RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 ATP6V1DQ9Y5K8 247 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 DDX49Q9Y6V7 483 aaKnown RBP6.41□□□□□ -1.38
SF3B3-213ENST00000569687 MROH5Q6ZUA9 1318 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 CICQ96RK0 1608 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-213ENST00000569687 NHSQ6T4R5 1651 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 STX6O43752 255 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 MBD3O95983 291 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 CYP21A2P08686 494 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 UQCRFS1P1P0C7P4 283 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 HSPD1P10809 573 aaKnown RBP6.4□□□□□ -1.38
SF3B3-213ENST00000569687 CPA1P15085 419 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 PDCP20941 246 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 FECHP22830 423 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 GPTP24298 496 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 ADORA1P30542 326 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 EVCP57679 992 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 TOB2Q14106 344 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-213ENST00000569687 TTF1Q15361 905 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-213ENST00000569687 ATP2B3Q16720 1220 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 METTL24Q5JXM2 366 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 TTC39AQ5SRH9 613 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 GORABQ5T7V8 394 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 ZSCAN25Q6NSZ9 544 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 DHX32Q7L7V1 743 aaKnown RBP6.4□□□□□ -1.38
SF3B3-213ENST00000569687 ILDR1Q86SU0 546 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-213ENST00000569687 SEPT12Q8IYM1 358 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 LPIN2Q92539 896 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 SEC62Q99442 399 aaKnown RBP6.4□□□□□ -1.38
SF3B3-213ENST00000569687 GZF1Q9H116 711 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-213ENST00000569687 GOPCQ9HD26 462 aa6.4□□□□□ -1.38
SF3B3-213ENST00000569687 ZNF330Q9Y3S2 320 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-213ENST00000569687 UBN2Q6ZU65 1347 aa6.4□□□□□ -1.39
SF3B3-213ENST00000569687 SPEF2Q9C093 1822 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 A6NJR5 290 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 GNPATO15228 680 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 KCNQ2O43526 872 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 ARID4AP29374 1257 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-213ENST00000569687 FOXK1P85037 733 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 ST3GAL1Q11201 340 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 TTLL12Q14166 644 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-213ENST00000569687 UBE3CQ15386 1083 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 SF3B3Q15393 1217 aaKnown RBP6.39□□□□□ -1.39
SF3B3-213ENST00000569687 ALX1Q15699 326 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 CCDC82Q8N4S0 544 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 RGS22Q8NE09 1264 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 GPT2Q8TD30 523 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 APPBP2Q92624 585 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 OSBP2Q969R2 916 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 LLPHQ9BRT6 129 aaKnown RBP6.39□□□□□ -1.39
SF3B3-213ENST00000569687 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.39□□□□□ -1.397e-8■■□□□ 12.3
SF3B3-213ENST00000569687 GRPEL1Q9HAV7 217 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 CNNM1Q9NRU3 951 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 MTMR6Q9Y217 621 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 TAF6LQ9Y6J9 622 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 NDUFB9Q9Y6M9 179 aa6.39□□□□□ -1.39
SF3B3-213ENST00000569687 PFKFB2O60825 505 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 LARGE1O95461 756 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 NTSR2O95665 410 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 F13A1P00488 732 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 CHGBP05060 677 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 OSBPP22059 807 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 GJB2P29033 226 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 ZAP70P43403 619 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 RBM6P78332 1123 aaKnown RBP6.38□□□□□ -1.39
SF3B3-213ENST00000569687 FKBP4Q02790 459 aaKnown RBP eCLIP6.38□□□□□ -1.39
SF3B3-213ENST00000569687 PUM3Q15397 648 aaKnown RBP6.38□□□□□ -1.39
SF3B3-213ENST00000569687 CSPP1Q1MSJ5 1256 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 ZSCAN23Q3MJ62 389 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 CCDC152Q4G0S7 254 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 LARP1BQ659C4 914 aaKnown RBP6.38□□□□□ -1.39
SF3B3-213ENST00000569687 DPY19L2Q6NUT2 758 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 CCDC129Q6ZRS4 1044 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 NOL8Q76FK4 1167 aaKnown RBP6.38□□□□□ -1.39
SF3B3-213ENST00000569687 USP48Q86UV5 1035 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 GAS2L3Q86XJ1 694 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 CCDC83Q8IWF9 413 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 NECAB1Q8N987 351 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 TMC2Q8TDI7 906 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 ZNF274Q96GC6 653 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-213ENST00000569687 ZNF652Q9Y2D9 606 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 MAST3O60307 1309 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 WDR19Q8NEZ3 1342 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 CNTNAP4Q9C0A0 1308 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 RIC1Q4ADV7 1423 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 ZNF831Q5JPB2 1677 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 RREB1Q92766 1687 aa6.38□□□□□ -1.39
SF3B3-213ENST00000569687 BTAF1O14981 1849 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 E7EWF7 191 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 M0R2C6 588 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 FOXP2O15409 715 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 RPS6KA4O75676 772 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 LETM1O95202 739 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-213ENST00000569687 FGAP02671 866 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 SLC5A1P13866 664 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 NCLP19338 710 aaKnown RBP6.37□□□□□ -1.39
SF3B3-213ENST00000569687 ADD2P35612 726 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 MCAMP43121 646 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 COL9A3Q14050 684 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-213ENST00000569687 SCARF1Q14162 830 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 HIC1Q14526 733 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms