RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 ZC3H15Q8WU90 426 aaKnown RBP15.49■□□□□ 0.07
SHCBP1-204ENST00000565887 XAGE2Q96GT9 111 aa15.49■□□□□ 0.07
SHCBP1-204ENST00000565887 DENND2AQ9ULE3 1009 aa15.49■□□□□ 0.07
SHCBP1-204ENST00000565887 SUGT1Q9Y2Z0 365 aa15.49■□□□□ 0.07
SHCBP1-204ENST00000565887 ZBTB12Q9Y330 459 aaPredicted RBP15.49■□□□□ 0.07
SHCBP1-204ENST00000565887 UQCRFS1P1P0C7P4 283 aa15.48■□□□□ 0.07
SHCBP1-204ENST00000565887 ZNF280AP59817 542 aaPredicted RBP15.48■□□□□ 0.07
SHCBP1-204ENST00000565887 TNNI3KQ59H18 835 aa15.48■□□□□ 0.07
SHCBP1-204ENST00000565887 CCDC158Q5M9N0 1113 aa15.48■□□□□ 0.07
SHCBP1-204ENST00000565887 MICALL2Q8IY33 904 aa15.48■□□□□ 0.07
SHCBP1-204ENST00000565887 CLASRPQ8N2M8 674 aaKnown RBP15.48■□□□□ 0.07
SHCBP1-204ENST00000565887 SMC1BQ8NDV3 1235 aa15.48■□□□□ 0.07
SHCBP1-204ENST00000565887 RHPN1Q8TCX5 695 aa15.48■□□□□ 0.07
SHCBP1-204ENST00000565887 DCTPP1Q9H773 170 aa15.48■□□□□ 0.07
SHCBP1-204ENST00000565887 EXOC6BQ9Y2D4 811 aa15.48■□□□□ 0.07
SHCBP1-204ENST00000565887 FPGT-TNNI3KV9GXZ4 949 aa15.48■□□□□ 0.07
SHCBP1-204ENST00000565887 CCDC102BQ68D86 513 aa15.47■□□□□ 0.07
SHCBP1-204ENST00000565887 ZGPATQ8N5A5 531 aaKnown RBP15.47■□□□□ 0.07
SHCBP1-204ENST00000565887 PDS5AQ29RF7 1337 aaKnown RBP15.46■□□□□ 0.07
SHCBP1-204ENST00000565887 PSME4Q14997 1843 aa15.46■□□□□ 0.07
SHCBP1-204ENST00000565887 IGSF3O75054 1194 aa15.46■□□□□ 0.07
SHCBP1-204ENST00000565887 CENPBP07199 599 aaPredicted RBP15.46■□□□□ 0.07
SHCBP1-204ENST00000565887 EAPPQ56P03 285 aaPredicted RBP15.46■□□□□ 0.07
SHCBP1-204ENST00000565887 MFSD14BQ5SR56 506 aa15.46■□□□□ 0.07
SHCBP1-204ENST00000565887 CHADLQ6NUI6 762 aa15.46■□□□□ 0.07
SHCBP1-204ENST00000565887 ZNF512BQ96KM6 892 aaPredicted RBP15.46■□□□□ 0.07
SHCBP1-204ENST00000565887 MRIQ9BWK5 157 aa15.46■□□□□ 0.07
SHCBP1-204ENST00000565887 RWDD1Q9H446 243 aaPredicted RBP15.46■□□□□ 0.07
SHCBP1-204ENST00000565887 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
SHCBP1-204ENST00000565887 PCDHB15Q9Y5E8 787 aa15.46■□□□□ 0.07
SHCBP1-204ENST00000565887 SCN9AQ15858 1988 aa15.45■□□□□ 0.06
SHCBP1-204ENST00000565887 HDAC1Q13547 482 aaPredicted RBP15.45■□□□□ 0.06
SHCBP1-204ENST00000565887 LRRCC1Q9C099 1032 aa15.45■□□□□ 0.06
SHCBP1-204ENST00000565887 PGAP2Q9UHJ9 254 aa15.45■□□□□ 0.06
SHCBP1-204ENST00000565887 MAST3O60307 1309 aa15.44■□□□□ 0.06
SHCBP1-204ENST00000565887 IFIT2P09913 472 aaKnown RBP15.44■□□□□ 0.06
SHCBP1-204ENST00000565887 ADORA1P30542 326 aa15.44■□□□□ 0.06
SHCBP1-204ENST00000565887 PHKA1P46020 1223 aa15.44■□□□□ 0.06
SHCBP1-204ENST00000565887 HDLBPQ00341 1268 aaKnown RBP15.44■□□□□ 0.06
SHCBP1-204ENST00000565887 CHAF1AQ13111 956 aaPredicted RBP15.44■□□□□ 0.06
SHCBP1-204ENST00000565887 SPTY2D1Q68D10 685 aaPredicted RBP15.44■□□□□ 0.06
SHCBP1-204ENST00000565887 GCC1Q96CN9 775 aa15.44■□□□□ 0.06
SHCBP1-204ENST00000565887 MYOZ2Q9NPC6 264 aa15.44■□□□□ 0.06
SHCBP1-204ENST00000565887 ZBTB47Q9UFB7 747 aaPredicted RBP15.44■□□□□ 0.06
SHCBP1-204ENST00000565887 SALL1Q9NSC2 1324 aa15.43■□□□□ 0.06
SHCBP1-204ENST00000565887 ARID4AP29374 1257 aaPredicted RBP15.43■□□□□ 0.06
SHCBP1-204ENST00000565887 C1QTNF8P60827 252 aa15.43■□□□□ 0.06
SHCBP1-204ENST00000565887 KIF4BQ2VIQ3 1234 aa15.43■□□□□ 0.06
SHCBP1-204ENST00000565887 TTC39AQ5SRH9 613 aa15.43■□□□□ 0.06
SHCBP1-204ENST00000565887 AACSQ86V21 672 aa15.43■□□□□ 0.06
SHCBP1-204ENST00000565887 KIAA0825Q8IV33 1275 aa15.43■□□□□ 0.06
SHCBP1-204ENST00000565887 MTMR14Q8NCE2 650 aa15.43■□□□□ 0.06
SHCBP1-204ENST00000565887 EXOC6Q8TAG9 804 aa15.43■□□□□ 0.06
SHCBP1-204ENST00000565887 EAF2Q96CJ1 260 aaPredicted RBP15.43■□□□□ 0.06
SHCBP1-204ENST00000565887 IQSEC3Q9UPP2 1182 aaPredicted RBP15.43■□□□□ 0.06
SHCBP1-204ENST00000565887 DLGAP5Q15398 846 aa15.42■□□□□ 0.06
SHCBP1-204ENST00000565887 SAMD7Q7Z3H4 446 aa15.42■□□□□ 0.06
SHCBP1-204ENST00000565887 SLF2Q8IX21 1173 aa15.42■□□□□ 0.06
SHCBP1-204ENST00000565887 CERS5Q8N5B7 392 aa15.42■□□□□ 0.06
SHCBP1-204ENST00000565887 SERPINA10Q9UK55 444 aa15.42■□□□□ 0.06
SHCBP1-204ENST00000565887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.42■□□□□ 0.06
SHCBP1-204ENST00000565887 MYO1BO43795 1136 aa15.41■□□□□ 0.06
SHCBP1-204ENST00000565887 TBC1D10BQ4KMP7 808 aaPredicted RBP15.41■□□□□ 0.06
SHCBP1-204ENST00000565887 RBM26Q5T8P6 1007 aaKnown RBP15.41■□□□□ 0.06
SHCBP1-204ENST00000565887 SPATA5Q8NB90 893 aa15.41■□□□□ 0.06
SHCBP1-204ENST00000565887 DCPSQ96C86 337 aaKnown RBP15.41■□□□□ 0.06
SHCBP1-204ENST00000565887 DBNDD2Q9BQY9 259 aa15.41■□□□□ 0.06
SHCBP1-204ENST00000565887 MXD3Q9BW11 206 aa15.41■□□□□ 0.06
SHCBP1-204ENST00000565887 CCDC8Q9H0W5 538 aaPredicted RBP15.41■□□□□ 0.06
SHCBP1-204ENST00000565887 IL1RAPL2Q9NP60 686 aa15.41■□□□□ 0.06
SHCBP1-204ENST00000565887 TTF2Q9UNY4 1162 aaKnown RBP15.41■□□□□ 0.06
SHCBP1-204ENST00000565887 APBB1O00213 710 aa15.4■□□□□ 0.06
SHCBP1-204ENST00000565887 LDHBP07195 334 aaKnown RBP15.4■□□□□ 0.06
SHCBP1-204ENST00000565887 HIRAP54198 1017 aaPredicted RBP15.4■□□□□ 0.06
SHCBP1-204ENST00000565887 RASGRF1Q13972 1273 aa15.4■□□□□ 0.06
SHCBP1-204ENST00000565887 TMED8Q6PL24 325 aaPredicted RBP15.4■□□□□ 0.06
SHCBP1-204ENST00000565887 CDC37L1Q7L3B6 337 aa15.4■□□□□ 0.06
SHCBP1-204ENST00000565887 CNTROBQ8N137 903 aa15.4■□□□□ 0.06
SHCBP1-204ENST00000565887 DBNLQ9UJU6 430 aaKnown RBP15.4■□□□□ 0.06
SHCBP1-204ENST00000565887 PITPNM2Q9BZ72 1349 aa15.4■□□□□ 0.06
SHCBP1-204ENST00000565887 SCARF1Q14162 830 aa15.39■□□□□ 0.05
SHCBP1-204ENST00000565887 HHIPL2Q6UWX4 724 aa15.39■□□□□ 0.05
SHCBP1-204ENST00000565887 TRPM4Q8TD43 1214 aa15.39■□□□□ 0.05
SHCBP1-204ENST00000565887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.39■□□□□ 0.05
SHCBP1-204ENST00000565887 TEKT1Q969V4 418 aa15.39■□□□□ 0.05
SHCBP1-204ENST00000565887 HMG20BQ9P0W2 317 aa15.39■□□□□ 0.05
SHCBP1-204ENST00000565887 JAG2Q9Y219 1238 aa15.39■□□□□ 0.05
SHCBP1-204ENST00000565887 ARAP2Q8WZ64 1704 aa15.39■□□□□ 0.05
SHCBP1-204ENST00000565887 SHTN1A0MZ66 631 aa15.38■□□□□ 0.05
SHCBP1-204ENST00000565887 F8W031 263 aaPredicted RBP15.38■□□□□ 0.05
SHCBP1-204ENST00000565887 WNT10BO00744 389 aa15.38■□□□□ 0.05
SHCBP1-204ENST00000565887 RBM5P52756 815 aaKnown RBP eCLIP15.38■□□□□ 0.05
SHCBP1-204ENST00000565887 GSTO1P78417 241 aa15.38■□□□□ 0.05
SHCBP1-204ENST00000565887 CFAP100Q494V2 611 aa15.38■□□□□ 0.05
SHCBP1-204ENST00000565887 ERICH6Q7L0X2 663 aa15.38■□□□□ 0.05
SHCBP1-204ENST00000565887 GPATCH3Q96I76 525 aa15.38■□□□□ 0.05
SHCBP1-204ENST00000565887 ITGBL1O95965 494 aaPredicted RBP15.37■□□□□ 0.05
SHCBP1-204ENST00000565887 LDHCP07864 332 aa15.37■□□□□ 0.05
SHCBP1-204ENST00000565887 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
SHCBP1-204ENST00000565887 POTEJP0CG39 1038 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms