RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 STRIP1Q5VSL9 837 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 C15orf52Q6ZUT6 534 aaKnown RBP6.03□□□□□ -1.44
CLK3-219ENST00000567805 KRT26Q7Z3Y9 468 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 SAPCD2Q86UD0 394 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 USP48Q86UV5 1035 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 TXNRD3Q86VQ6 643 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 OGFOD1Q8N543 542 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 DCPSQ96C86 337 aaKnown RBP6.03□□□□□ -1.44
CLK3-219ENST00000567805 KAZALD1Q96I82 304 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 SUCLG2Q96I99 432 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 ZNF408Q9H9D4 720 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 MYOZ2Q9NPC6 264 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 CNNM1Q9NRU3 951 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 BMP2KQ9NSY1 1161 aaPredicted RBP6.03□□□□□ -1.44
CLK3-219ENST00000567805 SMC4Q9NTJ3 1288 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 GGA3Q9NZ52 723 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 PAPPA2Q9BXP8 1791 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 IRS2Q9Y4H2 1338 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 AKAP11Q9UKA4 1901 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 TAF5LO75529 589 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 BRPF1P55201 1214 aaPredicted RBP6.02□□□□□ -1.45
CLK3-219ENST00000567805 MAP2K1Q02750 393 aaPredicted RBP6.02□□□□□ -1.45
CLK3-219ENST00000567805 SCARF1Q14162 830 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 RABL6Q3YEC7 729 aaPredicted RBP6.02□□□□□ -1.45
CLK3-219ENST00000567805 COL13A1Q5TAT6 717 aaPredicted RBP6.02□□□□□ -1.45
CLK3-219ENST00000567805 TTLL5Q6EMB2 1281 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 CYP4F22Q6NT55 531 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 PAXIP1Q6ZW49 1069 aaPredicted RBP6.02□□□□□ -1.45
CLK3-219ENST00000567805 ZNF804AQ7Z570 1209 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 SULF1Q8IWU6 871 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 HELBQ8NG08 1087 aaPredicted RBP6.02□□□□□ -1.45
CLK3-219ENST00000567805 FBXW7Q969H0 707 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 AIDAQ96BJ3 306 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 ZNF594Q96JF6 807 aaPredicted RBP6.02□□□□□ -1.45
CLK3-219ENST00000567805 CAPNS2Q96L46 248 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 BICC1Q9H694 974 aaKnown RBP6.02□□□□□ -1.45
CLK3-219ENST00000567805 CD209Q9NNX6 404 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 WBP1LQ9NX94 342 aa6.02□□□□□ -1.45
CLK3-219ENST00000567805 MROH5Q6ZUA9 1318 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 ADM5C9JUS6 153 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 SNAP23O00161 211 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 FOXN1O15353 648 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 IL1R1P14778 569 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 MAP2K2P36507 400 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 CTCFP49711 727 aaPredicted RBP6.01□□□□□ -1.45
CLK3-219ENST00000567805 FKBP1AP62942 108 aaKnown RBP6.01□□□□□ -1.45
CLK3-219ENST00000567805 GTF2IP78347 998 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 UBE4AQ14139 1066 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 ANGEL2Q5VTE6 544 aaKnown RBP6.01□□□□□ -1.45
CLK3-219ENST00000567805 DIEXFQ68CQ4 756 aaKnown RBP6.01□□□□□ -1.45
CLK3-219ENST00000567805 ANKRD44Q8N8A2 993 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 C2orf69Q8N8R5 385 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 KIF12Q96FN5 646 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 MXD3Q9BW11 206 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 USP44Q9H0E7 712 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 HDAC9Q9UKV0 1011 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 COLQQ9Y215 455 aaPredicted RBP6.01□□□□□ -1.45
CLK3-219ENST00000567805 RIPOR2Q9Y4F9 1068 aa6.01□□□□□ -1.45
CLK3-219ENST00000567805 ASTN2O75129 1339 aaPredicted RBP6□□□□□ -1.45
CLK3-219ENST00000567805 KIF16BQ96L93 1317 aa6□□□□□ -1.45
CLK3-219ENST00000567805 WNT10BO00744 389 aa6□□□□□ -1.45
CLK3-219ENST00000567805 PLIN1O60240 522 aa6□□□□□ -1.45
CLK3-219ENST00000567805 RARSP54136 660 aaKnown RBP6□□□□□ -1.45
CLK3-219ENST00000567805 HUNKP57058 714 aa6□□□□□ -1.45
CLK3-219ENST00000567805 GRM1Q13255 1194 aa6□□□□□ -1.45
CLK3-219ENST00000567805 NBPF9Q3BBW0 867 aa6□□□□□ -1.45
CLK3-219ENST00000567805 DLK2Q6UY11 383 aa6□□□□□ -1.45
CLK3-219ENST00000567805 KIAA0825Q8IV33 1275 aa6□□□□□ -1.45
CLK3-219ENST00000567805 MTMR14Q8NCE2 650 aa6□□□□□ -1.45
CLK3-219ENST00000567805 ARHGAP45Q92619 1136 aa6□□□□□ -1.45
CLK3-219ENST00000567805 CDCA5Q96FF9 252 aa6□□□□□ -1.45
CLK3-219ENST00000567805 BEGAINQ9BUH8 593 aa6□□□□□ -1.45
CLK3-219ENST00000567805 PUS3Q9BZE2 481 aaKnown RBP6□□□□□ -1.45
CLK3-219ENST00000567805 API5Q9BZZ5 524 aaKnown RBP6□□□□□ -1.45
CLK3-219ENST00000567805 GBA2Q9HCG7 927 aaPredicted RBP6□□□□□ -1.45
CLK3-219ENST00000567805 PRDM10Q9NQV6 1147 aa6□□□□□ -1.45
CLK3-219ENST00000567805 NOB1Q9ULX3 412 aaKnown RBP6□□□□□ -1.45
CLK3-219ENST00000567805 HDAC5Q9UQL6 1122 aa6□□□□□ -1.45
CLK3-219ENST00000567805 COL1A1P02452 1464 aaPredicted RBP6□□□□□ -1.45
CLK3-219ENST00000567805 LAMB1P07942 1786 aa6□□□□□ -1.45
CLK3-219ENST00000567805 CA12O43570 354 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 AOC2O75106 756 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 SASH1O94885 1247 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 PDE8BO95263 885 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 UBTFL1P0CB47 393 aaPredicted RBP5.99□□□□□ -1.45
CLK3-219ENST00000567805 HIBADHP31937 336 aaKnown RBP5.99□□□□□ -1.45
CLK3-219ENST00000567805 FKBP1BP68106 108 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 NOGQ13253 232 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 LRRC24Q50LG9 513 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 METTL24Q5JXM2 366 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 RGMBQ6NW40 437 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 VPS37DQ86XT2 251 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 APOBEC3FQ8IUX4 373 aaKnown RBP5.99□□□□□ -1.45
CLK3-219ENST00000567805 TNS4Q8IZW8 715 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 MIER1Q8N108 512 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 CERS5Q8N5B7 392 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 VGLL2Q8N8G2 317 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 TDRD7Q8NHU6 1098 aaKnown RBP5.99□□□□□ -1.45
CLK3-219ENST00000567805 CCDC102AQ96A19 550 aa5.99□□□□□ -1.45
CLK3-219ENST00000567805 ZBED3Q96IU2 234 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms