RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 AOX1Q06278 1338 aa7.6□□□□□ -1.19
GINS3-206ENST00000567143 TAF5LO75529 589 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 BAG6P46379 1132 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 SCRN1Q12765 414 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 SF3A1Q15459 793 aaKnown RBP7.59□□□□□ -1.19
GINS3-206ENST00000567143 ERC1Q8IUD2 1116 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 LINS1Q8NG48 757 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 ZNF496Q96IT1 587 aaPredicted RBP7.59□□□□□ -1.19
GINS3-206ENST00000567143 USP28Q96RU2 1077 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 SCAND2PQ9GZW5 306 aaPredicted RBP7.59□□□□□ -1.19
GINS3-206ENST00000567143 N4BP2Q86UW6 1770 aaPredicted RBP7.59□□□□□ -1.19
GINS3-206ENST00000567143 SMC2O95347 1197 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 DDX58O95786 925 aaKnown RBP7.59□□□□□ -1.19
GINS3-206ENST00000567143 ZNF75DP51815 510 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 ZRSR1Q15695 479 aaKnown RBP7.59□□□□□ -1.19
GINS3-206ENST00000567143 LMBR1LQ6UX01 489 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 AOPEPQ8N6M6 819 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 CCDC112Q8NEF3 446 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 ZBTB3Q9H5J0 574 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 CNTNAP4Q9C0A0 1308 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 ARFGEF2Q9Y6D5 1785 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 GOLGA8FQ08AF8 430 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 GOLGA8DPQ0D2H9 430 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 WASHC4Q2M389 1173 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 STOX1Q6ZVD7 989 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 ZNF771Q7L3S4 317 aaPredicted RBP7.59□□□□□ -1.19
GINS3-206ENST00000567143 FSIP1Q8NA03 581 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 GOLPH3LQ9H4A5 285 aa7.59□□□□□ -1.19
GINS3-206ENST00000567143 PTPDC1A2A3K4 754 aa7.58□□□□□ -1.2
GINS3-206ENST00000567143 KINO60870 393 aaKnown RBP7.58□□□□□ -1.2
GINS3-206ENST00000567143 SKILP12757 684 aa7.58□□□□□ -1.2
GINS3-206ENST00000567143 ZSCAN20P17040 1043 aaPredicted RBP7.58□□□□□ -1.2
GINS3-206ENST00000567143 CCDC73Q6ZRK6 1079 aa7.58□□□□□ -1.2
GINS3-206ENST00000567143 SLC52A2Q9HAB3 445 aa7.58□□□□□ -1.2
GINS3-206ENST00000567143 KIAA1551Q9HCM1 1747 aa7.58□□□□□ -1.2
GINS3-206ENST00000567143 DLEC1Q9Y238 1755 aa7.58□□□□□ -1.2
GINS3-206ENST00000567143 ERICH4A6NGS2 130 aa7.58□□□□□ -1.2
GINS3-206ENST00000567143 MARCKSP29966 332 aaPredicted RBP7.58□□□□□ -1.2
GINS3-206ENST00000567143 PI16Q6UXB8 463 aa7.58□□□□□ -1.2
GINS3-206ENST00000567143 ST7Q9NRC1 585 aa7.58□□□□□ -1.2
GINS3-206ENST00000567143 SPTLC3Q9NUV7 552 aa7.58□□□□□ -1.2
GINS3-206ENST00000567143 COL15A1P39059 1388 aa7.58□□□□□ -1.2
GINS3-206ENST00000567143 NEURL1BA8MQ27 555 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 NCBP1Q09161 790 aaKnown RBP7.57□□□□□ -1.2
GINS3-206ENST00000567143 GCKRQ14397 625 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 ANKRD13DQ6ZTN6 518 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 MTERF4Q7Z6M4 381 aaKnown RBP7.57□□□□□ -1.2
GINS3-206ENST00000567143 TTC5Q8N0Z6 440 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 CCDC82Q8N4S0 544 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 TRERF1Q96PN7 1200 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 CLSTN2Q9H4D0 955 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 ATP2B1P20020 1258 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 TNNI3KQ59H18 835 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 GTF3C6Q969F1 213 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 ZNF215Q9UL58 517 aaPredicted RBP7.57□□□□□ -1.2
GINS3-206ENST00000567143 FPGT-TNNI3KV9GXZ4 949 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 CCDC69A6NI79 296 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 ANKRD1Q15327 319 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 CEP135Q66GS9 1140 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 ZNF790Q6PG37 636 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 PIGBQ92521 554 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 TM6SF1Q9BZW5 370 aa7.57□□□□□ -1.2
GINS3-206ENST00000567143 DDX19AQ9NUU7 478 aaKnown RBP7.57□□□□□ -1.2
GINS3-206ENST00000567143 ALDH1L1O75891 902 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 LMOD1P29536 600 aaPredicted RBP7.56□□□□□ -1.2
GINS3-206ENST00000567143 ELF2Q15723 593 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 LRRC24Q50LG9 513 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 CHMP4CQ96CF2 233 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 AIFM3Q96NN9 605 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 DDX21Q9NR30 783 aaKnown RBP eCLIP7.56□□□□□ -1.2
GINS3-206ENST00000567143 DENND2AQ9ULE3 1009 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 PALLDQ8WX93 1383 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 PTPN12Q05209 780 aaKnown RBP7.56□□□□□ -1.2
GINS3-206ENST00000567143 RESTQ13127 1097 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 SPECC1Q5M775 1068 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 PUS3Q9BZE2 481 aaKnown RBP7.56□□□□□ -1.2
GINS3-206ENST00000567143 ATG3Q9NT62 314 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 HIP1O00291 1037 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 APPP05067 770 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 ADRA2BP18089 450 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 PDIA6Q15084 440 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 STK38Q15208 465 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 PTPN14Q15678 1187 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 TMC6Q7Z403 805 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 HOMER1Q86YM7 354 aa7.56□□□□□ -1.2
GINS3-206ENST00000567143 SMAP1Q8IYB5 467 aaPredicted RBP7.56□□□□□ -1.2
GINS3-206ENST00000567143 CGNQ9P2M7 1197 aaKnown RBP7.56□□□□□ -1.2
GINS3-206ENST00000567143 HOXB7P09629 217 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 DPCR1Q3MIW9 517 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 MCMDC2Q4G0Z9 681 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 LRRN4CLQ8ND94 238 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 RIC1Q4ADV7 1423 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 KAT6BQ8WYB5 2073 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 UBE2Q2LH0YL09 131 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 CPLX1O14810 134 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 ZBTB22O15209 634 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 TRIM37O94972 964 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 CTDNEP1O95476 244 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 TTLL7Q6ZT98 887 aa7.55□□□□□ -1.2
GINS3-206ENST00000567143 NSUN7Q8NE18 718 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms