RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 MYO3BQ8WXR4 1341 aa15.7■□□□□ 0.1
GINS3-209ENST00000567909 ZNF609O15014 1411 aa15.7■□□□□ 0.1
GINS3-209ENST00000567909 ADAMTSL1Q8N6G6 1762 aa15.7■□□□□ 0.1
GINS3-209ENST00000567909 APBB1O00213 710 aa15.7■□□□□ 0.1
GINS3-209ENST00000567909 USP17L8P0C7I0 530 aa15.7■□□□□ 0.1
GINS3-209ENST00000567909 TBC1D10BQ4KMP7 808 aaPredicted RBP15.7■□□□□ 0.1
GINS3-209ENST00000567909 USP50Q70EL3 339 aaPredicted RBP15.7■□□□□ 0.1
GINS3-209ENST00000567909 LDHDQ86WU2 507 aa15.7■□□□□ 0.1
GINS3-209ENST00000567909 TRPM4Q8TD43 1214 aa15.7■□□□□ 0.1
GINS3-209ENST00000567909 XAGE2Q96GT9 111 aa15.7■□□□□ 0.1
GINS3-209ENST00000567909 GMLQ99445 158 aa15.7■□□□□ 0.1
GINS3-209ENST00000567909 F8W031 263 aaPredicted RBP15.69■□□□□ 0.1
GINS3-209ENST00000567909 PHKA1P46020 1223 aa15.69■□□□□ 0.1
GINS3-209ENST00000567909 HSP90AB4PQ58FF6 505 aa15.69■□□□□ 0.1
GINS3-209ENST00000567909 GORABQ5T7V8 394 aa15.69■□□□□ 0.1
GINS3-209ENST00000567909 CHADLQ6NUI6 762 aa15.69■□□□□ 0.1
GINS3-209ENST00000567909 KIAA0825Q8IV33 1275 aa15.69■□□□□ 0.1
GINS3-209ENST00000567909 CERS5Q8N5B7 392 aa15.69■□□□□ 0.1
GINS3-209ENST00000567909 BCL11AQ9H165 835 aa15.69■□□□□ 0.1
GINS3-209ENST00000567909 GNL3LQ9NVN8 582 aaKnown RBP15.69■□□□□ 0.1
GINS3-209ENST00000567909 FAM205AQ6ZU69 1335 aa15.68■□□□□ 0.1
GINS3-209ENST00000567909 EGFRP00533 1210 aa15.68■□□□□ 0.1
GINS3-209ENST00000567909 MFSD14BQ5SR56 506 aa15.68■□□□□ 0.1
GINS3-209ENST00000567909 CCDC102BQ68D86 513 aa15.68■□□□□ 0.1
GINS3-209ENST00000567909 ERC1Q8IUD2 1116 aa15.68■□□□□ 0.1
GINS3-209ENST00000567909 OGFOD1Q8N543 542 aa15.68■□□□□ 0.1
GINS3-209ENST00000567909 HIRAP54198 1017 aaPredicted RBP15.67■□□□□ 0.1
GINS3-209ENST00000567909 ZNF280AP59817 542 aaPredicted RBP15.67■□□□□ 0.1
GINS3-209ENST00000567909 FSTL1Q12841 308 aa15.67■□□□□ 0.1
GINS3-209ENST00000567909 KIF4BQ2VIQ3 1234 aa15.67■□□□□ 0.1
GINS3-209ENST00000567909 TNNI3KQ59H18 835 aa15.67■□□□□ 0.1
GINS3-209ENST00000567909 MAP1SQ66K74 1059 aaPredicted RBP15.67■□□□□ 0.1
GINS3-209ENST00000567909 GPR108Q9NPR9 543 aa15.67■□□□□ 0.1
GINS3-209ENST00000567909 HDAC9Q9UKV0 1011 aa15.67■□□□□ 0.1
GINS3-209ENST00000567909 PCDHB15Q9Y5E8 787 aa15.67■□□□□ 0.1
GINS3-209ENST00000567909 FPGT-TNNI3KV9GXZ4 949 aa15.67■□□□□ 0.1
GINS3-209ENST00000567909 FKBP1AP62942 108 aaKnown RBP15.66■□□□□ 0.1
GINS3-209ENST00000567909 IRX6P78412 446 aaPredicted RBP15.66■□□□□ 0.1
GINS3-209ENST00000567909 IL1RAPL2Q9NP60 686 aa15.66■□□□□ 0.1
GINS3-209ENST00000567909 MYOZ2Q9NPC6 264 aa15.66■□□□□ 0.1
GINS3-209ENST00000567909 COL1A1P02452 1464 aaPredicted RBP15.65■□□□□ 0.1
GINS3-209ENST00000567909 EXOC6Q8TAG9 804 aa15.65■□□□□ 0.1
GINS3-209ENST00000567909 RHPN1Q8TCX5 695 aa15.65■□□□□ 0.1
GINS3-209ENST00000567909 TBC1D22AQ8WUA7 517 aa15.65■□□□□ 0.1
GINS3-209ENST00000567909 DBNDD2Q9BQY9 259 aa15.65■□□□□ 0.1
GINS3-209ENST00000567909 CCDC8Q9H0W5 538 aaPredicted RBP15.65■□□□□ 0.1
GINS3-209ENST00000567909 RAB11FIP3O75154 756 aa15.64■□□□□ 0.09
GINS3-209ENST00000567909 AACSQ86V21 672 aa15.64■□□□□ 0.09
GINS3-209ENST00000567909 CNTROBQ8N137 903 aa15.64■□□□□ 0.09
GINS3-209ENST00000567909 WDR66Q8TBY9 1149 aa15.64■□□□□ 0.09
GINS3-209ENST00000567909 EAF2Q96CJ1 260 aaPredicted RBP15.64■□□□□ 0.09
GINS3-209ENST00000567909 KIF1BPQ96EK5 621 aa15.64■□□□□ 0.09
GINS3-209ENST00000567909 DENND2AQ9ULE3 1009 aa15.64■□□□□ 0.09
GINS3-209ENST00000567909 TTF2Q9UNY4 1162 aaKnown RBP15.64■□□□□ 0.09
GINS3-209ENST00000567909 SEMA3EO15041 775 aa15.63■□□□□ 0.09
GINS3-209ENST00000567909 RBM5P52756 815 aaKnown RBP eCLIP15.63■□□□□ 0.09
GINS3-209ENST00000567909 RASGRF1Q13972 1273 aa15.63■□□□□ 0.09
GINS3-209ENST00000567909 SCARF1Q14162 830 aa15.63■□□□□ 0.09
GINS3-209ENST00000567909 GRIK5Q16478 980 aa15.63■□□□□ 0.09
GINS3-209ENST00000567909 TTC39AQ5SRH9 613 aa15.63■□□□□ 0.09
GINS3-209ENST00000567909 ZC3H15Q8WU90 426 aaKnown RBP15.63■□□□□ 0.09
GINS3-209ENST00000567909 TLR7Q9NYK1 1049 aaKnown RBP15.63■□□□□ 0.09
GINS3-209ENST00000567909 DBNLQ9UJU6 430 aaKnown RBP15.63■□□□□ 0.09
GINS3-209ENST00000567909 ECM29Q5VYK3 1845 aa15.63■□□□□ 0.09
GINS3-209ENST00000567909 ASTN2O75129 1339 aaPredicted RBP15.63■□□□□ 0.09
GINS3-209ENST00000567909 TRPM7Q96QT4 1865 aa15.63■□□□□ 0.09
GINS3-209ENST00000567909 AKAP11Q9UKA4 1901 aa15.62■□□□□ 0.09
GINS3-209ENST00000567909 MMP14P50281 582 aa15.62■□□□□ 0.09
GINS3-209ENST00000567909 DLGAP5Q15398 846 aa15.62■□□□□ 0.09
GINS3-209ENST00000567909 NBPF9Q3BBW0 867 aa15.62■□□□□ 0.09
GINS3-209ENST00000567909 CCDC158Q5M9N0 1113 aa15.62■□□□□ 0.09
GINS3-209ENST00000567909 CLASRPQ8N2M8 674 aaKnown RBP15.62■□□□□ 0.09
GINS3-209ENST00000567909 GGA3Q9NZ52 723 aa15.62■□□□□ 0.09
GINS3-209ENST00000567909 WNT10BO00744 389 aa15.61■□□□□ 0.09
GINS3-209ENST00000567909 SMARCA5O60264 1052 aaPredicted RBP15.61■□□□□ 0.09
GINS3-209ENST00000567909 ITGBL1O95965 494 aaPredicted RBP15.61■□□□□ 0.09
GINS3-209ENST00000567909 UQCRFS1P1P0C7P4 283 aa15.61■□□□□ 0.09
GINS3-209ENST00000567909 CFAP100Q494V2 611 aa15.61■□□□□ 0.09
GINS3-209ENST00000567909 ANGEL2Q5VTE6 544 aaKnown RBP15.61■□□□□ 0.09
GINS3-209ENST00000567909 PI16Q6UXB8 463 aa15.61■□□□□ 0.09
GINS3-209ENST00000567909 DCPSQ96C86 337 aaKnown RBP15.61■□□□□ 0.09
GINS3-209ENST00000567909 GLIS2Q9BZE0 524 aaPredicted RBP15.61■□□□□ 0.09
GINS3-209ENST00000567909 LRRCC1Q9C099 1032 aa15.61■□□□□ 0.09
GINS3-209ENST00000567909 DCTPP1Q9H773 170 aa15.61■□□□□ 0.09
GINS3-209ENST00000567909 PGAP2Q9UHJ9 254 aa15.61■□□□□ 0.09
GINS3-209ENST00000567909 PCDHAC2Q9Y5I4 1007 aa15.61■□□□□ 0.09
GINS3-209ENST00000567909 MYO5AQ9Y4I1 1855 aaKnown RBP15.61■□□□□ 0.09
GINS3-209ENST00000567909 MYH2Q9UKX2 1941 aa15.6■□□□□ 0.09
GINS3-209ENST00000567909 TRAF5O00463 557 aa15.6■□□□□ 0.09
GINS3-209ENST00000567909 IFIT2P09913 472 aaKnown RBP15.6■□□□□ 0.09
GINS3-209ENST00000567909 HSPA6P17066 643 aa15.6■□□□□ 0.09
GINS3-209ENST00000567909 ARID4AP29374 1257 aaPredicted RBP15.6■□□□□ 0.09
GINS3-209ENST00000567909 MCAMP43121 646 aa15.6■□□□□ 0.09
GINS3-209ENST00000567909 AAMPQ13685 434 aa15.6■□□□□ 0.09
GINS3-209ENST00000567909 USP48Q86UV5 1035 aa15.6■□□□□ 0.09
GINS3-209ENST00000567909 SPATA5Q8NB90 893 aa15.6■□□□□ 0.09
GINS3-209ENST00000567909 SNRKQ9NRH2 765 aa15.6■□□□□ 0.09
GINS3-209ENST00000567909 HMG20BQ9P0W2 317 aa15.6■□□□□ 0.09
GINS3-209ENST00000567909 ABCF2Q9UG63 623 aa15.6■□□□□ 0.09
GINS3-209ENST00000567909 LDHBP07195 334 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms