RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 TSR2Q969E8 191 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 CAPNS2Q96L46 248 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 GPR101Q96P66 508 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 CCDC85AQ96PX6 553 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 MYH16Q9H6N6 1097 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 ZNF408Q9H9D4 720 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 PRDM10Q9NQV6 1147 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 SALL2Q9Y467 1007 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 IL16Q14005 1332 aa5.94□□□□□ -1.46
HERPUD1-213ENST00000568358 YDJCA8MPS7 323 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 TRAF5O00463 557 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 FOXN1O15353 648 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 CDK11BP21127 795 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 MAP2K2P36507 400 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 MLLT3P42568 568 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 CTSWP56202 376 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 FKBP5Q13451 457 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 CST9Q5W186 159 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 USP48Q86UV5 1035 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 WDR63Q8IWG1 891 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 SULF1Q8IWU6 871 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 C2orf69Q8N8R5 385 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 JARID2Q92833 1246 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 MPHOSPH8Q99549 860 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 CRISPLD2Q9H0B8 497 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 SEC31BQ9NQW1 1179 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 BSDC1Q9NW68 430 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 WBP1LQ9NX94 342 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 PGAP2Q9UHJ9 254 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 TLL2Q9Y6L7 1015 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 COL4A5P29400 1685 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 XDHP47989 1333 aa5.93□□□□□ -1.46
HERPUD1-213ENST00000568358 PCNTO95613 3336 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 LRRC37AA6NMS7 1700 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 LTBP1Q14766 1721 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 USP17L3A6NCW0 530 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 USP17L4A6NCW7 530 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 NEURL1BA8MQ27 555 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 PATL2C9JE40 543 aaKnown RBP5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 CA12O43570 354 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 VIL1P09327 827 aaKnown RBP5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 KCNJ4P48050 445 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 LBX1P52954 281 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 KIF4BQ2VIQ3 1234 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 TBC1D10BQ4KMP7 808 aaPredicted RBP5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 CCDC184Q52MB2 194 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 CYP4F22Q6NT55 531 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 USP17L1Q7RTZ2 530 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 SAMD7Q7Z3H4 446 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 UBE3BQ7Z3V4 1068 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 KRT26Q7Z3Y9 468 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 PODNQ7Z5L7 613 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 SAPCD2Q86UD0 394 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 SLC51AQ86UW1 340 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 CDAN1Q8IWY9 1227 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 PARP9Q8IXQ6 854 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 FAM9BQ8IZU0 186 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 OGFOD1Q8N543 542 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 AGBL3Q8NEM8 1001 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 TTLL11Q8NHH1 800 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 DNAAF4Q8WXU2 420 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 FBXW7Q969H0 707 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 CCDC97Q96F63 343 aaPredicted RBP5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 HHIPL1Q96JK4 782 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 GLIS2Q9BZE0 524 aaPredicted RBP5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 ANKRD2Q9GZV1 360 aa5.92□□□□□ -1.46
HERPUD1-213ENST00000568358 AKAP11Q9UKA4 1901 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 SPEF2Q9C093 1822 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 ANKRD18BA2A2Z9 1011 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 H7C1W4 665 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 IGKV5-2P06315 115 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 USP17L8P0C7I0 530 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 MMP14P50281 582 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 CCT4P50991 539 aaKnown RBP5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 HIRAP54198 1017 aaPredicted RBP5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 HUNKP57058 714 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 FMR1Q06787 632 aaKnown RBP eCLIP5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 GCKRQ14397 625 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 CWF19L2Q2TBE0 894 aaKnown RBP5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 TAF7LQ5H9L4 462 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 RSBN1LQ6PCB5 846 aaPredicted RBP5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 LINS1Q8NG48 757 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 TRPM4Q8TD43 1214 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 CCDC102AQ96A19 550 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 GREM2Q9H772 168 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 KCNQ5Q9NR82 932 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 IGSF5Q9NSI5 407 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 MINPP1Q9UNW1 487 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 LEMD3Q9Y2U8 911 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 CHMP3Q9Y3E7 222 aa5.91□□□□□ -1.46
HERPUD1-213ENST00000568358 CASP8AP2Q9UKL3 1982 aa5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 SHTN1A0MZ66 631 aa5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 VAMP4O75379 141 aa5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 ITGA6P23229 1130 aa5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 NF2P35240 595 aa5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 ZNF157P51786 506 aaPredicted RBP5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 EXOSC9Q06265 439 aaKnown RBP5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 NOGQ13253 232 aa5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 IFIT5Q13325 482 aaKnown RBP5.9□□□□□ -1.46
HERPUD1-213ENST00000568358 SCARF1Q14162 830 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms