RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 LAMB2P55268 1798 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 ARAP2Q8WZ64 1704 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.79□□□□□ -1.32
CDH13-213ENST00000569454 ELP1O95163 1332 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 ZMYM6O95789 1325 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 SPATA31A5Q5VU36 1347 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 MROH5Q6ZUA9 1318 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 SPATA31A7Q8IWB4 1347 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 WDR19Q8NEZ3 1342 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 IRS4O14654 1257 aaPredicted RBP6.78□□□□□ -1.32
CDH13-213ENST00000569454 ITGA6P23229 1130 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 KRT85P78386 507 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 LRRC24Q50LG9 513 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 HS1BP3Q53T59 392 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 METTL24Q5JXM2 366 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 LRSAM1Q6UWE0 723 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 CCDC83Q8IWF9 413 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 ZNF34Q8IZ26 560 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 APPBP2Q92624 585 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 GTF3C6Q969F1 213 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 COL26A1Q96A83 441 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 KLRG1Q96E93 195 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 XAGE2Q96GT9 111 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 SNX27Q96L92 541 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.78□□□□□ -1.32
CDH13-213ENST00000569454 TRMT112Q9UI30 125 aaKnown RBP6.78□□□□□ -1.32
CDH13-213ENST00000569454 ZBTB1Q9Y2K1 713 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 CARMIL3Q8ND23 1372 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 CHD4Q14839 1912 aa6.78□□□□□ -1.32
CDH13-213ENST00000569454 MAST3O60307 1309 aa6.77□□□□□ -1.32
CDH13-213ENST00000569454 DHX16O60231 1041 aaKnown RBP6.77□□□□□ -1.33
CDH13-213ENST00000569454 EIF5P55010 431 aaKnown RBP6.77□□□□□ -1.33
CDH13-213ENST00000569454 FGD1P98174 961 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 PUM3Q15397 648 aaKnown RBP6.77□□□□□ -1.33
CDH13-213ENST00000569454 ME3Q16798 604 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 IMMTQ16891 758 aaKnown RBP6.77□□□□□ -1.33
CDH13-213ENST00000569454 CCDC183Q5T5S1 534 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 ATL3Q6DD88 541 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 CLEC4GQ6UXB4 293 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 LDHAL6AQ6ZMR3 332 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 DHX32Q7L7V1 743 aaKnown RBP6.77□□□□□ -1.33
CDH13-213ENST00000569454 TTLL11Q8NHH1 800 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 GPT2Q8TD30 523 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 JARID2Q92833 1246 aaPredicted RBP6.77□□□□□ -1.33
CDH13-213ENST00000569454 MARVELD3Q96A59 401 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 SYTL4Q96C24 671 aaPredicted RBP6.77□□□□□ -1.33
CDH13-213ENST00000569454 FAM89AQ96GI7 184 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 AGXT2Q9BYV1 514 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 SCAND2PQ9GZW5 306 aaPredicted RBP6.77□□□□□ -1.33
CDH13-213ENST00000569454 ZSCAN16Q9H4T2 348 aaPredicted RBP6.77□□□□□ -1.33
CDH13-213ENST00000569454 OCEL1Q9H607 264 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 CNNM1Q9NRU3 951 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 TBC1D2BQ9UPU7 963 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 MTMR6Q9Y217 621 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 RIPOR2Q9Y4F9 1068 aa6.77□□□□□ -1.33
CDH13-213ENST00000569454 TNRC18O15417 2968 aaPredicted RBP6.77□□□□□ -1.33
CDH13-213ENST00000569454 NUP98P52948 1817 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 LOC102724428A0A0B4J2F2 783 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 VPS37CA5D8V6 355 aaPredicted RBP6.76□□□□□ -1.33
CDH13-213ENST00000569454 PFKFB2O60825 505 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 PDE8BO95263 885 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 CYP21A2P08686 494 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 HSPD1P10809 573 aaKnown RBP6.76□□□□□ -1.33
CDH13-213ENST00000569454 SLC5A1P13866 664 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 ARID4AP29374 1257 aaPredicted RBP6.76□□□□□ -1.33
CDH13-213ENST00000569454 PRIM1P49642 420 aaKnown RBP6.76□□□□□ -1.33
CDH13-213ENST00000569454 SIK1P57059 783 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 TIMM10P62072 90 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 TOB2Q14106 344 aaPredicted RBP6.76□□□□□ -1.33
CDH13-213ENST00000569454 UBE3CQ15386 1083 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 CCDC152Q4G0S7 254 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 LARP1BQ659C4 914 aaKnown RBP6.76□□□□□ -1.33
CDH13-213ENST00000569454 TMED8Q6PL24 325 aaPredicted RBP6.76□□□□□ -1.33
CDH13-213ENST00000569454 VGLL2Q8N8G2 317 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 LPIN2Q92539 896 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 EDC3Q96F86 508 aaKnown RBP6.76□□□□□ -1.33
CDH13-213ENST00000569454 ZNF274Q96GC6 653 aaPredicted RBP6.76□□□□□ -1.33
CDH13-213ENST00000569454 ZNF594Q96JF6 807 aaPredicted RBP6.76□□□□□ -1.33
CDH13-213ENST00000569454 PPP1R9BQ96SB3 815 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 UTP14AQ9BVJ6 771 aaKnown RBP6.76□□□□□ -1.33
CDH13-213ENST00000569454 TMEM106CQ9BVX2 250 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 TPCN1Q9ULQ1 816 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 BCORQ6W2J9 1755 aa6.76□□□□□ -1.33
CDH13-213ENST00000569454 COL5A3P25940 1745 aaPredicted RBP6.76□□□□□ -1.33
CDH13-213ENST00000569454 SCN7AQ01118 1682 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 IGSF3O75054 1194 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 LARGE1O95461 756 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 CPA1P15085 419 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 GPTP24298 496 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 ATP6V1AP38606 617 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 CRKLP46109 303 aaKnown RBP6.75□□□□□ -1.33
CDH13-213ENST00000569454 VASPP50552 380 aaPredicted RBP6.75□□□□□ -1.33
CDH13-213ENST00000569454 EVCP57679 992 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 FKBP4Q02790 459 aaKnown RBP eCLIP6.75□□□□□ -1.33
CDH13-213ENST00000569454 HLFQ16534 295 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 WASHC4Q2M389 1173 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 UVSSAQ2YD98 709 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 NAA16Q6N069 864 aaPredicted RBP6.75□□□□□ -1.33
CDH13-213ENST00000569454 RALYLQ86SE5 291 aaKnown RBP6.75□□□□□ -1.33
CDH13-213ENST00000569454 USP48Q86UV5 1035 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms