RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 LPIN2Q92539 896 aa10.21□□□□□ -0.77
HDGFL3-205ENST00000568129 CLUAP1Q96AJ1 413 aa10.21□□□□□ -0.77
HDGFL3-205ENST00000568129 GLIS2Q9BZE0 524 aaPredicted RBP10.21□□□□□ -0.77
HDGFL3-205ENST00000568129 TLL2Q9Y6L7 1015 aa10.21□□□□□ -0.77
HDGFL3-205ENST00000568129 DEFB115Q30KQ5 88 aa10.2□□□□□ -0.78
HDGFL3-205ENST00000568129 SAPCD2Q86UD0 394 aa10.2□□□□□ -0.78
HDGFL3-205ENST00000568129 USP48Q86UV5 1035 aa10.2□□□□□ -0.78
HDGFL3-205ENST00000568129 SSH3Q8TE77 659 aa10.2□□□□□ -0.78
HDGFL3-205ENST00000568129 DCPSQ96C86 337 aaKnown RBP10.2□□□□□ -0.78
HDGFL3-205ENST00000568129 CEP126Q9P2H0 1117 aa10.2□□□□□ -0.78
HDGFL3-205ENST00000568129 AKAP11Q9UKA4 1901 aa10.2□□□□□ -0.78
HDGFL3-205ENST00000568129 SUGT1Q9Y2Z0 365 aa10.2□□□□□ -0.78
HDGFL3-205ENST00000568129 ASTN2O75129 1339 aaPredicted RBP10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 PNMA6EA0A0J9YXQ4 647 aa10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 SRGAP3O43295 1099 aa10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 IFIT1P09914 478 aaKnown RBP10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 MS4A1P11836 297 aa10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 BCAMP50895 628 aa10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 HDLBPQ00341 1268 aaKnown RBP10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 NBPF9Q3BBW0 867 aa10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 CAVIN4Q5BKX8 364 aa10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 RBM26Q5T8P6 1007 aaKnown RBP10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 KRT26Q7Z3Y9 468 aa10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 TBC1D22AQ8WUA7 517 aa10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 RCAN3Q9UKA8 241 aa10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 HDAC9Q9UKV0 1011 aa10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 PA2G4Q9UQ80 394 aaKnown RBP10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 NOP58Q9Y2X3 529 aaKnown RBP10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 MYH2Q9UKX2 1941 aa10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 LAMB1P07942 1786 aa10.19□□□□□ -0.78
HDGFL3-205ENST00000568129 CELF2O95319 508 aaKnown RBP10.18□□□□□ -0.78
HDGFL3-205ENST00000568129 SLC5A1P13866 664 aa10.18□□□□□ -0.78
HDGFL3-205ENST00000568129 VEGFBP49765 207 aa10.18□□□□□ -0.78
HDGFL3-205ENST00000568129 ANGEL2Q5VTE6 544 aaKnown RBP10.18□□□□□ -0.78
HDGFL3-205ENST00000568129 KIAA0825Q8IV33 1275 aa10.18□□□□□ -0.78
HDGFL3-205ENST00000568129 GGA3Q9NZ52 723 aa10.18□□□□□ -0.78
HDGFL3-205ENST00000568129 SERPINA10Q9UK55 444 aa10.18□□□□□ -0.78
HDGFL3-205ENST00000568129 PAPPA2Q9BXP8 1791 aa10.18□□□□□ -0.78
HDGFL3-205ENST00000568129 COL1A1P02452 1464 aaPredicted RBP10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 PDS5AQ29RF7 1337 aaKnown RBP10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 SALL1Q9NSC2 1324 aa10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 SPDYE2BA6NHP3 402 aa10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 SEMA3EO15041 775 aa10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 SPDYE6P0CI01 402 aa10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 FKBP1BP68106 108 aa10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 PDE3AQ14432 1141 aa10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 ATP2B3Q16720 1220 aa10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 MFSD14BQ5SR56 506 aa10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 DLK2Q6UY11 383 aa10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 SULF1Q8IWU6 871 aa10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 FTSJ3Q8IY81 847 aaKnown RBP10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 PRMT6Q96LA8 375 aaPredicted RBP10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 SIL1Q9H173 461 aa10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 GPR108Q9NPR9 543 aa10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 MKRN1Q9UHC7 482 aaKnown RBP10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.17□□□□□ -0.78
HDGFL3-205ENST00000568129 WDR33Q9C0J8 1336 aaKnown RBP10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 ADM5C9JUS6 153 aa10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 MAP2K2P36507 400 aa10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 DLGAP5Q15398 846 aa10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 GRIK5Q16478 980 aa10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 CFAP100Q494V2 611 aa10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 VPS37DQ86XT2 251 aa10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 APOBEC3FQ8IUX4 373 aaKnown RBP10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 WDR66Q8TBY9 1149 aa10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 PANK1Q8TE04 598 aa10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 FBXW7Q969H0 707 aa10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 CDCA5Q96FF9 252 aa10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 ZBTB40Q9NUA8 1239 aa10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 AKAP2Q9Y2D5 859 aa10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 MYO5AQ9Y4I1 1855 aaKnown RBP10.16□□□□□ -0.78
HDGFL3-205ENST00000568129 ECE1P42892 770 aa10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 TIMM10P62072 90 aa10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 TFCP2Q12800 502 aa10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 MVPQ14764 893 aaKnown RBP10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 CCDC102BQ68D86 513 aa10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 HHIPL2Q6UWX4 724 aa10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 ITPRIPQ8IWB1 547 aa10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 GBA2Q9HCG7 927 aaPredicted RBP10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 WBP1LQ9NX94 342 aa10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 ABT1Q9ULW3 272 aaKnown RBP10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 TTF2Q9UNY4 1162 aaKnown RBP10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 PCDHAC2Q9Y5I4 1007 aa10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 PPP2R3BQ9Y5P8 575 aa10.15□□□□□ -0.78
HDGFL3-205ENST00000568129 AOX1Q06278 1338 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 A0A1B0GUL7 405 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 UNCXA6NJT0 531 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 FAM155AB1AL88 458 aaPredicted RBP10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 ADORA1P30542 326 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 PHKA1P46020 1223 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 G3BP1Q13283 466 aaKnown RBP eCLIP10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 MAP3K11Q16584 847 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 SPDYE2Q495Y8 402 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 FKBP1CQ5VVH2 108 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 CEP85Q6P2H3 762 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 C2orf69Q8N8R5 385 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 XAGE2Q96GT9 111 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 CAPNS2Q96L46 248 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 ZDHHC15Q96MV8 337 aa10.14□□□□□ -0.79
HDGFL3-205ENST00000568129 GNL3LQ9NVN8 582 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms