RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 TUBB4BP68371 445 aa7.49□□□□□ -1.21
KARS-211ENST00000569298 IFT88Q13099 833 aa7.49□□□□□ -1.21
KARS-211ENST00000569298 MTMR2Q13614 643 aa7.49□□□□□ -1.21
KARS-211ENST00000569298 DHX8Q14562 1220 aaKnown RBP7.49□□□□□ -1.21
KARS-211ENST00000569298 DBN1Q16643 649 aa7.49□□□□□ -1.21
KARS-211ENST00000569298 TBC1D10BQ4KMP7 808 aaPredicted RBP7.49□□□□□ -1.21
KARS-211ENST00000569298 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.49□□□□□ -1.21
KARS-211ENST00000569298 SPATS2Q86XZ4 545 aaKnown RBP7.49□□□□□ -1.21
KARS-211ENST00000569298 IQCF2Q8IXL9 164 aa7.49□□□□□ -1.21
KARS-211ENST00000569298 CCDC170Q8IYT3 715 aa7.49□□□□□ -1.21
KARS-211ENST00000569298 CCDC24Q8N4L8 307 aa7.49□□□□□ -1.21
KARS-211ENST00000569298 L2HGDHQ9H9P8 463 aa7.49□□□□□ -1.21
KARS-211ENST00000569298 SOGA1O94964 1423 aa7.49□□□□□ -1.21
KARS-211ENST00000569298 AQRO60306 1485 aaKnown RBP eCLIP7.49□□□□□ -1.21
KARS-211ENST00000569298 GPRASP1Q5JY77 1395 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 GOLGA6L10A6NI86 522 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 FAM177BA6PVY3 158 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 TPD52L2O43399 206 aaKnown RBP7.48□□□□□ -1.21
KARS-211ENST00000569298 E2F6O75461 281 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 ADCY5O95622 1261 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 FESP07332 822 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 NAT1P18440 290 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 RAB27AP51159 221 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 CDR1P51861 262 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 BLMP54132 1417 aaPredicted RBP7.48□□□□□ -1.21
KARS-211ENST00000569298 LONRF3Q496Y0 759 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 ANKRD45Q5TZF3 282 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 DESI1Q6ICB0 168 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 LRRC31Q6UY01 552 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 CCDC80Q76M96 950 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 GET4Q7L5D6 327 aaPredicted RBP7.48□□□□□ -1.21
KARS-211ENST00000569298 SPATA21Q7Z572 469 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 TAX1BP1Q86VP1 789 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 PRPF38AQ8NAV1 312 aaKnown RBP7.48□□□□□ -1.21
KARS-211ENST00000569298 ZFAND2BQ8WV99 257 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 CCDC34Q96HJ3 373 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 CABS1Q96KC9 395 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 OSBPL9Q96SU4 736 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 NUDT12Q9BQG2 462 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 RGL1Q9NZL6 768 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 MAGEC2Q9UBF1 373 aaPredicted RBP7.48□□□□□ -1.21
KARS-211ENST00000569298 ADAM21Q9UKJ8 722 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 ATP8A1Q9Y2Q0 1164 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 KIF7Q2M1P5 1343 aa7.48□□□□□ -1.21
KARS-211ENST00000569298 A6NNZ2 444 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 F8VZ95 297 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 GOLGA6L19H0YKK7 550 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 LIN7AO14910 233 aaPredicted RBP7.47□□□□□ -1.21
KARS-211ENST00000569298 FLT3P36888 993 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 CCNHP51946 323 aaPredicted RBP7.47□□□□□ -1.21
KARS-211ENST00000569298 RHBDL3P58872 404 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 TUBB8Q3ZCM7 444 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 CEP135Q66GS9 1140 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 CDCA2Q69YH5 1023 aaPredicted RBP7.47□□□□□ -1.21
KARS-211ENST00000569298 NOL8Q76FK4 1167 aaKnown RBP7.47□□□□□ -1.21
KARS-211ENST00000569298 CATIPQ7Z7H3 387 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 MYLK4Q86YV6 388 aaPredicted RBP7.47□□□□□ -1.21
KARS-211ENST00000569298 TRIM42Q8IWZ5 723 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 AMOTL1Q8IY63 956 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 CYP4X1Q8N118 509 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 KCTD17Q8N5Z5 321 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 LZICQ8WZA0 190 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 BICD1Q96G01 975 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 ACBD3Q9H3P7 528 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 UNC45AQ9H3U1 944 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 TTC12Q9H892 705 aaPredicted RBP7.47□□□□□ -1.21
KARS-211ENST00000569298 ODF2LQ9ULJ1 636 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 BARX2Q9UMQ3 279 aaPredicted RBP7.47□□□□□ -1.21
KARS-211ENST00000569298 NDUFB9Q9Y6M9 179 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 RPGRIP1LQ68CZ1 1315 aa7.47□□□□□ -1.21
KARS-211ENST00000569298 MAP3K5Q99683 1374 aa7.46□□□□□ -1.21
KARS-211ENST00000569298 EIF4G3O43432 1585 aaKnown RBP7.46□□□□□ -1.21
KARS-211ENST00000569298 ECEL1O95672 775 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 WNT7BP56706 349 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 MCCD1P59942 119 aaPredicted RBP7.46□□□□□ -1.22
KARS-211ENST00000569298 SCRN1Q12765 414 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 SMC1AQ14683 1233 aaKnown RBP7.46□□□□□ -1.22
KARS-211ENST00000569298 POSTNQ15063 836 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 PTPRNQ16849 979 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 CCDC38Q502W7 563 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 PTCRAQ6ISU1 281 aaPredicted RBP7.46□□□□□ -1.22
KARS-211ENST00000569298 CCDC73Q6ZRK6 1079 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 SKAP1Q86WV1 359 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 PRR7Q8TB68 274 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 FAM81AQ8TBF8 368 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 JAKMIP2Q96AA8 810 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 THOC1Q96FV9 657 aaKnown RBP7.46□□□□□ -1.22
KARS-211ENST00000569298 CCDC85AQ96PX6 553 aaPredicted RBP7.46□□□□□ -1.22
KARS-211ENST00000569298 RWDD1Q9H446 243 aaPredicted RBP7.46□□□□□ -1.22
KARS-211ENST00000569298 TMOD4Q9NZQ9 345 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 WDR37Q9Y2I8 494 aa7.46□□□□□ -1.22
KARS-211ENST00000569298 TDRD9Q8NDG6 1382 aaKnown RBP7.46□□□□□ -1.22
KARS-211ENST00000569298 RPAP1Q9BWH6 1393 aaPredicted RBP7.46□□□□□ -1.22
KARS-211ENST00000569298 TARBP1Q13395 1621 aaKnown RBP7.45□□□□□ -1.22
KARS-211ENST00000569298 POLR1AO95602 1720 aaPredicted RBP7.45□□□□□ -1.22
KARS-211ENST00000569298 ERC2O15083 957 aa7.45□□□□□ -1.22
KARS-211ENST00000569298 CBFA2T2O43439 604 aa7.45□□□□□ -1.22
KARS-211ENST00000569298 PPFIA3O75145 1194 aa7.45□□□□□ -1.22
KARS-211ENST00000569298 AVPP01185 164 aa7.45□□□□□ -1.22
KARS-211ENST00000569298 CCDC175P0C221 793 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms