RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 ENOX2Q16206 610 aaKnown RBP9.57□□□□□ -0.88
TCF4-246ENST00000570287 ESCO1Q5FWF5 840 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 INPP5FQ9Y2H2 1132 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 NPHP4O75161 1426 aaPredicted RBP9.57□□□□□ -0.88
TCF4-246ENST00000570287 PXDNLA1KZ92 1463 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 CEMIPQ8WUJ3 1361 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 FMNL1O95466 1100 aaPredicted RBP9.57□□□□□ -0.88
TCF4-246ENST00000570287 FDX1P10109 184 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 ZNF76P36508 570 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 XPCQ01831 940 aaPredicted RBP9.57□□□□□ -0.88
TCF4-246ENST00000570287 LARP1Q6PKG0 1096 aaKnown RBP9.57□□□□□ -0.88
TCF4-246ENST00000570287 SLC43A3Q8NBI5 491 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 MYRIPQ8NFW9 859 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 THRAP3Q9Y2W1 955 aaKnown RBP9.57□□□□□ -0.88
TCF4-246ENST00000570287 CCDC189A1A4V9 331 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 GNAI3P08754 354 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 C16orf71Q8IYS4 520 aaPredicted RBP9.57□□□□□ -0.88
TCF4-246ENST00000570287 KIF2CQ99661 725 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 FAM198AQ9UFP1 575 aa9.57□□□□□ -0.88
TCF4-246ENST00000570287 KIF4AO95239 1232 aa9.56□□□□□ -0.88
TCF4-246ENST00000570287 HSD3B2P26439 372 aa9.56□□□□□ -0.88
TCF4-246ENST00000570287 FKBP5Q13451 457 aaPredicted RBP9.56□□□□□ -0.88
TCF4-246ENST00000570287 BIRC2Q13490 618 aa9.56□□□□□ -0.88
TCF4-246ENST00000570287 PRPF38BQ5VTL8 546 aaKnown RBP9.56□□□□□ -0.88
TCF4-246ENST00000570287 VTI1BQ9UEU0 232 aa9.56□□□□□ -0.88
TCF4-246ENST00000570287 MED1Q15648 1581 aaPredicted RBP9.56□□□□□ -0.88
TCF4-246ENST00000570287 LZTS3O60299 673 aaPredicted RBP9.56□□□□□ -0.88
TCF4-246ENST00000570287 IER2Q9BTL4 223 aa9.56□□□□□ -0.88
TCF4-246ENST00000570287 KAT6BQ8WYB5 2073 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 TAF3Q5VWG9 929 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 NBPF6Q5VWK0 638 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 USHBP1Q8N6Y0 703 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 NBPF4Q96M43 638 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 NAA30Q147X3 362 aaPredicted RBP9.55□□□□□ -0.88
TCF4-246ENST00000570287 SLAIN1Q8ND83 568 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 OSBPL3Q9H4L5 887 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 SLIT3O75094 1523 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 HOXB7P09629 217 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 LONRF3Q496Y0 759 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 MAP9Q49MG5 647 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 ODR4Q5SWX8 454 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 CASC1Q6TDU7 716 aa9.55□□□□□ -0.88
TCF4-246ENST00000570287 CXXC1Q9P0U4 656 aaPredicted RBP9.55□□□□□ -0.88
TCF4-246ENST00000570287 LMO7Q8WWI1 1683 aa9.54□□□□□ -0.88
TCF4-246ENST00000570287 ARID5AQ03989 594 aa9.54□□□□□ -0.88
TCF4-246ENST00000570287 OTUD7AQ8TE49 926 aaPredicted RBP9.54□□□□□ -0.88
TCF4-246ENST00000570287 NCAPD2Q15021 1401 aa9.54□□□□□ -0.88
TCF4-246ENST00000570287 KDM3BQ7LBC6 1761 aa9.54□□□□□ -0.88
TCF4-246ENST00000570287 ZSCAN23Q3MJ62 389 aa9.54□□□□□ -0.88
TCF4-246ENST00000570287 TAS1R3Q7RTX0 852 aa9.54□□□□□ -0.88
TCF4-246ENST00000570287 RBSNQ9H1K0 784 aa9.54□□□□□ -0.88
TCF4-246ENST00000570287 NLRP2Q9NX02 1062 aa9.54□□□□□ -0.88
TCF4-246ENST00000570287 SORBS3O60504 671 aa9.53□□□□□ -0.88
TCF4-246ENST00000570287 LDHBP07195 334 aaKnown RBP9.53□□□□□ -0.88
TCF4-246ENST00000570287 SDSP20132 328 aa9.53□□□□□ -0.88
TCF4-246ENST00000570287 ATP8B2P98198 1209 aa9.53□□□□□ -0.88
TCF4-246ENST00000570287 OS9Q13438 667 aaPredicted RBP9.53□□□□□ -0.88
TCF4-246ENST00000570287 AKAP4Q5JQC9 854 aa9.53□□□□□ -0.88
TCF4-246ENST00000570287 CCDC39Q9UFE4 941 aa9.53□□□□□ -0.88
TCF4-246ENST00000570287 BAG4O95429 457 aaKnown RBP9.53□□□□□ -0.88
TCF4-246ENST00000570287 GCP02774 474 aa9.53□□□□□ -0.88
TCF4-246ENST00000570287 HMGN5P82970 282 aaKnown RBP9.53□□□□□ -0.88
TCF4-246ENST00000570287 AMOTQ4VCS5 1084 aa9.53□□□□□ -0.88
TCF4-246ENST00000570287 PLEKHO1Q53GL0 409 aaPredicted RBP9.53□□□□□ -0.88
TCF4-246ENST00000570287 ARHGEF25Q86VW2 580 aa9.53□□□□□ -0.88
TCF4-246ENST00000570287 EGFL7Q9UHF1 273 aa9.53□□□□□ -0.88
TCF4-246ENST00000570287 GOLGA6L22H0YM25 854 aa9.53□□□□□ -0.88
TCF4-246ENST00000570287 K7ELQ4 463 aaPredicted RBP9.53□□□□□ -0.88
TCF4-246ENST00000570287 CYP2E1P05181 493 aaPredicted RBP9.53□□□□□ -0.88
TCF4-246ENST00000570287 EIF4A1P60842 406 aaKnown RBP9.53□□□□□ -0.88
TCF4-246ENST00000570287 PDCD7Q8N8D1 485 aaKnown RBP9.53□□□□□ -0.88
TCF4-246ENST00000570287 RGPD2P0DJD1 1756 aa9.52□□□□□ -0.88
TCF4-246ENST00000570287 OVOS2A0A0G2JMS6 1433 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 KDM4FA0A1W2PPD8 638 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 CCDC85CA6NKD9 419 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 TNFRSF10BO14763 440 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 FGRP09769 529 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 RABEP1Q15276 862 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 SWI5Q1ZZU3 235 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 USP26Q9BXU7 913 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 MAF1Q9H063 256 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 KIF1AQ12756 1690 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 PDE1AP54750 535 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 C4orf46Q504U0 113 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 ORAI2Q96SN7 254 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 LRRCC1Q9C099 1032 aa9.52□□□□□ -0.89
TCF4-246ENST00000570287 DDX49Q9Y6V7 483 aaKnown RBP9.52□□□□□ -0.89
TCF4-246ENST00000570287 TRPM3Q9HCF6 1732 aaPredicted RBP9.52□□□□□ -0.89
TCF4-246ENST00000570287 RNPC3Q96LT9 517 aaKnown RBP9.51□□□□□ -0.89
TCF4-246ENST00000570287 CARD10Q9BWT7 1032 aa9.51□□□□□ -0.89
TCF4-246ENST00000570287 LGR6Q9HBX8 967 aa9.51□□□□□ -0.89
TCF4-246ENST00000570287 CAMTA1Q9Y6Y1 1673 aa9.51□□□□□ -0.89
TCF4-246ENST00000570287 MST1RQ04912 1400 aa9.51□□□□□ -0.89
TCF4-246ENST00000570287 SALL3Q9BXA9 1300 aa9.51□□□□□ -0.89
TCF4-246ENST00000570287 NBPF20Q3BBV1 942 aa9.51□□□□□ -0.89
TCF4-246ENST00000570287 ZNF530Q6P9A1 599 aaPredicted RBP9.51□□□□□ -0.89
TCF4-246ENST00000570287 FAM126AQ9BYI3 521 aaPredicted RBP9.51□□□□□ -0.89
TCF4-246ENST00000570287 USP44Q9H0E7 712 aa9.51□□□□□ -0.89
TCF4-246ENST00000570287 LMBRD1Q9NUN5 540 aa9.51□□□□□ -0.89
TCF4-246ENST00000570287 GNL3LQ9NVN8 582 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms