RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 KIF1BO60333 1816 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 MRPL12P52815 198 aaKnown RBP3.33□□□□□ -1.88
CHD9-218ENST00000566029 NAIF1Q69YI7 327 aaPredicted RBP3.33□□□□□ -1.88
CHD9-218ENST00000566029 GOLGA1Q92805 767 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 MRFAP1Q9Y605 127 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 GCFC2P16383 781 aaKnown RBP3.33□□□□□ -1.88
CHD9-218ENST00000566029 ADD1P35611 737 aaKnown RBP3.33□□□□□ -1.88
CHD9-218ENST00000566029 TXLNAP40222 546 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 SLC5A9Q2M3M2 681 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 PGBD1Q96JS3 809 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 SWAP70Q9UH65 585 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 PRPF6O94906 941 aaKnown RBP3.33□□□□□ -1.88
CHD9-218ENST00000566029 RPS6KA3P51812 740 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 RWDD2BP57060 319 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 ZBTB16Q05516 673 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 WDR24Q96S15 920 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 TCHPQ9BT92 498 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 SCAND2PQ9GZW5 306 aaPredicted RBP3.33□□□□□ -1.88
CHD9-218ENST00000566029 PPP2R2CQ9Y2T4 447 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 N4BP1O75113 896 aaKnown RBP3.33□□□□□ -1.88
CHD9-218ENST00000566029 IFIT2P09913 472 aaKnown RBP3.33□□□□□ -1.88
CHD9-218ENST00000566029 CPEP16870 476 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 IRAK1P51617 712 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 HLTFQ14527 1009 aaKnown RBP eCLIP3.33□□□□□ -1.883e-7■■□□□ 11.9
CHD9-218ENST00000566029 POTEDQ86YR6 584 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 MEIS3Q99687 375 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 GOLPH3LQ9H4A5 285 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 DKK3Q9UBP4 350 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 GRIN2DO15399 1336 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 CDHR2Q9BYE9 1310 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 RASSF9O75901 435 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 PPFIA1Q13136 1202 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 XPO4Q9C0E2 1151 aaKnown RBP3.32□□□□□ -1.88
CHD9-218ENST00000566029 PNPLA6Q8IY17 1366 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 EME2A4GXA9 379 aaPredicted RBP3.32□□□□□ -1.88
CHD9-218ENST00000566029 PPFIA3O75145 1194 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 CPA1P15085 419 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 DHX58Q96C10 678 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 RNF17Q9BXT8 1623 aaKnown RBP3.32□□□□□ -1.88
CHD9-218ENST00000566029 FECHP22830 423 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 ZBTB41Q5SVQ8 909 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 CC2D2BQ6DHV5 1058 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 CCDC82Q8N4S0 544 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 CARNS1A5YM72 827 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 MYBL2P10244 700 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 CCNHP51946 323 aaPredicted RBP3.32□□□□□ -1.88
CHD9-218ENST00000566029 SCRN1Q12765 414 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 CCDC26Q8TAB7 109 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 PPM1FP49593 454 aaPredicted RBP3.32□□□□□ -1.88
CHD9-218ENST00000566029 ATP8B2P98198 1209 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 TBX2Q13207 712 aaPredicted RBP3.32□□□□□ -1.88
CHD9-218ENST00000566029 SLC9A5Q14940 896 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 CCDC83Q8IWF9 413 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 BICD2Q8TD16 824 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 CABS1Q96KC9 395 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 PAGR1Q9BTK6 254 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 UBA5Q9GZZ9 404 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 DYTNA2CJ06 578 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 H7C1W4 665 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 DIAPH1O60610 1272 aaKnown RBP3.32□□□□□ -1.88
CHD9-218ENST00000566029 HMMRO75330 724 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 KIF4AO95239 1232 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 HNRNPMP52272 730 aaKnown RBP eCLIP3.32□□□□□ -1.887e-7■■■■□ 21.6
CHD9-218ENST00000566029 SMTNP53814 917 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 SETDB1Q15047 1291 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 FMR1NBQ8N0W7 255 aaPredicted RBP3.32□□□□□ -1.88
CHD9-218ENST00000566029 C8orf58Q8NAV2 365 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 ABCC1P33527 1531 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 PPFIA2O75334 1257 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 NCAPHQ15003 741 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 LONRF3Q496Y0 759 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 HDXQ7Z353 690 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 ZNF513Q8N8E2 541 aaPredicted RBP3.32□□□□□ -1.88
CHD9-218ENST00000566029 MYO1FO00160 1098 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 RNF40O75150 1001 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 SNUPNO95149 360 aaKnown RBP3.32□□□□□ -1.88
CHD9-218ENST00000566029 FBXW10Q5XX13 1052 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 GBP6Q6ZN66 633 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 SRGAP1Q7Z6B7 1085 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 CDK5RAP3Q96JB5 506 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.32□□□□□ -1.884e-10■■■■□ 20.7
CHD9-218ENST00000566029 CD163L1Q9NR16 1453 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 KDRP35968 1356 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 COQ9O75208 318 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 TUBB2AQ13885 445 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 CRYMQ14894 314 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 RINLQ6ZS11 566 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 MICAL1Q8TDZ2 1067 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 TUBB2BQ9BVA1 445 aa3.32□□□□□ -1.88
CHD9-218ENST00000566029 BICC1Q9H694 974 aaKnown RBP3.32□□□□□ -1.88
CHD9-218ENST00000566029 CUTAO60888 179 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 KRT18P05783 430 aaKnown RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 HOOK3Q86VS8 718 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 FAM204AQ9H8W3 233 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 A0A1W2PQ27 194 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 A0A1W2PQ64 194 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 A0A1W2PQD8 194 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 FAM163BP0C2L3 166 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 INPP5BP32019 993 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 USP14P54578 494 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms