RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 DHX40Q8IX18 779 aaKnown RBP12.47□□□□□ -0.41
PALB2-206ENST00000568219 SLC26A6Q9BXS9 759 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 RCOR1Q9UKL0 485 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 LOC102724159A0A0B4J2E5 919 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 ERICH2A1L162 156 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 TMEM232C9JQI7 657 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 PRC1O43663 620 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 USP8P40818 1118 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 COL9A3Q14050 684 aaPredicted RBP12.47□□□□□ -0.41
PALB2-206ENST00000568219 PWP2Q15269 919 aaKnown RBP12.47□□□□□ -0.41
PALB2-206ENST00000568219 NYAP1Q6ZVC0 841 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 CEP112Q8N8E3 955 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 TAF5LO75529 589 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 KSR2Q6VAB6 950 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 CEP126Q9P2H0 1117 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 PBRM1Q86U86 1689 aa12.47□□□□□ -0.41
PALB2-206ENST00000568219 EIF5P55010 431 aaKnown RBP12.46□□□□□ -0.41
PALB2-206ENST00000568219 COPS6Q7L5N1 327 aa12.46□□□□□ -0.41
PALB2-206ENST00000568219 STAMQ92783 540 aa12.46□□□□□ -0.41
PALB2-206ENST00000568219 PHKBQ93100 1093 aa12.46□□□□□ -0.41
PALB2-206ENST00000568219 MED14O60244 1454 aa12.46□□□□□ -0.41
PALB2-206ENST00000568219 IARSP41252 1262 aaKnown RBP12.46□□□□□ -0.41
PALB2-206ENST00000568219 WDR24Q96S15 920 aa12.46□□□□□ -0.41
PALB2-206ENST00000568219 METAP2P50579 478 aaKnown RBP eCLIP12.46□□□□□ -0.42
PALB2-206ENST00000568219 SARM1Q6SZW1 724 aa12.46□□□□□ -0.42
PALB2-206ENST00000568219 TRIM22Q8IYM9 498 aa12.46□□□□□ -0.42
PALB2-206ENST00000568219 IGSF22Q8N9C0 903 aa12.46□□□□□ -0.42
PALB2-206ENST00000568219 MAPK8IP1Q9UQF2 711 aa12.46□□□□□ -0.42
PALB2-206ENST00000568219 MADDQ8WXG6 1647 aa12.46□□□□□ -0.42
PALB2-206ENST00000568219 MAP9Q49MG5 647 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 ODF2Q5BJF6 829 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 ZNHIT6Q9NWK9 470 aaKnown RBP12.45□□□□□ -0.42
PALB2-206ENST00000568219 AKR1B15C9JRZ8 316 aaPredicted RBP12.45□□□□□ -0.42
PALB2-206ENST00000568219 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 SSBP05455 408 aaKnown RBP eCLIP12.45□□□□□ -0.42
PALB2-206ENST00000568219 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
PALB2-206ENST00000568219 LMBR1LQ6UX01 489 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 AEBP2Q6ZN18 517 aaPredicted RBP12.45□□□□□ -0.42
PALB2-206ENST00000568219 CEP57Q86XR8 500 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 NSUN7Q8NE18 718 aaKnown RBP12.45□□□□□ -0.42
PALB2-206ENST00000568219 XAGE3Q8WTP9 111 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 PPM1EQ8WY54 764 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 LRRC59Q96AG4 307 aaKnown RBP12.45□□□□□ -0.42
PALB2-206ENST00000568219 SUGCTQ9HAC7 445 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 POLR2DO15514 142 aaKnown RBP12.45□□□□□ -0.42
PALB2-206ENST00000568219 TXLNAP40222 546 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 SF3A3Q12874 501 aaKnown RBP eCLIP12.45□□□□□ -0.42
PALB2-206ENST00000568219 CT47A1Q5JQC4 288 aaPredicted RBP12.45□□□□□ -0.42
PALB2-206ENST00000568219 BEND3Q5T5X7 828 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 RAPGEF4Q8WZA2 1011 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 DPF2Q92785 391 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 MYL10Q9BUA6 226 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 FAM204AQ9H8W3 233 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 LCMT1Q9UIC8 334 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.45□□□□□ -0.42
PALB2-206ENST00000568219 ENOX2Q16206 610 aaKnown RBP12.45□□□□□ -0.42
PALB2-206ENST00000568219 MYSM1Q5VVJ2 828 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 PSMB7Q99436 277 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 VPS16Q9H269 839 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 KCNH3Q9ULD8 1083 aa12.45□□□□□ -0.42
PALB2-206ENST00000568219 FBXO18Q8NFZ0 1043 aa12.44□□□□□ -0.42
PALB2-206ENST00000568219 LINS1Q8NG48 757 aa12.44□□□□□ -0.42
PALB2-206ENST00000568219 AFAP1L1Q8TED9 768 aa12.44□□□□□ -0.42
PALB2-206ENST00000568219 TRPM2O94759 1503 aa12.44□□□□□ -0.42
PALB2-206ENST00000568219 CDKL5O76039 1030 aa12.44□□□□□ -0.42
PALB2-206ENST00000568219 SPECC1LQ69YQ0 1117 aa12.44□□□□□ -0.42
PALB2-206ENST00000568219 SLF1Q9BQI6 1058 aa12.44□□□□□ -0.42
PALB2-206ENST00000568219 BCCIPQ9P287 314 aaKnown RBP eCLIP12.44□□□□□ -0.42
PALB2-206ENST00000568219 PCDHA5Q9Y5H7 936 aa12.44□□□□□ -0.42
PALB2-206ENST00000568219 GOLGA8AA7E2F4 631 aa12.44□□□□□ -0.42
PALB2-206ENST00000568219 PROSER3Q2NL68 480 aa12.44□□□□□ -0.42
PALB2-206ENST00000568219 RABGGTAQ92696 567 aa12.44□□□□□ -0.42
PALB2-206ENST00000568219 ABCB6Q9NP58 842 aa12.44□□□□□ -0.42
PALB2-206ENST00000568219 ICE2Q659A1 982 aa12.43□□□□□ -0.42
PALB2-206ENST00000568219 TOGARAM2Q6ZUX3 1019 aa12.43□□□□□ -0.42
PALB2-206ENST00000568219 PAG1Q9NWQ8 432 aa12.43□□□□□ -0.42
PALB2-206ENST00000568219 ENC1O14682 589 aa12.43□□□□□ -0.42
PALB2-206ENST00000568219 ADD1P35611 737 aaKnown RBP12.43□□□□□ -0.42
PALB2-206ENST00000568219 CCT5P48643 541 aa12.43□□□□□ -0.42
PALB2-206ENST00000568219 ATRIPQ8WXE1 791 aa12.43□□□□□ -0.42
PALB2-206ENST00000568219 MAGEC2Q9UBF1 373 aaPredicted RBP12.43□□□□□ -0.42
PALB2-206ENST00000568219 E7EWF7 191 aa12.43□□□□□ -0.42
PALB2-206ENST00000568219 IFIT3O14879 490 aaKnown RBP12.43□□□□□ -0.42
PALB2-206ENST00000568219 TADA3O75528 432 aa12.43□□□□□ -0.42
PALB2-206ENST00000568219 ST3GAL1Q11201 340 aa12.43□□□□□ -0.42
PALB2-206ENST00000568219 EXOC4Q96A65 974 aa12.43□□□□□ -0.42
PALB2-206ENST00000568219 EEF2KMTQ96G04 330 aa12.43□□□□□ -0.42
PALB2-206ENST00000568219 AIFM3Q96NN9 605 aa12.43□□□□□ -0.42
PALB2-206ENST00000568219 CLTCL1P53675 1640 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 PRAMEF22A3QJZ6 481 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 SOWAHDA6NJG2 315 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 EIF3CLB5ME19 914 aaKnown RBP12.42□□□□□ -0.42
PALB2-206ENST00000568219 NCOA7Q8NI08 942 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 EIF3CQ99613 913 aaKnown RBP12.42□□□□□ -0.42
PALB2-206ENST00000568219 PLCD4Q9BRC7 762 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 TTC21AQ8NDW8 1320 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 N4BP1O75113 896 aaKnown RBP12.42□□□□□ -0.42
PALB2-206ENST00000568219 SASH1O94885 1247 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 ERLIN2O94905 339 aa12.42□□□□□ -0.42
PALB2-206ENST00000568219 H2AFXP16104 143 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms