RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.71■□□□□ 0.75
CMTM3-213ENST00000566756 MYH15Q9Y2K3 1946 aa19.71■□□□□ 0.75
CMTM3-213ENST00000566756 H3BQV1 296 aa19.7■□□□□ 0.74
CMTM3-213ENST00000566756 EYA2O00167 538 aa19.7■□□□□ 0.74
CMTM3-213ENST00000566756 JAK2O60674 1132 aa19.7■□□□□ 0.74
CMTM3-213ENST00000566756 HSP90B1P14625 803 aaKnown RBP19.7■□□□□ 0.74
CMTM3-213ENST00000566756 EXOSC10Q01780 885 aaKnown RBP19.7■□□□□ 0.74
CMTM3-213ENST00000566756 CCDC57Q2TAC2 916 aa19.7■□□□□ 0.74
CMTM3-213ENST00000566756 TPRNQ4KMQ1 711 aa19.7■□□□□ 0.74
CMTM3-213ENST00000566756 IFFO2Q5TF58 517 aa19.7■□□□□ 0.74
CMTM3-213ENST00000566756 CLEC4GQ6UXB4 293 aa19.7■□□□□ 0.74
CMTM3-213ENST00000566756 DDX46Q7L014 1031 aaKnown RBP19.7■□□□□ 0.74
CMTM3-213ENST00000566756 TDRD7Q8NHU6 1098 aaKnown RBP19.7■□□□□ 0.74
CMTM3-213ENST00000566756 TRMT112Q9UI30 125 aaKnown RBP19.7■□□□□ 0.74
CMTM3-213ENST00000566756 SCRN1Q12765 414 aa19.7■□□□□ 0.74
CMTM3-213ENST00000566756 DNTTIP2Q5QJE6 756 aaKnown RBP19.7■□□□□ 0.74
CMTM3-213ENST00000566756 CCDC129Q6ZRS4 1044 aa19.7■□□□□ 0.74
CMTM3-213ENST00000566756 PGBD1Q96JS3 809 aa19.7■□□□□ 0.74
CMTM3-213ENST00000566756 ZNF830Q96NB3 372 aaPredicted RBP19.7■□□□□ 0.74
CMTM3-213ENST00000566756 SEC62Q99442 399 aaKnown RBP19.7■□□□□ 0.74
CMTM3-213ENST00000566756 TFIP11Q9UBB9 837 aaKnown RBP19.7■□□□□ 0.74
CMTM3-213ENST00000566756 CTAGE5O15320 804 aa19.69■□□□□ 0.74
CMTM3-213ENST00000566756 DTNBO60941 627 aa19.69■□□□□ 0.74
CMTM3-213ENST00000566756 IRS4O14654 1257 aaPredicted RBP19.68■□□□□ 0.74
CMTM3-213ENST00000566756 PDE8AO60658 829 aa19.68■□□□□ 0.74
CMTM3-213ENST00000566756 LRRFIP1Q32MZ4 808 aaKnown RBP19.68■□□□□ 0.74
CMTM3-213ENST00000566756 STOX1Q6ZVD7 989 aa19.68■□□□□ 0.74
CMTM3-213ENST00000566756 NSUN7Q8NE18 718 aaKnown RBP19.68■□□□□ 0.74
CMTM3-213ENST00000566756 TTLL11Q8NHH1 800 aa19.68■□□□□ 0.74
CMTM3-213ENST00000566756 ZNF652Q9Y2D9 606 aa19.68■□□□□ 0.74
CMTM3-213ENST00000566756 BRWD3Q6RI45 1802 aa19.68■□□□□ 0.74
CMTM3-213ENST00000566756 LAMB2P55268 1798 aa19.68■□□□□ 0.74
CMTM3-213ENST00000566756 FAM182BQ5T319 152 aa19.68■□□□□ 0.74
CMTM3-213ENST00000566756 ZNF274Q96GC6 653 aaPredicted RBP19.68■□□□□ 0.74
CMTM3-213ENST00000566756 CBX8Q9HC52 389 aa19.68■□□□□ 0.74
CMTM3-213ENST00000566756 RCOR1Q9UKL0 485 aa19.68■□□□□ 0.74
CMTM3-213ENST00000566756 SCN7AQ01118 1682 aa19.67■□□□□ 0.74
CMTM3-213ENST00000566756 CTSWP56202 376 aa19.67■□□□□ 0.74
CMTM3-213ENST00000566756 IFIT5Q13325 482 aaKnown RBP19.67■□□□□ 0.74
CMTM3-213ENST00000566756 CAMK4Q16566 473 aa19.67■□□□□ 0.74
CMTM3-213ENST00000566756 ANO6Q4KMQ2 910 aa19.67■□□□□ 0.74
CMTM3-213ENST00000566756 BICD2Q8TD16 824 aa19.67■□□□□ 0.74
CMTM3-213ENST00000566756 BCL11BQ9C0K0 894 aaPredicted RBP19.67■□□□□ 0.74
CMTM3-213ENST00000566756 KCNF1Q9H3M0 494 aa19.67■□□□□ 0.74
CMTM3-213ENST00000566756 SALL1Q9NSC2 1324 aa19.67■□□□□ 0.74
CMTM3-213ENST00000566756 NR1I2O75469 434 aa19.66■□□□□ 0.74
CMTM3-213ENST00000566756 RPS6KA4O75676 772 aa19.66■□□□□ 0.74
CMTM3-213ENST00000566756 FGD1P98174 961 aa19.66■□□□□ 0.74
CMTM3-213ENST00000566756 PLCB2Q00722 1185 aa19.66■□□□□ 0.74
CMTM3-213ENST00000566756 SYNE4Q8N205 404 aa19.66■□□□□ 0.74
CMTM3-213ENST00000566756 ABCC12Q96J65 1359 aa19.66■□□□□ 0.74
CMTM3-213ENST00000566756 GOLIM4O00461 696 aa19.66■□□□□ 0.74
CMTM3-213ENST00000566756 RNF113AO15541 343 aaKnown RBP19.66■□□□□ 0.74
CMTM3-213ENST00000566756 ADD1P35611 737 aaKnown RBP19.66■□□□□ 0.74
CMTM3-213ENST00000566756 EVCP57679 992 aa19.66■□□□□ 0.74
CMTM3-213ENST00000566756 SUSD4Q5VX71 490 aa19.66■□□□□ 0.74
CMTM3-213ENST00000566756 PLA2G4DQ86XP0 818 aa19.66■□□□□ 0.74
CMTM3-213ENST00000566756 FAM13BQ9NYF5 915 aa19.66■□□□□ 0.74
CMTM3-213ENST00000566756 NDUFB9Q9Y6M9 179 aa19.66■□□□□ 0.74
CMTM3-213ENST00000566756 DDX60Q8IY21 1712 aaKnown RBP19.65■□□□□ 0.74
CMTM3-213ENST00000566756 HSPD1P10809 573 aaKnown RBP19.65■□□□□ 0.74
CMTM3-213ENST00000566756 CDC25BP30305 580 aa19.65■□□□□ 0.74
CMTM3-213ENST00000566756 ZNF594Q96JF6 807 aaPredicted RBP19.65■□□□□ 0.74
CMTM3-213ENST00000566756 ZNF396Q96N95 335 aaPredicted RBP19.65■□□□□ 0.74
CMTM3-213ENST00000566756 UTP14AQ9BVJ6 771 aaKnown RBP19.65■□□□□ 0.74
CMTM3-213ENST00000566756 CCNL1Q9UK58 526 aaPredicted RBP19.65■□□□□ 0.74
CMTM3-213ENST00000566756 LRRC24Q50LG9 513 aa19.64■□□□□ 0.74
CMTM3-213ENST00000566756 LUZP1Q86V48 1076 aa19.64■□□□□ 0.74
CMTM3-213ENST00000566756 CKAP2LQ8IYA6 745 aa19.64■□□□□ 0.74
CMTM3-213ENST00000566756 NEUROD6Q96NK8 337 aa19.64■□□□□ 0.74
CMTM3-213ENST00000566756 PTPDC1A2A3K4 754 aa19.64■□□□□ 0.73
CMTM3-213ENST00000566756 E7EWF7 191 aa19.64■□□□□ 0.73
CMTM3-213ENST00000566756 CTDNEP1O95476 244 aa19.64■□□□□ 0.73
CMTM3-213ENST00000566756 IFIT1P09914 478 aaKnown RBP19.64■□□□□ 0.73
CMTM3-213ENST00000566756 RBM10P98175 930 aaKnown RBP19.64■□□□□ 0.73
CMTM3-213ENST00000566756 FAM196AQ6ZSG2 479 aa19.64■□□□□ 0.73
CMTM3-213ENST00000566756 RGS22Q8NE09 1264 aa19.64■□□□□ 0.73
CMTM3-213ENST00000566756 ZFYP08048 801 aaPredicted RBP19.63■□□□□ 0.73
CMTM3-213ENST00000566756 ZNF165P49910 485 aa19.63■□□□□ 0.73
CMTM3-213ENST00000566756 CTNNA3Q9UI47 895 aa19.63■□□□□ 0.73
CMTM3-213ENST00000566756 NIP7Q9Y221 180 aaKnown RBP eCLIP19.63■□□□□ 0.73
CMTM3-213ENST00000566756 MAST3O60307 1309 aa19.63■□□□□ 0.73
CMTM3-213ENST00000566756 C4BP0C0L5 1744 aa19.63■□□□□ 0.73
CMTM3-213ENST00000566756 ANKRD18BA2A2Z9 1011 aa19.63■□□□□ 0.73
CMTM3-213ENST00000566756 CHGBP05060 677 aa19.63■□□□□ 0.73
CMTM3-213ENST00000566756 ZNF75DP51815 510 aa19.63■□□□□ 0.73
CMTM3-213ENST00000566756 SARM1Q6SZW1 724 aa19.63■□□□□ 0.73
CMTM3-213ENST00000566756 MPNDQ8N594 471 aa19.63■□□□□ 0.73
CMTM3-213ENST00000566756 PUS3Q9BZE2 481 aaKnown RBP19.63■□□□□ 0.73
CMTM3-213ENST00000566756 CEP126Q9P2H0 1117 aa19.63■□□□□ 0.73
CMTM3-213ENST00000566756 A0A1B0GUL7 405 aa19.62■□□□□ 0.73
CMTM3-213ENST00000566756 NTSR2O95665 410 aa19.62■□□□□ 0.73
CMTM3-213ENST00000566756 ITGA6P23229 1130 aa19.62■□□□□ 0.73
CMTM3-213ENST00000566756 KCNQ4P56696 695 aa19.62■□□□□ 0.73
CMTM3-213ENST00000566756 TIMM10P62072 90 aa19.62■□□□□ 0.73
CMTM3-213ENST00000566756 ZNF772Q68DY9 489 aaPredicted RBP19.62■□□□□ 0.73
CMTM3-213ENST00000566756 DDX11Q96FC9 970 aa19.62■□□□□ 0.73
CMTM3-213ENST00000566756 GREM2Q9H772 168 aa19.62■□□□□ 0.73
CMTM3-213ENST00000566756 NARFQ9UHQ1 456 aa19.62■□□□□ 0.73
CMTM3-213ENST00000566756 PYCARDQ9ULZ3 195 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms