 aa12.68□□□□□ -0.38
RBFOX1-221ENST00000570626 ADCY3O60266 1144 aa12.68□□□□□ -0.38
RBFOX1-221ENST00000570626 CDAN1Q8IWY9 1227 aa12.68□□□□□ -0.38
RBFOX1-221ENST00000570626 MTMR14Q8NCE2 650 aa12.68□□□□□ -0.38
RBFOX1-221ENST00000570626 SEMA6BQ9H3T3 888 aa12.68□□□□□ -0.38
RBFOX1-221ENST00000570626 SPEF2Q9C093 1822 aa12.67□□□□□ -0.38
RBFOX1-221ENST00000570626 SPDYE5A6NIY4 337 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms