RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 UBE4AQ14139 1066 aa11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 KIF4BQ2VIQ3 1234 aa11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 DACT2Q5SW24 774 aa11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 USP48Q86UV5 1035 aa11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 FAM84BQ96KN1 310 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 CEP126Q9P2H0 1117 aa11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 HDAC5Q9UQL6 1122 aa11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 PCDHAC2Q9Y5I4 1007 aa11.22□□□□□ -0.61
GTF3C1-210ENST00000569394 IRS2Q9Y4H2 1338 aa11.21□□□□□ -0.61
GTF3C1-210ENST00000569394 ADM5C9JUS6 153 aa11.21□□□□□ -0.61
GTF3C1-210ENST00000569394 ZBTB7BO15156 539 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-210ENST00000569394 RBM5P52756 815 aaKnown RBP eCLIP11.21□□□□□ -0.61
GTF3C1-210ENST00000569394 TFCP2Q12800 502 aa11.21□□□□□ -0.61
GTF3C1-210ENST00000569394 SCARF1Q14162 830 aa11.21□□□□□ -0.61
GTF3C1-210ENST00000569394 CAVIN4Q5BKX8 364 aa11.21□□□□□ -0.61
GTF3C1-210ENST00000569394 PAXIP1Q6ZW49 1069 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-210ENST00000569394 DPF2Q92785 391 aa11.21□□□□□ -0.61
GTF3C1-210ENST00000569394 NEUROD6Q96NK8 337 aa11.21□□□□□ -0.61
GTF3C1-210ENST00000569394 MKRN1Q9UHC7 482 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-210ENST00000569394 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-210ENST00000569394 POLR2AP24928 1970 aaKnown RBP11.21□□□□□ -0.62
GTF3C1-210ENST00000569394 APBB1O00213 710 aa11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 ITGBL1O95965 494 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 IFIT1P09914 478 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 SLC5A1P13866 664 aa11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 RPS12P25398 132 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 ADORA1P30542 326 aa11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 TIMM10P62072 90 aa11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 G3BP1Q13283 466 aaKnown RBP eCLIP11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 PUM3Q15397 648 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 NBPF9Q3BBW0 867 aa11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 STRIP1Q5VSL9 837 aa11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 CERS5Q8N5B7 392 aa11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 VGLL2Q8N8G2 317 aa11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 AGBL3Q8NEM8 1001 aa11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 MYOZ2Q9NPC6 264 aa11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 PSME4Q14997 1843 aa11.2□□□□□ -0.62
GTF3C1-210ENST00000569394 ADAMTSL1Q8N6G6 1762 aa11.19□□□□□ -0.62
GTF3C1-210ENST00000569394 SURF6O75683 361 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-210ENST00000569394 IL15P40933 162 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-210ENST00000569394 ATP2B3Q16720 1220 aa11.19□□□□□ -0.62
GTF3C1-210ENST00000569394 ANGEL2Q5VTE6 544 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-210ENST00000569394 PRAMEF18Q5VWM3 479 aa11.19□□□□□ -0.62
GTF3C1-210ENST00000569394 OGFOD1Q8N543 542 aa11.19□□□□□ -0.62
GTF3C1-210ENST00000569394 DCPSQ96C86 337 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-210ENST00000569394 COPRSQ9NQ92 184 aa11.19□□□□□ -0.62
GTF3C1-210ENST00000569394 GGA3Q9NZ52 723 aa11.19□□□□□ -0.62
GTF3C1-210ENST00000569394 ABT1Q9ULW3 272 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-210ENST00000569394 CELF2O95319 508 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 MS4A1P11836 297 aa11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 IL1R1P14778 569 aa11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 ATP8B2P98198 1209 aa11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 MVPQ14764 893 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 GRIK5Q16478 980 aa11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 MFSD14BQ5SR56 506 aa11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 C15orf52Q6ZUT6 534 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 KRT26Q7Z3Y9 468 aa11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 JMYQ8N9B5 988 aa11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 TDRD7Q8NHU6 1098 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 LPIN2Q92539 896 aa11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 KLRG1Q96E93 195 aa11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 GMLQ99445 158 aa11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 HDAC9Q9UKV0 1011 aa11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 ZNF646O15015 1829 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-210ENST00000569394 PASKQ96RG2 1323 aa11.17□□□□□ -0.62
GTF3C1-210ENST00000569394 A0A1B0GUL7 405 aa11.17□□□□□ -0.62
GTF3C1-210ENST00000569394 CLRN2A0PK11 232 aa11.17□□□□□ -0.62
GTF3C1-210ENST00000569394 TMEM88BA6NKF7 163 aa11.17□□□□□ -0.62
GTF3C1-210ENST00000569394 CIAO1O76071 339 aa11.17□□□□□ -0.62
GTF3C1-210ENST00000569394 FGFR2P21802 821 aa11.17□□□□□ -0.62
GTF3C1-210ENST00000569394 PHKA1P46020 1223 aa11.17□□□□□ -0.62
GTF3C1-210ENST00000569394 GORABQ5T7V8 394 aa11.17□□□□□ -0.62
GTF3C1-210ENST00000569394 COL13A1Q5TAT6 717 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-210ENST00000569394 FBXO33Q7Z6M2 555 aa11.17□□□□□ -0.62
GTF3C1-210ENST00000569394 TTF2Q9UNY4 1162 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-210ENST00000569394 EXOC6BQ9Y2D4 811 aa11.17□□□□□ -0.62
GTF3C1-210ENST00000569394 MYO3BQ8WXR4 1341 aa11.16□□□□□ -0.62
GTF3C1-210ENST00000569394 ZNF280AP59817 542 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-210ENST00000569394 MTX1Q13505 466 aa11.16□□□□□ -0.62
GTF3C1-210ENST00000569394 PRKG1Q13976 671 aa11.16□□□□□ -0.62
GTF3C1-210ENST00000569394 DLGAP5Q15398 846 aa11.16□□□□□ -0.62
GTF3C1-210ENST00000569394 CFAP100Q494V2 611 aa11.16□□□□□ -0.62
GTF3C1-210ENST00000569394 CEP85Q6P2H3 762 aa11.16□□□□□ -0.62
GTF3C1-210ENST00000569394 CDC37L1Q7L3B6 337 aa11.16□□□□□ -0.62
GTF3C1-210ENST00000569394 SULF1Q8IWU6 871 aa11.16□□□□□ -0.62
GTF3C1-210ENST00000569394 XAGE2Q96GT9 111 aa11.16□□□□□ -0.62
GTF3C1-210ENST00000569394 VEZTQ9HBM0 779 aa11.16□□□□□ -0.62
GTF3C1-210ENST00000569394 DDX19BQ9UMR2 479 aa11.16□□□□□ -0.62
GTF3C1-210ENST00000569394 MYH13Q9UKX3 1938 aa11.15□□□□□ -0.62
GTF3C1-210ENST00000569394 AOX1Q06278 1338 aa11.15□□□□□ -0.62
GTF3C1-210ENST00000569394 WNT10BO00744 389 aa11.15□□□□□ -0.62
GTF3C1-210ENST00000569394 CST9Q5W186 159 aa11.15□□□□□ -0.62
GTF3C1-210ENST00000569394 TTLL12Q14166 644 aaPredicted RBP11.14□□□□□ -0.63
GTF3C1-210ENST00000569394 CCDC102BQ68D86 513 aa11.14□□□□□ -0.63
GTF3C1-210ENST00000569394 TNS4Q8IZW8 715 aa11.14□□□□□ -0.63
GTF3C1-210ENST00000569394 SSH3Q8TE77 659 aa11.14□□□□□ -0.63
GTF3C1-210ENST00000569394 ZC3H15Q8WU90 426 aaKnown RBP11.14□□□□□ -0.63
GTF3C1-210ENST00000569394 PRMT6Q96LA8 375 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms