RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 GTF2IP78347 998 aa14.95□□□□□ -0.02
SF3B3-208ENST00000567250 TBC1D22AQ8WUA7 517 aa14.95□□□□□ -0.02
SF3B3-208ENST00000567250 DPF2Q92785 391 aa14.95□□□□□ -0.02
SF3B3-208ENST00000567250 GCC1Q96CN9 775 aa14.95□□□□□ -0.02
SF3B3-208ENST00000567250 RWDD1Q9H446 243 aaPredicted RBP14.95□□□□□ -0.02
SF3B3-208ENST00000567250 HACL1Q9UJ83 578 aa14.95□□□□□ -0.02
SF3B3-208ENST00000567250 PDS5AQ29RF7 1337 aaKnown RBP14.94□□□□□ -0.02
SF3B3-208ENST00000567250 FAM205AQ6ZU69 1335 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 GMPSP49915 693 aaPredicted RBP14.94□□□□□ -0.02
SF3B3-208ENST00000567250 MMP14P50281 582 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 BCAMP50895 628 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 SCNN1DP51172 638 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 TIMM10P62072 90 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 CCDC158Q5M9N0 1113 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 DACT2Q5SW24 774 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 CCDC102BQ68D86 513 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 AACSQ86V21 672 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 C16orf71Q8IYS4 520 aaPredicted RBP14.94□□□□□ -0.02
SF3B3-208ENST00000567250 IL1RAPL2Q9NP60 686 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 NMRK2Q9NPI5 230 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 GPRC5DQ9NZD1 345 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 DENND2AQ9ULE3 1009 aa14.94□□□□□ -0.02
SF3B3-208ENST00000567250 ADAMTSL1Q8N6G6 1762 aa14.93□□□□□ -0.02
SF3B3-208ENST00000567250 UQCRFS1P1P0C7P4 283 aa14.93□□□□□ -0.02
SF3B3-208ENST00000567250 ADORA1P30542 326 aa14.93□□□□□ -0.02
SF3B3-208ENST00000567250 PHKA1P46020 1223 aa14.93□□□□□ -0.02
SF3B3-208ENST00000567250 KCNQ5Q9NR82 932 aa14.93□□□□□ -0.02
SF3B3-208ENST00000567250 AKAP11Q9UKA4 1901 aa14.92□□□□□ -0.02
SF3B3-208ENST00000567250 H7C1D1 291 aa14.92□□□□□ -0.02
SF3B3-208ENST00000567250 IFIT2P09913 472 aaKnown RBP14.92□□□□□ -0.02
SF3B3-208ENST00000567250 ARID4AP29374 1257 aaPredicted RBP14.92□□□□□ -0.02
SF3B3-208ENST00000567250 MFSD14BQ5SR56 506 aa14.92□□□□□ -0.02
SF3B3-208ENST00000567250 TTC39AQ5SRH9 613 aa14.92□□□□□ -0.02
SF3B3-208ENST00000567250 PNMA8AQ86V59 439 aaPredicted RBP14.92□□□□□ -0.02
SF3B3-208ENST00000567250 OGFOD1Q8N543 542 aa14.92□□□□□ -0.02
SF3B3-208ENST00000567250 ZGPATQ8N5A5 531 aaKnown RBP14.92□□□□□ -0.02
SF3B3-208ENST00000567250 WDR66Q8TBY9 1149 aa14.92□□□□□ -0.02
SF3B3-208ENST00000567250 EAF2Q96CJ1 260 aaPredicted RBP14.92□□□□□ -0.02
SF3B3-208ENST00000567250 DBNDD2Q9BQY9 259 aa14.92□□□□□ -0.02
SF3B3-208ENST00000567250 RRAGCQ9HB90 399 aa14.92□□□□□ -0.02
SF3B3-208ENST00000567250 HDAC9Q9UKV0 1011 aa14.92□□□□□ -0.02
SF3B3-208ENST00000567250 IQSEC3Q9UPP2 1182 aaPredicted RBP14.92□□□□□ -0.02
SF3B3-208ENST00000567250 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.92□□□□□ -0.02
SF3B3-208ENST00000567250 COL1A1P02452 1464 aaPredicted RBP14.92□□□□□ -0.02
SF3B3-208ENST00000567250 EPHX2P34913 555 aa14.91□□□□□ -0.02
SF3B3-208ENST00000567250 CHAF1AQ13111 956 aaPredicted RBP14.91□□□□□ -0.02
SF3B3-208ENST00000567250 MICALL2Q8IY33 904 aa14.91□□□□□ -0.02
SF3B3-208ENST00000567250 CCDC8Q9H0W5 538 aaPredicted RBP14.91□□□□□ -0.02
SF3B3-208ENST00000567250 ADARB2Q9NS39 739 aaKnown RBP14.91□□□□□ -0.02
SF3B3-208ENST00000567250 DBNLQ9UJU6 430 aaKnown RBP14.91□□□□□ -0.02
SF3B3-208ENST00000567250 ZBTB12Q9Y330 459 aaPredicted RBP14.91□□□□□ -0.02
SF3B3-208ENST00000567250 DOCK2Q92608 1830 aa14.91□□□□□ -0.02
SF3B3-208ENST00000567250 MAST3O60307 1309 aa14.91□□□□□ -0.02
SF3B3-208ENST00000567250 SALL1Q9NSC2 1324 aa14.91□□□□□ -0.02
SF3B3-208ENST00000567250 USP17L8P0C7I0 530 aa14.9□□□□□ -0.02
SF3B3-208ENST00000567250 ATXN8OSP0DMR3 200 aa14.9□□□□□ -0.02
SF3B3-208ENST00000567250 RASGRF1Q13972 1273 aa14.9□□□□□ -0.02
SF3B3-208ENST00000567250 GPATCH3Q96I76 525 aa14.9□□□□□ -0.02
SF3B3-208ENST00000567250 ZNF512BQ96KM6 892 aaPredicted RBP14.9□□□□□ -0.02
SF3B3-208ENST00000567250 TAF1DQ9H5J8 278 aaPredicted RBP14.9□□□□□ -0.02
SF3B3-208ENST00000567250 CNOT7Q9UIV1 285 aaKnown RBP14.9□□□□□ -0.02
SF3B3-208ENST00000567250 SUGT1Q9Y2Z0 365 aa14.9□□□□□ -0.02
SF3B3-208ENST00000567250 USP50Q70EL3 339 aaPredicted RBP14.89□□□□□ -0.03
SF3B3-208ENST00000567250 GMLQ99445 158 aa14.89□□□□□ -0.03
SF3B3-208ENST00000567250 TLR7Q9NYK1 1049 aaKnown RBP14.89□□□□□ -0.03
SF3B3-208ENST00000567250 JAG2Q9Y219 1238 aa14.89□□□□□ -0.03
SF3B3-208ENST00000567250 POTECB2RU33 542 aa14.88□□□□□ -0.03
SF3B3-208ENST00000567250 KIF3CO14782 793 aa14.88□□□□□ -0.03
SF3B3-208ENST00000567250 EPS15P42566 896 aa14.88□□□□□ -0.03
SF3B3-208ENST00000567250 KIAA0825Q8IV33 1275 aa14.88□□□□□ -0.03
SF3B3-208ENST00000567250 SPATA5Q8NB90 893 aa14.88□□□□□ -0.03
SF3B3-208ENST00000567250 BCL11AQ9H165 835 aa14.88□□□□□ -0.03
SF3B3-208ENST00000567250 MYH7P12883 1935 aa14.88□□□□□ -0.03
SF3B3-208ENST00000567250 TOMM70O94826 608 aa14.87□□□□□ -0.03
SF3B3-208ENST00000567250 ZNF280AP59817 542 aaPredicted RBP14.87□□□□□ -0.03
SF3B3-208ENST00000567250 KIF4BQ2VIQ3 1234 aa14.87□□□□□ -0.03
SF3B3-208ENST00000567250 EAPPQ56P03 285 aaPredicted RBP14.87□□□□□ -0.03
SF3B3-208ENST00000567250 SPTY2D1Q68D10 685 aaPredicted RBP14.87□□□□□ -0.03
SF3B3-208ENST00000567250 SAMD1Q6SPF0 538 aaPredicted RBP14.87□□□□□ -0.03
SF3B3-208ENST00000567250 LDHDQ86WU2 507 aa14.87□□□□□ -0.03
SF3B3-208ENST00000567250 SMC5Q8IY18 1101 aa14.87□□□□□ -0.03
SF3B3-208ENST00000567250 CERS5Q8N5B7 392 aa14.87□□□□□ -0.03
SF3B3-208ENST00000567250 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.87□□□□□ -0.03
SF3B3-208ENST00000567250 MXD3Q9BW11 206 aa14.87□□□□□ -0.03
SF3B3-208ENST00000567250 MYOZ2Q9NPC6 264 aa14.87□□□□□ -0.03
SF3B3-208ENST00000567250 TTF2Q9UNY4 1162 aaKnown RBP14.87□□□□□ -0.03
SF3B3-208ENST00000567250 MYH2Q9UKX2 1941 aa14.87□□□□□ -0.03
SF3B3-208ENST00000567250 IGSF3O75054 1194 aa14.86□□□□□ -0.03
SF3B3-208ENST00000567250 MCAMP43121 646 aa14.86□□□□□ -0.03
SF3B3-208ENST00000567250 ANKRD45Q5TZF3 282 aa14.86□□□□□ -0.03
SF3B3-208ENST00000567250 HMG20BQ9P0W2 317 aa14.86□□□□□ -0.03
SF3B3-208ENST00000567250 MYO5AQ9Y4I1 1855 aaKnown RBP14.86□□□□□ -0.03
SF3B3-208ENST00000567250 F8W031 263 aaPredicted RBP14.85□□□□□ -0.03
SF3B3-208ENST00000567250 SMARCA5O60264 1052 aaPredicted RBP14.85□□□□□ -0.03
SF3B3-208ENST00000567250 LDHBP07195 334 aaKnown RBP14.85□□□□□ -0.03
SF3B3-208ENST00000567250 HDLBPQ00341 1268 aaKnown RBP14.85□□□□□ -0.03
SF3B3-208ENST00000567250 DZIP1Q86YF9 867 aaKnown RBP14.85□□□□□ -0.03
SF3B3-208ENST00000567250 SLF2Q8IX21 1173 aa14.85□□□□□ -0.03
SF3B3-208ENST00000567250 SMC1BQ8NDV3 1235 aa14.85□□□□□ -0.03
SF3B3-208ENST00000567250 RBM46Q8TBY0 533 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms