RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 TAF5LO75529 589 aa14□□□□□ -0.17
CDH3-206ENST00000567674 EGFRP00533 1210 aa14□□□□□ -0.17
CDH3-206ENST00000567674 UBTFL1P0CB47 393 aaPredicted RBP14□□□□□ -0.17
CDH3-206ENST00000567674 GTF2IP78347 998 aa14□□□□□ -0.17
CDH3-206ENST00000567674 APOBEC3FQ8IUX4 373 aaKnown RBP14□□□□□ -0.17
CDH3-206ENST00000567674 ZBED3Q96IU2 234 aaPredicted RBP14□□□□□ -0.17
CDH3-206ENST00000567674 GGA3Q9NZ52 723 aa14□□□□□ -0.17
CDH3-206ENST00000567674 SHTN1A0MZ66 631 aa13.99□□□□□ -0.17
CDH3-206ENST00000567674 WTIPA6NIX2 430 aaPredicted RBP13.99□□□□□ -0.17
CDH3-206ENST00000567674 WNT10BO00744 389 aa13.99□□□□□ -0.17
CDH3-206ENST00000567674 MYO1BO43795 1136 aa13.99□□□□□ -0.17
CDH3-206ENST00000567674 HDLBPQ00341 1268 aaKnown RBP13.99□□□□□ -0.17
CDH3-206ENST00000567674 RBM26Q5T8P6 1007 aaKnown RBP13.99□□□□□ -0.17
CDH3-206ENST00000567674 FBXO33Q7Z6M2 555 aa13.99□□□□□ -0.17
CDH3-206ENST00000567674 VGLL2Q8N8G2 317 aa13.99□□□□□ -0.17
CDH3-206ENST00000567674 GBA2Q9HCG7 927 aaPredicted RBP13.99□□□□□ -0.17
CDH3-206ENST00000567674 AOC2O75106 756 aa13.98□□□□□ -0.17
CDH3-206ENST00000567674 IFIT1P09914 478 aaKnown RBP13.98□□□□□ -0.17
CDH3-206ENST00000567674 NF2P35240 595 aa13.98□□□□□ -0.17
CDH3-206ENST00000567674 MTX1Q13505 466 aa13.98□□□□□ -0.17
CDH3-206ENST00000567674 PUM3Q15397 648 aaKnown RBP13.98□□□□□ -0.17
CDH3-206ENST00000567674 ANGEL2Q5VTE6 544 aaKnown RBP13.98□□□□□ -0.17
CDH3-206ENST00000567674 ZNF594Q96JF6 807 aaPredicted RBP13.98□□□□□ -0.17
CDH3-206ENST00000567674 FAM84BQ96KN1 310 aaPredicted RBP13.98□□□□□ -0.17
CDH3-206ENST00000567674 SERPINA10Q9UK55 444 aa13.98□□□□□ -0.17
CDH3-206ENST00000567674 EYA2O00167 538 aa13.97□□□□□ -0.17
CDH3-206ENST00000567674 FGFR2P21802 821 aa13.97□□□□□ -0.17
CDH3-206ENST00000567674 HUNKP57058 714 aa13.97□□□□□ -0.17
CDH3-206ENST00000567674 PTPN12Q05209 780 aaKnown RBP13.97□□□□□ -0.17
CDH3-206ENST00000567674 DLGAP5Q15398 846 aa13.97□□□□□ -0.17
CDH3-206ENST00000567674 METTL24Q5JXM2 366 aa13.97□□□□□ -0.17
CDH3-206ENST00000567674 RGMBQ6NW40 437 aa13.97□□□□□ -0.17
CDH3-206ENST00000567674 ATF7IPQ6VMQ6 1270 aa13.97□□□□□ -0.17
CDH3-206ENST00000567674 MIER1Q8N108 512 aa13.97□□□□□ -0.17
CDH3-206ENST00000567674 HELBQ8NG08 1087 aaPredicted RBP13.97□□□□□ -0.17
CDH3-206ENST00000567674 LPIN2Q92539 896 aa13.97□□□□□ -0.17
CDH3-206ENST00000567674 CDCA5Q96FF9 252 aa13.97□□□□□ -0.17
CDH3-206ENST00000567674 SPEF2Q9C093 1822 aa13.97□□□□□ -0.17
CDH3-206ENST00000567674 ZBED9Q6R2W3 1325 aa13.96□□□□□ -0.17
CDH3-206ENST00000567674 KLRK1P26718 216 aa13.96□□□□□ -0.17
CDH3-206ENST00000567674 IL15P40933 162 aaPredicted RBP13.96□□□□□ -0.17
CDH3-206ENST00000567674 RFX5P48382 616 aaPredicted RBP13.96□□□□□ -0.17
CDH3-206ENST00000567674 SOX10P56693 466 aa13.96□□□□□ -0.17
CDH3-206ENST00000567674 VPS37DQ86XT2 251 aa13.96□□□□□ -0.17
CDH3-206ENST00000567674 GCC1Q96CN9 775 aa13.96□□□□□ -0.17
CDH3-206ENST00000567674 COPRSQ9NQ92 184 aa13.96□□□□□ -0.17
CDH3-206ENST00000567674 PDE4DIPQ5VU43 2346 aa13.96□□□□□ -0.18
CDH3-206ENST00000567674 ZNF646O15015 1829 aaPredicted RBP13.95□□□□□ -0.18
CDH3-206ENST00000567674 SEMA3EO15041 775 aa13.95□□□□□ -0.18
CDH3-206ENST00000567674 FMR1Q06787 632 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDH3-206ENST00000567674 TNFAIP1Q13829 316 aa13.95□□□□□ -0.18
CDH3-206ENST00000567674 NBPF9Q3BBW0 867 aa13.95□□□□□ -0.18
CDH3-206ENST00000567674 KIAA0825Q8IV33 1275 aa13.95□□□□□ -0.18
CDH3-206ENST00000567674 PUS3Q9BZE2 481 aaKnown RBP13.95□□□□□ -0.18
CDH3-206ENST00000567674 SAGE1Q9NXZ1 904 aa13.95□□□□□ -0.18
CDH3-206ENST00000567674 MAST3O60307 1309 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 A0A1B0GUL6 1792 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 SPDYE2BA6NHP3 402 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 PLIN1O60240 522 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 IGSF3O75054 1194 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 SPDYE6P0CI01 402 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 SLC5A1P13866 664 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 SUPT20HL1Q3ZLR7 823 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 LRRC24Q50LG9 513 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 ZKSCAN2Q63HK3 967 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 FBXW7Q969H0 707 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 ZNF408Q9H9D4 720 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 CEP126Q9P2H0 1117 aa13.94□□□□□ -0.18
CDH3-206ENST00000567674 ADM5C9JUS6 153 aa13.93□□□□□ -0.18
CDH3-206ENST00000567674 MS4A1P11836 297 aa13.93□□□□□ -0.18
CDH3-206ENST00000567674 HNRNPUQ00839 825 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDH3-206ENST00000567674 MAP3K11Q16584 847 aa13.93□□□□□ -0.18
CDH3-206ENST00000567674 MFSD14BQ5SR56 506 aa13.93□□□□□ -0.18
CDH3-206ENST00000567674 ATG9AQ7Z3C6 839 aa13.93□□□□□ -0.18
CDH3-206ENST00000567674 ARMC9Q7Z3E5 817 aa13.93□□□□□ -0.18
CDH3-206ENST00000567674 CERS5Q8N5B7 392 aa13.93□□□□□ -0.18
CDH3-206ENST00000567674 WDR66Q8TBY9 1149 aa13.93□□□□□ -0.18
CDH3-206ENST00000567674 GNL3LQ9NVN8 582 aaKnown RBP13.93□□□□□ -0.18
CDH3-206ENST00000567674 AKAP2Q9Y2D5 859 aa13.93□□□□□ -0.18
CDH3-206ENST00000567674 POLR2AP24928 1970 aaKnown RBP13.92□□□□□ -0.18
CDH3-206ENST00000567674 PAPPA2Q9BXP8 1791 aa13.92□□□□□ -0.18
CDH3-206ENST00000567674 FAM155AB1AL88 458 aaPredicted RBP13.92□□□□□ -0.18
CDH3-206ENST00000567674 SNAP23O00161 211 aa13.92□□□□□ -0.18
CDH3-206ENST00000567674 GNAI2P04899 355 aa13.92□□□□□ -0.18
CDH3-206ENST00000567674 SLC10A3P09131 477 aa13.92□□□□□ -0.18
CDH3-206ENST00000567674 TRIM27P14373 513 aa13.92□□□□□ -0.18
CDH3-206ENST00000567674 ZNF157P51786 506 aaPredicted RBP13.92□□□□□ -0.18
CDH3-206ENST00000567674 FKBP1CQ5VVH2 108 aa13.92□□□□□ -0.18
CDH3-206ENST00000567674 DEFB129Q9H1M3 183 aa13.92□□□□□ -0.18
CDH3-206ENST00000567674 PDS5AQ29RF7 1337 aaKnown RBP13.91□□□□□ -0.18
CDH3-206ENST00000567674 PPP1R12BO60237 982 aaPredicted RBP13.91□□□□□ -0.18
CDH3-206ENST00000567674 FRAT2O75474 233 aaPredicted RBP13.91□□□□□ -0.18
CDH3-206ENST00000567674 GYG1P46976 350 aa13.91□□□□□ -0.18
CDH3-206ENST00000567674 INHBEP58166 350 aa13.91□□□□□ -0.18
CDH3-206ENST00000567674 CFAP100Q494V2 611 aa13.91□□□□□ -0.18
CDH3-206ENST00000567674 HHIPL2Q6UWX4 724 aa13.91□□□□□ -0.18
CDH3-206ENST00000567674 ZGPATQ8N5A5 531 aaKnown RBP13.91□□□□□ -0.18
CDH3-206ENST00000567674 HOOK2Q96ED9 719 aa13.91□□□□□ -0.18
CDH3-206ENST00000567674 MXD3Q9BW11 206 aa13.91□□□□□ -0.18
CDH3-206ENST00000567674 CASP8AP2Q9UKL3 1982 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms