RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 POLLQ9UGP5 575 aa19.7■□□□□ 0.74
USB1-215ENST00000569252 RIMBP2O15034 1052 aa19.69■□□□□ 0.74
USB1-215ENST00000569252 IFIT2P09913 472 aaKnown RBP19.69■□□□□ 0.74
USB1-215ENST00000569252 NIM1KQ8IY84 436 aa19.69■□□□□ 0.74
USB1-215ENST00000569252 GPR108Q9NPR9 543 aa19.69■□□□□ 0.74
USB1-215ENST00000569252 GMPSP49915 693 aaPredicted RBP19.68■□□□□ 0.74
USB1-215ENST00000569252 TIMM10P62072 90 aa19.68■□□□□ 0.74
USB1-215ENST00000569252 B4GALNT3Q6L9W6 998 aa19.68■□□□□ 0.74
USB1-215ENST00000569252 GPR101Q96P66 508 aaPredicted RBP19.68■□□□□ 0.74
USB1-215ENST00000569252 COL4A1P02462 1669 aa19.68■□□□□ 0.74
USB1-215ENST00000569252 CXCL9Q07325 125 aa19.67■□□□□ 0.74
USB1-215ENST00000569252 ZNF804AQ7Z570 1209 aa19.67■□□□□ 0.74
USB1-215ENST00000569252 VGLL2Q8N8G2 317 aa19.67■□□□□ 0.74
USB1-215ENST00000569252 ZNF408Q9H9D4 720 aa19.67■□□□□ 0.74
USB1-215ENST00000569252 IL1RAPL2Q9NP60 686 aa19.67■□□□□ 0.74
USB1-215ENST00000569252 GNL3LQ9NVN8 582 aaKnown RBP19.67■□□□□ 0.74
USB1-215ENST00000569252 GPRC5DQ9NZD1 345 aa19.67■□□□□ 0.74
USB1-215ENST00000569252 SPEF2Q9C093 1822 aa19.67■□□□□ 0.74
USB1-215ENST00000569252 A0A1B0GUL7 405 aa19.66■□□□□ 0.74
USB1-215ENST00000569252 CCDC85CA6NKD9 419 aa19.66■□□□□ 0.74
USB1-215ENST00000569252 FRAT2O75474 233 aaPredicted RBP19.66■□□□□ 0.74
USB1-215ENST00000569252 RAD17O75943 681 aa19.66■□□□□ 0.74
USB1-215ENST00000569252 MAP2K1Q02750 393 aaPredicted RBP19.66■□□□□ 0.74
USB1-215ENST00000569252 TNNI3KQ59H18 835 aa19.66■□□□□ 0.74
USB1-215ENST00000569252 CENPQQ7L2Z9 268 aaPredicted RBP19.66■□□□□ 0.74
USB1-215ENST00000569252 AACSQ86V21 672 aa19.66■□□□□ 0.74
USB1-215ENST00000569252 TRPM4Q8TD43 1214 aa19.66■□□□□ 0.74
USB1-215ENST00000569252 FPGT-TNNI3KV9GXZ4 949 aa19.66■□□□□ 0.74
USB1-215ENST00000569252 SNAP23O00161 211 aa19.65■□□□□ 0.74
USB1-215ENST00000569252 CELF2O95319 508 aaKnown RBP19.65■□□□□ 0.74
USB1-215ENST00000569252 HIBADHP31937 336 aaKnown RBP19.65■□□□□ 0.74
USB1-215ENST00000569252 HIRAP54198 1017 aaPredicted RBP19.65■□□□□ 0.74
USB1-215ENST00000569252 CCDC158Q5M9N0 1113 aa19.65■□□□□ 0.74
USB1-215ENST00000569252 SMC5Q8IY18 1101 aa19.65■□□□□ 0.74
USB1-215ENST00000569252 ZIC5Q96T25 663 aa19.65■□□□□ 0.74
USB1-215ENST00000569252 TLL2Q9Y6L7 1015 aa19.65■□□□□ 0.74
USB1-215ENST00000569252 CASP8AP2Q9UKL3 1982 aa19.64■□□□□ 0.74
USB1-215ENST00000569252 SMARCA5O60264 1052 aaPredicted RBP19.64■□□□□ 0.73
USB1-215ENST00000569252 FGFR2P21802 821 aa19.64■□□□□ 0.73
USB1-215ENST00000569252 KIAA2012Q0VF49 1180 aa19.64■□□□□ 0.73
USB1-215ENST00000569252 C15orf52Q6ZUT6 534 aaKnown RBP19.64■□□□□ 0.73
USB1-215ENST00000569252 USP50Q70EL3 339 aaPredicted RBP19.64■□□□□ 0.73
USB1-215ENST00000569252 XAGE2Q96GT9 111 aa19.64■□□□□ 0.73
USB1-215ENST00000569252 GPATCH3Q96I76 525 aa19.64■□□□□ 0.73
USB1-215ENST00000569252 CCDC8Q9H0W5 538 aaPredicted RBP19.64■□□□□ 0.73
USB1-215ENST00000569252 DUOX1Q9NRD9 1551 aa19.63■□□□□ 0.73
USB1-215ENST00000569252 MED23Q9ULK4 1368 aa19.63■□□□□ 0.73
USB1-215ENST00000569252 DOK7Q18PE1 504 aa19.63■□□□□ 0.73
USB1-215ENST00000569252 COA1Q9GZY4 146 aa19.63■□□□□ 0.73
USB1-215ENST00000569252 WTIPA6NIX2 430 aaPredicted RBP19.62■□□□□ 0.73
USB1-215ENST00000569252 YDJCA8MPS7 323 aa19.62■□□□□ 0.73
USB1-215ENST00000569252 GYG1P46976 350 aa19.62■□□□□ 0.73
USB1-215ENST00000569252 PODNQ7Z5L7 613 aa19.62■□□□□ 0.73
USB1-215ENST00000569252 EAF2Q96CJ1 260 aaPredicted RBP19.62■□□□□ 0.73
USB1-215ENST00000569252 ADARB2Q9NS39 739 aaKnown RBP19.62■□□□□ 0.73
USB1-215ENST00000569252 NUCB1Q02818 461 aa19.61■□□□□ 0.73
USB1-215ENST00000569252 TTC39AQ5SRH9 613 aa19.61■□□□□ 0.73
USB1-215ENST00000569252 CHD1LQ86WJ1 897 aa19.61■□□□□ 0.73
USB1-215ENST00000569252 FAM84BQ96KN1 310 aaPredicted RBP19.61■□□□□ 0.73
USB1-215ENST00000569252 ZNRF3Q9ULT6 936 aa19.61■□□□□ 0.73
USB1-215ENST00000569252 ZBTB12Q9Y330 459 aaPredicted RBP19.61■□□□□ 0.73
USB1-215ENST00000569252 LRRC37AA6NMS7 1700 aa19.61■□□□□ 0.73
USB1-215ENST00000569252 ECE1P42892 770 aa19.6■□□□□ 0.73
USB1-215ENST00000569252 BCAMP50895 628 aa19.6■□□□□ 0.73
USB1-215ENST00000569252 FBXO33Q7Z6M2 555 aa19.6■□□□□ 0.73
USB1-215ENST00000569252 SAPCD2Q86UD0 394 aa19.6■□□□□ 0.73
USB1-215ENST00000569252 LNPKQ9C0E8 428 aa19.6■□□□□ 0.73
USB1-215ENST00000569252 ECE2O60344 883 aa19.59■□□□□ 0.73
USB1-215ENST00000569252 EGFRP00533 1210 aa19.59■□□□□ 0.73
USB1-215ENST00000569252 UQCRFS1P1P0C7P4 283 aa19.59■□□□□ 0.73
USB1-215ENST00000569252 ADORA1P30542 326 aa19.59■□□□□ 0.73
USB1-215ENST00000569252 CIAPIN1Q6FI81 312 aa19.59■□□□□ 0.73
USB1-215ENST00000569252 TXNRD3Q86VQ6 643 aa19.59■□□□□ 0.73
USB1-215ENST00000569252 FBXW7Q969H0 707 aa19.59■□□□□ 0.73
USB1-215ENST00000569252 DBNDD1Q9H9R9 158 aa19.59■□□□□ 0.73
USB1-215ENST00000569252 CD209Q9NNX6 404 aa19.59■□□□□ 0.73
USB1-215ENST00000569252 KLRK1P26718 216 aa19.58■□□□□ 0.72
USB1-215ENST00000569252 CCDC102BQ68D86 513 aa19.58■□□□□ 0.72
USB1-215ENST00000569252 DBNDD2Q9BQY9 259 aa19.58■□□□□ 0.72
USB1-215ENST00000569252 BEGAINQ9BUH8 593 aa19.58■□□□□ 0.72
USB1-215ENST00000569252 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
USB1-215ENST00000569252 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.58■□□□□ 0.72
USB1-215ENST00000569252 TNIP1Q15025 636 aa19.57■□□□□ 0.72
USB1-215ENST00000569252 SAMD7Q7Z3H4 446 aa19.57■□□□□ 0.72
USB1-215ENST00000569252 USP48Q86UV5 1035 aa19.57■□□□□ 0.72
USB1-215ENST00000569252 KCNQ5Q9NR82 932 aa19.57■□□□□ 0.72
USB1-215ENST00000569252 DENND2AQ9ULE3 1009 aa19.57■□□□□ 0.72
USB1-215ENST00000569252 ZNF609O15014 1411 aa19.57■□□□□ 0.72
USB1-215ENST00000569252 SEMA3EO15041 775 aa19.56■□□□□ 0.72
USB1-215ENST00000569252 IL1R1P14778 569 aa19.56■□□□□ 0.72
USB1-215ENST00000569252 TTLL5Q6EMB2 1281 aa19.56■□□□□ 0.72
USB1-215ENST00000569252 MCOLN1Q9GZU1 580 aa19.56■□□□□ 0.72
USB1-215ENST00000569252 CNOT7Q9UIV1 285 aaKnown RBP19.56■□□□□ 0.72
USB1-215ENST00000569252 DBNLQ9UJU6 430 aaKnown RBP19.56■□□□□ 0.72
USB1-215ENST00000569252 ERC2O15083 957 aa19.55■□□□□ 0.72
USB1-215ENST00000569252 PHKA1P46020 1223 aa19.55■□□□□ 0.72
USB1-215ENST00000569252 TBC1D10BQ4KMP7 808 aaPredicted RBP19.55■□□□□ 0.72
USB1-215ENST00000569252 MICALL2Q8IY33 904 aa19.55■□□□□ 0.72
USB1-215ENST00000569252 ECHDC1Q9NTX5 307 aa19.55■□□□□ 0.72
USB1-215ENST00000569252 POLR2AP24928 1970 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms