RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 BAG6P46379 1132 aa12.34□□□□□ -0.43
GDE1-205ENST00000569899 PTPN12Q05209 780 aaKnown RBP12.34□□□□□ -0.43
GDE1-205ENST00000569899 SF3B2Q13435 895 aaKnown RBP12.34□□□□□ -0.43
GDE1-205ENST00000569899 OS9Q13438 667 aaPredicted RBP12.34□□□□□ -0.43
GDE1-205ENST00000569899 CARMIL3Q8ND23 1372 aa12.34□□□□□ -0.43
GDE1-205ENST00000569899 ANKRD31Q8N7Z5 1873 aa12.34□□□□□ -0.43
GDE1-205ENST00000569899 PDE8AO60658 829 aa12.33□□□□□ -0.43
GDE1-205ENST00000569899 RAB11FIP3O75154 756 aa12.33□□□□□ -0.43
GDE1-205ENST00000569899 ERFEQ4G0M1 354 aa12.33□□□□□ -0.43
GDE1-205ENST00000569899 C16orf71Q8IYS4 520 aaPredicted RBP12.33□□□□□ -0.43
GDE1-205ENST00000569899 RHPN1Q8TCX5 695 aa12.33□□□□□ -0.43
GDE1-205ENST00000569899 SETDB2Q96T68 719 aa12.33□□□□□ -0.43
GDE1-205ENST00000569899 IL1RAPL2Q9NP60 686 aa12.33□□□□□ -0.43
GDE1-205ENST00000569899 COPRSQ9NQ92 184 aa12.33□□□□□ -0.43
GDE1-205ENST00000569899 PNPLA7Q6ZV29 1317 aa12.33□□□□□ -0.44
GDE1-205ENST00000569899 CSF1RP07333 972 aa12.33□□□□□ -0.44
GDE1-205ENST00000569899 NFIXQ14938 502 aa12.33□□□□□ -0.44
GDE1-205ENST00000569899 HSP90AB4PQ58FF6 505 aa12.33□□□□□ -0.44
GDE1-205ENST00000569899 COL23A1Q86Y22 540 aaPredicted RBP12.33□□□□□ -0.44
GDE1-205ENST00000569899 SULF1Q8IWU6 871 aa12.33□□□□□ -0.44
GDE1-205ENST00000569899 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
GDE1-205ENST00000569899 TTLL11Q8NHH1 800 aa12.33□□□□□ -0.44
GDE1-205ENST00000569899 KIF1BPQ96EK5 621 aa12.33□□□□□ -0.44
GDE1-205ENST00000569899 ZNF594Q96JF6 807 aaPredicted RBP12.33□□□□□ -0.44
GDE1-205ENST00000569899 GREM2Q9H772 168 aa12.33□□□□□ -0.44
GDE1-205ENST00000569899 PCDH10Q9P2E7 1040 aa12.33□□□□□ -0.44
GDE1-205ENST00000569899 NBPF5PQ86XG9 351 aaPredicted RBP12.32□□□□□ -0.44
GDE1-205ENST00000569899 ANKK1Q8NFD2 765 aa12.32□□□□□ -0.44
GDE1-205ENST00000569899 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.32□□□□□ -0.44
GDE1-205ENST00000569899 SALL3Q9BXA9 1300 aa12.31□□□□□ -0.44
GDE1-205ENST00000569899 RIC1Q4ADV7 1423 aa12.31□□□□□ -0.44
GDE1-205ENST00000569899 ARAP2Q8WZ64 1704 aa12.31□□□□□ -0.44
GDE1-205ENST00000569899 SASH1O94885 1247 aa12.31□□□□□ -0.44
GDE1-205ENST00000569899 CD46P15529 392 aa12.31□□□□□ -0.44
GDE1-205ENST00000569899 G3BP1Q13283 466 aaKnown RBP eCLIP12.31□□□□□ -0.44
GDE1-205ENST00000569899 ERC1Q8IUD2 1116 aa12.31□□□□□ -0.44
GDE1-205ENST00000569899 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
GDE1-205ENST00000569899 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
GDE1-205ENST00000569899 LRCH3Q96II8 777 aa12.31□□□□□ -0.44
GDE1-205ENST00000569899 BEGAINQ9BUH8 593 aa12.31□□□□□ -0.44
GDE1-205ENST00000569899 NYXQ9GZU5 481 aa12.31□□□□□ -0.44
GDE1-205ENST00000569899 SLC10A3P09131 477 aa12.3□□□□□ -0.44
GDE1-205ENST00000569899 ITGA6P23229 1130 aa12.3□□□□□ -0.44
GDE1-205ENST00000569899 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
GDE1-205ENST00000569899 CCDC24Q8N4L8 307 aa12.3□□□□□ -0.44
GDE1-205ENST00000569899 WNT2BQ93097 391 aa12.3□□□□□ -0.44
GDE1-205ENST00000569899 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.3□□□□□ -0.44
GDE1-205ENST00000569899 COL11A2P13942 1736 aaPredicted RBP12.3□□□□□ -0.44
GDE1-205ENST00000569899 RTL9Q8NET4 1388 aa12.3□□□□□ -0.44
GDE1-205ENST00000569899 RNF40O75150 1001 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 GTF2E1P29083 439 aaPredicted RBP12.29□□□□□ -0.44
GDE1-205ENST00000569899 DDR1Q08345 913 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 IFIT5Q13325 482 aaKnown RBP12.29□□□□□ -0.44
GDE1-205ENST00000569899 SLC15A2Q16348 729 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 LRRC24Q50LG9 513 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 TSHZ3Q63HK5 1081 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 ATG9AQ7Z3C6 839 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 DDRGK1Q96HY6 314 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 PUS3Q9BZE2 481 aaKnown RBP12.29□□□□□ -0.44
GDE1-205ENST00000569899 STK32BQ9NY57 414 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 CACNA1SQ13698 1873 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 ZNF609O15014 1411 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 ANKRD18BA2A2Z9 1011 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 BCAMP50895 628 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 TAF7LQ5H9L4 462 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 FLAD1Q8NFF5 587 aa12.29□□□□□ -0.44
GDE1-205ENST00000569899 SOWAHBA6NEL2 793 aa12.28□□□□□ -0.44
GDE1-205ENST00000569899 EYA2O00167 538 aa12.28□□□□□ -0.44
GDE1-205ENST00000569899 HSP90B1P14625 803 aaKnown RBP12.28□□□□□ -0.44
GDE1-205ENST00000569899 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
GDE1-205ENST00000569899 MX1P20591 662 aa12.28□□□□□ -0.44
GDE1-205ENST00000569899 TM4SF1P30408 202 aa12.28□□□□□ -0.44
GDE1-205ENST00000569899 PDE1AP54750 535 aa12.28□□□□□ -0.44
GDE1-205ENST00000569899 TFCP2Q12800 502 aa12.28□□□□□ -0.44
GDE1-205ENST00000569899 C8orf34Q49A92 452 aa12.28□□□□□ -0.44
GDE1-205ENST00000569899 CCDC152Q4G0S7 254 aa12.28□□□□□ -0.44
GDE1-205ENST00000569899 TPTE2Q6XPS3 522 aa12.28□□□□□ -0.44
GDE1-205ENST00000569899 CNBD1Q8NA66 436 aa12.28□□□□□ -0.44
GDE1-205ENST00000569899 SEC31BQ9NQW1 1179 aa12.28□□□□□ -0.44
GDE1-205ENST00000569899 POLRMTO00411 1230 aaKnown RBP12.27□□□□□ -0.44
GDE1-205ENST00000569899 NPHP1O15259 732 aa12.27□□□□□ -0.44
GDE1-205ENST00000569899 CIAO1O76071 339 aa12.27□□□□□ -0.44
GDE1-205ENST00000569899 SLC4A3P48751 1232 aa12.27□□□□□ -0.44
GDE1-205ENST00000569899 SLC10A5Q5PT55 438 aa12.27□□□□□ -0.44
GDE1-205ENST00000569899 TTC22Q5TAA0 569 aa12.27□□□□□ -0.44
GDE1-205ENST00000569899 MSL1Q68DK7 614 aa12.27□□□□□ -0.44
GDE1-205ENST00000569899 PRR5LQ6MZQ0 368 aa12.27□□□□□ -0.44
GDE1-205ENST00000569899 AACSQ86V21 672 aa12.27□□□□□ -0.44
GDE1-205ENST00000569899 CLASRPQ8N2M8 674 aaKnown RBP12.27□□□□□ -0.44
GDE1-205ENST00000569899 TLR7Q9NYK1 1049 aaKnown RBP12.27□□□□□ -0.44
GDE1-205ENST00000569899 SERPINB2P05120 415 aa12.26□□□□□ -0.45
GDE1-205ENST00000569899 IL15P40933 162 aaPredicted RBP12.26□□□□□ -0.45
GDE1-205ENST00000569899 EAF2Q96CJ1 260 aaPredicted RBP12.26□□□□□ -0.45
GDE1-205ENST00000569899 SF3B3Q15393 1217 aaKnown RBP12.26□□□□□ -0.45
GDE1-205ENST00000569899 TNNI3KQ59H18 835 aa12.26□□□□□ -0.45
GDE1-205ENST00000569899 BMP2KLQ5H9B9 411 aa12.26□□□□□ -0.45
GDE1-205ENST00000569899 CCDC125Q86Z20 511 aa12.26□□□□□ -0.45
GDE1-205ENST00000569899 KCTD12Q96CX2 325 aaKnown RBP12.26□□□□□ -0.45
GDE1-205ENST00000569899 OSBPL3Q9H4L5 887 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms