RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 USP17L8P0C7I0 530 aa12.7□□□□□ -0.38
GTF3C1-206ENST00000566779 GTF2IP78347 998 aa12.7□□□□□ -0.38
GTF3C1-206ENST00000566779 CYP4F22Q6NT55 531 aa12.7□□□□□ -0.38
GTF3C1-206ENST00000566779 CDC37L1Q7L3B6 337 aa12.7□□□□□ -0.38
GTF3C1-206ENST00000566779 ZNF804AQ7Z570 1209 aa12.7□□□□□ -0.38
GTF3C1-206ENST00000566779 PODNQ7Z5L7 613 aa12.7□□□□□ -0.38
GTF3C1-206ENST00000566779 AGBL3Q8NEM8 1001 aa12.7□□□□□ -0.38
GTF3C1-206ENST00000566779 KLHDC4Q8TBB5 520 aa12.7□□□□□ -0.38
GTF3C1-206ENST00000566779 FRAT1Q92837 279 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-206ENST00000566779 PUS3Q9BZE2 481 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-206ENST00000566779 F8W031 263 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-206ENST00000566779 ANGEL2Q5VTE6 544 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-206ENST00000566779 CST9Q5W186 159 aa12.69□□□□□ -0.38
GTF3C1-206ENST00000566779 KIAA0825Q8IV33 1275 aa12.69□□□□□ -0.38
GTF3C1-206ENST00000566779 SULF1Q8IWU6 871 aa12.69□□□□□ -0.38
GTF3C1-206ENST00000566779 ANKRD44Q8N8A2 993 aa12.69□□□□□ -0.38
GTF3C1-206ENST00000566779 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-206ENST00000566779 AIDAQ96BJ3 306 aa12.69□□□□□ -0.38
GTF3C1-206ENST00000566779 KAZALD1Q96I82 304 aa12.69□□□□□ -0.38
GTF3C1-206ENST00000566779 CAPNS2Q96L46 248 aa12.69□□□□□ -0.38
GTF3C1-206ENST00000566779 MYOZ2Q9NPC6 264 aa12.69□□□□□ -0.38
GTF3C1-206ENST00000566779 UBTFL1P0CB47 393 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-206ENST00000566779 SCARF1Q14162 830 aa12.68□□□□□ -0.38
GTF3C1-206ENST00000566779 METTL24Q5JXM2 366 aa12.68□□□□□ -0.38
GTF3C1-206ENST00000566779 DACT2Q5SW24 774 aa12.68□□□□□ -0.38
GTF3C1-206ENST00000566779 TTLL5Q6EMB2 1281 aa12.68□□□□□ -0.38
GTF3C1-206ENST00000566779 OGFOD1Q8N543 542 aa12.68□□□□□ -0.38
GTF3C1-206ENST00000566779 ZNF579Q8NAF0 562 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-206ENST00000566779 API5Q9BZZ5 524 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-206ENST00000566779 THSD7BQ9C0I4 1608 aa12.68□□□□□ -0.38
GTF3C1-206ENST00000566779 MYO3BQ8WXR4 1341 aa12.67□□□□□ -0.38
GTF3C1-206ENST00000566779 KIF16BQ96L93 1317 aa12.67□□□□□ -0.38
GTF3C1-206ENST00000566779 WDR33Q9C0J8 1336 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-206ENST00000566779 AKAP11Q9UKA4 1901 aa12.67□□□□□ -0.38
GTF3C1-206ENST00000566779 RASSF10A6NK89 507 aa12.67□□□□□ -0.38
GTF3C1-206ENST00000566779 GYG1P46976 350 aa12.67□□□□□ -0.38
GTF3C1-206ENST00000566779 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.384e-8■□□□□ 8.9
GTF3C1-206ENST00000566779 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-206ENST00000566779 TRMT2AQ8IZ69 625 aaKnown RBP12.67□□□□□ -0.38
GTF3C1-206ENST00000566779 USP44Q9H0E7 712 aa12.67□□□□□ -0.38
GTF3C1-206ENST00000566779 CD209Q9NNX6 404 aa12.67□□□□□ -0.38
GTF3C1-206ENST00000566779 IQSEC3Q9UPP2 1182 aaPredicted RBP12.67□□□□□ -0.38
GTF3C1-206ENST00000566779 TLL2Q9Y6L7 1015 aa12.67□□□□□ -0.38
GTF3C1-206ENST00000566779 UTYO14607 1347 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 ZNF609O15014 1411 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 AOC2O75106 756 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 CT47B1P0C2W7 299 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 ECE1P42892 770 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 PSEN1P49768 467 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 HUNKP57058 714 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 ZNF280AP59817 542 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 CHAF1AQ13111 956 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 NBPF9Q3BBW0 867 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 LRRC24Q50LG9 513 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 STRIP1Q5VSL9 837 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 VPS37DQ86XT2 251 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 CLUAP1Q96AJ1 413 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 CDCA5Q96FF9 252 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 SIL1Q9H173 461 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 HDAC9Q9UKV0 1011 aa12.66□□□□□ -0.38
GTF3C1-206ENST00000566779 AK9Q5TCS8 1911 aa12.65□□□□□ -0.38
GTF3C1-206ENST00000566779 FOXN1O15353 648 aa12.65□□□□□ -0.38
GTF3C1-206ENST00000566779 FRAT2O75474 233 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-206ENST00000566779 RBM5P52756 815 aaKnown RBP eCLIP12.65□□□□□ -0.38
GTF3C1-206ENST00000566779 TTLL12Q14166 644 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-206ENST00000566779 COL13A1Q5TAT6 717 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-206ENST00000566779 PRAMEF18Q5VWM3 479 aa12.65□□□□□ -0.38
GTF3C1-206ENST00000566779 GMLQ99445 158 aa12.65□□□□□ -0.38
GTF3C1-206ENST00000566779 GBA2Q9HCG7 927 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-206ENST00000566779 PGAP2Q9UHJ9 254 aa12.65□□□□□ -0.38
GTF3C1-206ENST00000566779 LRRFIP2Q9Y608 721 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-206ENST00000566779 PAPPA2Q9BXP8 1791 aa12.65□□□□□ -0.38
GTF3C1-206ENST00000566779 MROH5Q6ZUA9 1318 aa12.64□□□□□ -0.39
GTF3C1-206ENST00000566779 BCAR3O75815 825 aa12.64□□□□□ -0.39
GTF3C1-206ENST00000566779 RABL6Q3YEC7 729 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-206ENST00000566779 SAPCD2Q86UD0 394 aa12.64□□□□□ -0.39
GTF3C1-206ENST00000566779 C2orf69Q8N8R5 385 aa12.64□□□□□ -0.39
GTF3C1-206ENST00000566779 MEIS3Q99687 375 aa12.64□□□□□ -0.39
GTF3C1-206ENST00000566779 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
GTF3C1-206ENST00000566779 TNNQ9UQP3 1299 aa12.64□□□□□ -0.39
GTF3C1-206ENST00000566779 CASP8AP2Q9UKL3 1982 aa12.63□□□□□ -0.39
GTF3C1-206ENST00000566779 PRKG1Q13976 671 aa12.63□□□□□ -0.39
GTF3C1-206ENST00000566779 CERS5Q8N5B7 392 aa12.63□□□□□ -0.39
GTF3C1-206ENST00000566779 MFRPQ9BY79 579 aa12.63□□□□□ -0.39
GTF3C1-206ENST00000566779 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
GTF3C1-206ENST00000566779 IRS2Q9Y4H2 1338 aa12.62□□□□□ -0.39
GTF3C1-206ENST00000566779 CLRN2A0PK11 232 aa12.62□□□□□ -0.39
GTF3C1-206ENST00000566779 WNT10BO00744 389 aa12.62□□□□□ -0.39
GTF3C1-206ENST00000566779 HIBADHP31937 336 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-206ENST00000566779 UBE4AQ14139 1066 aa12.62□□□□□ -0.39
GTF3C1-206ENST00000566779 DLGAP5Q15398 846 aa12.62□□□□□ -0.39
GTF3C1-206ENST00000566779 MFSD14BQ5SR56 506 aa12.62□□□□□ -0.39
GTF3C1-206ENST00000566779 TNS4Q8IZW8 715 aa12.62□□□□□ -0.39
GTF3C1-206ENST00000566779 VEZTQ9HBM0 779 aa12.62□□□□□ -0.39
GTF3C1-206ENST00000566779 RIPOR2Q9Y4F9 1068 aa12.62□□□□□ -0.39
GTF3C1-206ENST00000566779 PCDHAC2Q9Y5I4 1007 aa12.62□□□□□ -0.39
GTF3C1-206ENST00000566779 IPO8O15397 1037 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-206ENST00000566779 IL1R1P14778 569 aa12.61□□□□□ -0.39
GTF3C1-206ENST00000566779 ZNF157P51786 506 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-206ENST00000566779 CFAP100Q494V2 611 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms