RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 PGAP2Q9UHJ9 254 aa12.39□□□□□ -0.43
CNOT1-208ENST00000565697 PSME4Q14997 1843 aa12.39□□□□□ -0.43
CNOT1-208ENST00000565697 SCN9AQ15858 1988 aa12.38□□□□□ -0.43
CNOT1-208ENST00000565697 WTIPA6NIX2 430 aaPredicted RBP12.38□□□□□ -0.43
CNOT1-208ENST00000565697 BCAR3O75815 825 aa12.38□□□□□ -0.43
CNOT1-208ENST00000565697 USP17L8P0C7I0 530 aa12.38□□□□□ -0.43
CNOT1-208ENST00000565697 IRX5P78411 483 aaPredicted RBP12.38□□□□□ -0.43
CNOT1-208ENST00000565697 TTLL5Q6EMB2 1281 aa12.38□□□□□ -0.43
CNOT1-208ENST00000565697 TXNRD3Q86VQ6 643 aa12.38□□□□□ -0.43
CNOT1-208ENST00000565697 DNAJC5GQ8N7S2 189 aa12.38□□□□□ -0.43
CNOT1-208ENST00000565697 FBXW7Q969H0 707 aa12.38□□□□□ -0.43
CNOT1-208ENST00000565697 CD209Q9NNX6 404 aa12.38□□□□□ -0.43
CNOT1-208ENST00000565697 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
CNOT1-208ENST00000565697 RIPOR2Q9Y4F9 1068 aa12.38□□□□□ -0.43
CNOT1-208ENST00000565697 TRIM27P14373 513 aa12.37□□□□□ -0.43
CNOT1-208ENST00000565697 ZNF280AP59817 542 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-208ENST00000565697 HTRA3P83110 453 aa12.37□□□□□ -0.43
CNOT1-208ENST00000565697 KIF4BQ2VIQ3 1234 aa12.37□□□□□ -0.43
CNOT1-208ENST00000565697 METTL24Q5JXM2 366 aa12.37□□□□□ -0.43
CNOT1-208ENST00000565697 CDC37L1Q7L3B6 337 aa12.37□□□□□ -0.43
CNOT1-208ENST00000565697 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
CNOT1-208ENST00000565697 OGFOD1Q8N543 542 aa12.37□□□□□ -0.43
CNOT1-208ENST00000565697 TRPM4Q8TD43 1214 aa12.37□□□□□ -0.43
CNOT1-208ENST00000565697 PUS3Q9BZE2 481 aaKnown RBP12.37□□□□□ -0.43
CNOT1-208ENST00000565697 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.37□□□□□ -0.43
CNOT1-208ENST00000565697 KLRK1P26718 216 aa12.36□□□□□ -0.43
CNOT1-208ENST00000565697 HIRAP54198 1017 aaPredicted RBP12.36□□□□□ -0.43
CNOT1-208ENST00000565697 TBC1D10BQ4KMP7 808 aaPredicted RBP12.36□□□□□ -0.43
CNOT1-208ENST00000565697 DACT2Q5SW24 774 aa12.36□□□□□ -0.43
CNOT1-208ENST00000565697 RBM26Q5T8P6 1007 aaKnown RBP12.36□□□□□ -0.43
CNOT1-208ENST00000565697 DCPSQ96C86 337 aaKnown RBP12.36□□□□□ -0.43
CNOT1-208ENST00000565697 GMLQ99445 158 aa12.36□□□□□ -0.43
CNOT1-208ENST00000565697 HDAC9Q9UKV0 1011 aa12.36□□□□□ -0.43
CNOT1-208ENST00000565697 LRRFIP2Q9Y608 721 aaKnown RBP12.36□□□□□ -0.43
CNOT1-208ENST00000565697 A0A1B0GUL6 1792 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 SHTN1A0MZ66 631 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 EYA2O00167 538 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 PDE8BO95263 885 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 IL1R1P14778 569 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 GTF2IP78347 998 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 LRRC24Q50LG9 513 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 CAVIN4Q5BKX8 364 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 FTSJ3Q8IY81 847 aaKnown RBP12.35□□□□□ -0.43
CNOT1-208ENST00000565697 CLUAP1Q96AJ1 413 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 MEIS3Q99687 375 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 OCEL1Q9H607 264 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 MYOZ2Q9NPC6 264 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 IRS2Q9Y4H2 1338 aa12.35□□□□□ -0.43
CNOT1-208ENST00000565697 SNAP23O00161 211 aa12.34□□□□□ -0.43
CNOT1-208ENST00000565697 IFIT1P09914 478 aaKnown RBP12.34□□□□□ -0.43
CNOT1-208ENST00000565697 MS4A1P11836 297 aa12.34□□□□□ -0.43
CNOT1-208ENST00000565697 HIBADHP31937 336 aaKnown RBP12.34□□□□□ -0.43
CNOT1-208ENST00000565697 RFX5P48382 616 aaPredicted RBP12.34□□□□□ -0.43
CNOT1-208ENST00000565697 FKBP1AP62942 108 aaKnown RBP12.34□□□□□ -0.43
CNOT1-208ENST00000565697 PTPN12Q05209 780 aaKnown RBP12.34□□□□□ -0.43
CNOT1-208ENST00000565697 VPS37DQ86XT2 251 aa12.34□□□□□ -0.43
CNOT1-208ENST00000565697 JMYQ8N9B5 988 aa12.34□□□□□ -0.43
CNOT1-208ENST00000565697 CIAO1O76071 339 aa12.33□□□□□ -0.44
CNOT1-208ENST00000565697 SASH1O94885 1247 aa12.33□□□□□ -0.44
CNOT1-208ENST00000565697 GNAI2P04899 355 aa12.33□□□□□ -0.44
CNOT1-208ENST00000565697 SCARF1Q14162 830 aa12.33□□□□□ -0.44
CNOT1-208ENST00000565697 PUM3Q15397 648 aaKnown RBP12.33□□□□□ -0.44
CNOT1-208ENST00000565697 SULF1Q8IWU6 871 aa12.33□□□□□ -0.44
CNOT1-208ENST00000565697 DZIP1LQ8IYY4 767 aaKnown RBP12.33□□□□□ -0.44
CNOT1-208ENST00000565697 VGLL2Q8N8G2 317 aa12.33□□□□□ -0.44
CNOT1-208ENST00000565697 KLHDC4Q8TBB5 520 aa12.33□□□□□ -0.44
CNOT1-208ENST00000565697 GLIS2Q9BZE0 524 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-208ENST00000565697 ABT1Q9ULW3 272 aaKnown RBP12.33□□□□□ -0.44
CNOT1-208ENST00000565697 CNTNAP1P78357 1384 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 TRPM7Q96QT4 1865 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 TRAF5O00463 557 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 CELF2O95319 508 aaKnown RBP12.32□□□□□ -0.44
CNOT1-208ENST00000565697 EGFRP00533 1210 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 IL15P40933 162 aaPredicted RBP12.32□□□□□ -0.44
CNOT1-208ENST00000565697 GYG1P46976 350 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 DEFB115Q30KQ5 88 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 KRT26Q7Z3Y9 468 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 USP48Q86UV5 1035 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 TMEM57Q8N5G2 664 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 TDRD7Q8NHU6 1098 aaKnown RBP12.32□□□□□ -0.44
CNOT1-208ENST00000565697 FAM84BQ96KN1 310 aaPredicted RBP12.32□□□□□ -0.44
CNOT1-208ENST00000565697 COPRSQ9NQ92 184 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 CEP126Q9P2H0 1117 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 MKRN1Q9UHC7 482 aaKnown RBP12.32□□□□□ -0.44
CNOT1-208ENST00000565697 PITPNM2Q9BZ72 1349 aa12.32□□□□□ -0.44
CNOT1-208ENST00000565697 RASSF10A6NK89 507 aa12.31□□□□□ -0.44
CNOT1-208ENST00000565697 SRGAP3O43295 1099 aa12.31□□□□□ -0.44
CNOT1-208ENST00000565697 FRAT2O75474 233 aaPredicted RBP12.31□□□□□ -0.44
CNOT1-208ENST00000565697 SLC5A1P13866 664 aa12.31□□□□□ -0.44
CNOT1-208ENST00000565697 MTX1Q13505 466 aa12.31□□□□□ -0.44
CNOT1-208ENST00000565697 FBXO33Q7Z6M2 555 aa12.31□□□□□ -0.44
CNOT1-208ENST00000565697 KIAA0825Q8IV33 1275 aa12.31□□□□□ -0.44
CNOT1-208ENST00000565697 LPIN2Q92539 896 aa12.31□□□□□ -0.44
CNOT1-208ENST00000565697 MXD3Q9BW11 206 aa12.31□□□□□ -0.44
CNOT1-208ENST00000565697 GGA3Q9NZ52 723 aa12.31□□□□□ -0.44
CNOT1-208ENST00000565697 FAM205AQ6ZU69 1335 aa12.31□□□□□ -0.44
CNOT1-208ENST00000565697 FGFR2P21802 821 aa12.3□□□□□ -0.44
CNOT1-208ENST00000565697 ECE1P42892 770 aa12.3□□□□□ -0.44
CNOT1-208ENST00000565697 ANGEL2Q5VTE6 544 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms