RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 TRPM7Q96QT4 1865 aa23.21■■□□□ 1.31
CMTM3-210ENST00000565666 FAM205AQ6ZU69 1335 aa23.2■■□□□ 1.3
CMTM3-210ENST00000565666 MMP14P50281 582 aa23.2■■□□□ 1.3
CMTM3-210ENST00000565666 BCAMP50895 628 aa23.2■■□□□ 1.3
CMTM3-210ENST00000565666 FKBP1AP62942 108 aaKnown RBP23.2■■□□□ 1.3
CMTM3-210ENST00000565666 FMR1Q06787 632 aaKnown RBP eCLIP23.2■■□□□ 1.3
CMTM3-210ENST00000565666 SCARF1Q14162 830 aa23.2■■□□□ 1.3
CMTM3-210ENST00000565666 MVPQ14764 893 aaKnown RBP23.2■■□□□ 1.3
CMTM3-210ENST00000565666 CERS5Q8N5B7 392 aa23.2■■□□□ 1.3
CMTM3-210ENST00000565666 GGA3Q9NZ52 723 aa23.2■■□□□ 1.3
CMTM3-210ENST00000565666 COG6Q9Y2V7 657 aa23.2■■□□□ 1.3
CMTM3-210ENST00000565666 F8W031 263 aaPredicted RBP23.19■■□□□ 1.3
CMTM3-210ENST00000565666 ATP8B2P98198 1209 aa23.19■■□□□ 1.3
CMTM3-210ENST00000565666 CHAF1AQ13111 956 aaPredicted RBP23.19■■□□□ 1.3
CMTM3-210ENST00000565666 G3BP1Q13283 466 aaKnown RBP eCLIP23.19■■□□□ 1.3
CMTM3-210ENST00000565666 USP48Q86UV5 1035 aa23.19■■□□□ 1.3
CMTM3-210ENST00000565666 DDX19BQ9UMR2 479 aa23.19■■□□□ 1.3
CMTM3-210ENST00000565666 MYH13Q9UKX3 1938 aa23.19■■□□□ 1.3
CMTM3-210ENST00000565666 ARAP2Q8WZ64 1704 aa23.19■■□□□ 1.3
CMTM3-210ENST00000565666 MFSD14BQ5SR56 506 aa23.18■■□□□ 1.3
CMTM3-210ENST00000565666 KRT26Q7Z3Y9 468 aa23.18■■□□□ 1.3
CMTM3-210ENST00000565666 DNAJC5GQ8N7S2 189 aa23.18■■□□□ 1.3
CMTM3-210ENST00000565666 ASTN2O75129 1339 aaPredicted RBP23.17■■□□□ 1.3
CMTM3-210ENST00000565666 TFCP2Q12800 502 aa23.17■■□□□ 1.3
CMTM3-210ENST00000565666 ANGEL2Q5VTE6 544 aaKnown RBP23.17■■□□□ 1.3
CMTM3-210ENST00000565666 SULF1Q8IWU6 871 aa23.17■■□□□ 1.3
CMTM3-210ENST00000565666 KLRG1Q96E93 195 aa23.17■■□□□ 1.3
CMTM3-210ENST00000565666 AKAP2Q9Y2D5 859 aa23.17■■□□□ 1.3
CMTM3-210ENST00000565666 POLR2AP24928 1970 aaKnown RBP23.17■■□□□ 1.3
CMTM3-210ENST00000565666 OS9Q13438 667 aaPredicted RBP23.16■■□□□ 1.3
CMTM3-210ENST00000565666 POLA2Q14181 598 aa23.16■■□□□ 1.3
CMTM3-210ENST00000565666 SSH3Q8TE77 659 aa23.16■■□□□ 1.3
CMTM3-210ENST00000565666 CHMP4BQ9H444 224 aaKnown RBP23.16■■□□□ 1.3
CMTM3-210ENST00000565666 ZNF408Q9H9D4 720 aa23.16■■□□□ 1.3
CMTM3-210ENST00000565666 NBPF9Q3BBW0 867 aa23.15■■□□□ 1.3
CMTM3-210ENST00000565666 GNL3LQ9NVN8 582 aaKnown RBP23.15■■□□□ 1.3
CMTM3-210ENST00000565666 ABT1Q9ULW3 272 aaKnown RBP23.15■■□□□ 1.3
CMTM3-210ENST00000565666 ADM5C9JUS6 153 aa23.14■■□□□ 1.29
CMTM3-210ENST00000565666 WNT10BO00744 389 aa23.14■■□□□ 1.29
CMTM3-210ENST00000565666 CELF2O95319 508 aaKnown RBP23.14■■□□□ 1.29
CMTM3-210ENST00000565666 PDE3AQ14432 1141 aa23.14■■□□□ 1.29
CMTM3-210ENST00000565666 DLGAP5Q15398 846 aa23.14■■□□□ 1.29
CMTM3-210ENST00000565666 TBC1D22AQ8WUA7 517 aa23.14■■□□□ 1.29
CMTM3-210ENST00000565666 MKRN1Q9UHC7 482 aaKnown RBP23.14■■□□□ 1.29
CMTM3-210ENST00000565666 A0A1B0GUL7 405 aa23.13■■□□□ 1.29
CMTM3-210ENST00000565666 SURF6O75683 361 aaKnown RBP23.13■■□□□ 1.29
CMTM3-210ENST00000565666 RBM5P52756 815 aaKnown RBP eCLIP23.13■■□□□ 1.29
CMTM3-210ENST00000565666 C20orf194Q5TEA3 1177 aa23.13■■□□□ 1.29
CMTM3-210ENST00000565666 CEP85Q6P2H3 762 aa23.13■■□□□ 1.29
CMTM3-210ENST00000565666 TTF2Q9UNY4 1162 aaKnown RBP23.13■■□□□ 1.29
CMTM3-210ENST00000565666 PITPNM2Q9BZ72 1349 aa23.12■■□□□ 1.29
CMTM3-210ENST00000565666 ADORA1P30542 326 aa23.12■■□□□ 1.29
CMTM3-210ENST00000565666 TIMM10P62072 90 aa23.12■■□□□ 1.29
CMTM3-210ENST00000565666 CST9Q5W186 159 aa23.12■■□□□ 1.29
CMTM3-210ENST00000565666 NEUROD6Q96NK8 337 aa23.12■■□□□ 1.29
CMTM3-210ENST00000565666 CFAP100Q494V2 611 aa23.11■■□□□ 1.29
CMTM3-210ENST00000565666 DLK2Q6UY11 383 aa23.11■■□□□ 1.29
CMTM3-210ENST00000565666 ECM29Q5VYK3 1845 aa23.1■■□□□ 1.29
CMTM3-210ENST00000565666 PHKA1P46020 1223 aa23.1■■□□□ 1.29
CMTM3-210ENST00000565666 XAGE2Q96GT9 111 aa23.1■■□□□ 1.29
CMTM3-210ENST00000565666 CNTNAP1P78357 1384 aa23.1■■□□□ 1.29
CMTM3-210ENST00000565666 MYO1BO43795 1136 aa23.09■■□□□ 1.29
CMTM3-210ENST00000565666 DEFB115Q30KQ5 88 aa23.09■■□□□ 1.29
CMTM3-210ENST00000565666 GORABQ5T7V8 394 aa23.09■■□□□ 1.29
CMTM3-210ENST00000565666 CCDC102BQ68D86 513 aa23.09■■□□□ 1.29
CMTM3-210ENST00000565666 MTMR14Q8NCE2 650 aa23.09■■□□□ 1.29
CMTM3-210ENST00000565666 WDR66Q8TBY9 1149 aa23.09■■□□□ 1.29
CMTM3-210ENST00000565666 ZBED3Q96IU2 234 aaPredicted RBP23.09■■□□□ 1.29
CMTM3-210ENST00000565666 ZBTB40Q9NUA8 1239 aa23.09■■□□□ 1.29
CMTM3-210ENST00000565666 SCAF8Q9UPN6 1271 aaKnown RBP23.09■■□□□ 1.29
CMTM3-210ENST00000565666 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.09■■□□□ 1.29
CMTM3-210ENST00000565666 SEMA3EO15041 775 aa23.08■■□□□ 1.29
CMTM3-210ENST00000565666 PAXIP1Q6ZW49 1069 aaPredicted RBP23.08■■□□□ 1.29
CMTM3-210ENST00000565666 APOBEC3FQ8IUX4 373 aaKnown RBP23.08■■□□□ 1.29
CMTM3-210ENST00000565666 CDCA5Q96FF9 252 aa23.08■■□□□ 1.29
CMTM3-210ENST00000565666 DENND2AQ9ULE3 1009 aa23.08■■□□□ 1.29
CMTM3-210ENST00000565666 PCDHAC2Q9Y5I4 1007 aa23.08■■□□□ 1.29
CMTM3-210ENST00000565666 COL1A1P02452 1464 aaPredicted RBP23.07■■□□□ 1.28
CMTM3-210ENST00000565666 SPDYE2BA6NHP3 402 aa23.07■■□□□ 1.28
CMTM3-210ENST00000565666 RASSF10A6NK89 507 aa23.07■■□□□ 1.28
CMTM3-210ENST00000565666 SPDYE6P0CI01 402 aa23.07■■□□□ 1.28
CMTM3-210ENST00000565666 GRIK5Q16478 980 aa23.07■■□□□ 1.28
CMTM3-210ENST00000565666 RPAP2Q8IXW5 612 aaPredicted RBP23.07■■□□□ 1.28
CMTM3-210ENST00000565666 SERPINA10Q9UK55 444 aa23.07■■□□□ 1.28
CMTM3-210ENST00000565666 NOP58Q9Y2X3 529 aaKnown RBP23.07■■□□□ 1.28
CMTM3-210ENST00000565666 TLL2Q9Y6L7 1015 aa23.07■■□□□ 1.28
CMTM3-210ENST00000565666 MAST3O60307 1309 aa23.07■■□□□ 1.28
CMTM3-210ENST00000565666 HMMRO75330 724 aa23.06■■□□□ 1.28
CMTM3-210ENST00000565666 SUGT1Q9Y2Z0 365 aa23.06■■□□□ 1.28
CMTM3-210ENST00000565666 CEP350Q5VT06 3117 aa23.06■■□□□ 1.28
CMTM3-210ENST00000565666 CLRN2A0PK11 232 aa23.05■■□□□ 1.28
CMTM3-210ENST00000565666 CRKP46108 304 aa23.05■■□□□ 1.28
CMTM3-210ENST00000565666 C2orf69Q8N8R5 385 aa23.05■■□□□ 1.28
CMTM3-210ENST00000565666 PRMT6Q96LA8 375 aaPredicted RBP23.05■■□□□ 1.28
CMTM3-210ENST00000565666 GBA2Q9HCG7 927 aaPredicted RBP23.05■■□□□ 1.28
CMTM3-210ENST00000565666 GPR108Q9NPR9 543 aa23.05■■□□□ 1.28
CMTM3-210ENST00000565666 EXOC6BQ9Y2D4 811 aa23.05■■□□□ 1.28
CMTM3-210ENST00000565666 RRP1P56182 461 aaKnown RBP23.04■■□□□ 1.28
CMTM3-210ENST00000565666 TNNI3KQ59H18 835 aa23.04■■□□□ 1.28
CMTM3-210ENST00000565666 SAPCD2Q86UD0 394 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms