RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 THSD7BQ9C0I4 1608 aa13.75□□□□□ -0.21
NSMCE1-210ENST00000565626 AOX1Q06278 1338 aa13.74□□□□□ -0.21
NSMCE1-210ENST00000565626 MROH5Q6ZUA9 1318 aa13.74□□□□□ -0.21
NSMCE1-210ENST00000565626 FAM155AB1AL88 458 aaPredicted RBP13.74□□□□□ -0.21
NSMCE1-210ENST00000565626 HIBADHP31937 336 aaKnown RBP13.74□□□□□ -0.21
NSMCE1-210ENST00000565626 RFX5P48382 616 aaPredicted RBP13.74□□□□□ -0.21
NSMCE1-210ENST00000565626 UBE4AQ14139 1066 aa13.74□□□□□ -0.21
NSMCE1-210ENST00000565626 METTL24Q5JXM2 366 aa13.74□□□□□ -0.21
NSMCE1-210ENST00000565626 RGMBQ6NW40 437 aa13.74□□□□□ -0.21
NSMCE1-210ENST00000565626 VGLL2Q8N8G2 317 aa13.74□□□□□ -0.21
NSMCE1-210ENST00000565626 PRDM10Q9NQV6 1147 aa13.74□□□□□ -0.21
NSMCE1-210ENST00000565626 HDAC9Q9UKV0 1011 aa13.74□□□□□ -0.21
NSMCE1-210ENST00000565626 IQSEC3Q9UPP2 1182 aaPredicted RBP13.74□□□□□ -0.21
NSMCE1-210ENST00000565626 ZNF157P51786 506 aaPredicted RBP13.73□□□□□ -0.21
NSMCE1-210ENST00000565626 BRPF1P55201 1214 aaPredicted RBP13.73□□□□□ -0.21
NSMCE1-210ENST00000565626 TDRD7Q8NHU6 1098 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-210ENST00000565626 API5Q9BZZ5 524 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-210ENST00000565626 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
NSMCE1-210ENST00000565626 UBE2Q2LH0YL09 131 aa13.72□□□□□ -0.21
NSMCE1-210ENST00000565626 BCAR3O75815 825 aa13.72□□□□□ -0.21
NSMCE1-210ENST00000565626 UBTFL1P0CB47 393 aaPredicted RBP13.72□□□□□ -0.21
NSMCE1-210ENST00000565626 PTPN12Q05209 780 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-210ENST00000565626 NOGQ13253 232 aa13.72□□□□□ -0.21
NSMCE1-210ENST00000565626 DLGAP5Q15398 846 aa13.72□□□□□ -0.21
NSMCE1-210ENST00000565626 CFAP100Q494V2 611 aa13.72□□□□□ -0.21
NSMCE1-210ENST00000565626 MEIS3Q99687 375 aa13.72□□□□□ -0.21
NSMCE1-210ENST00000565626 BEGAINQ9BUH8 593 aa13.72□□□□□ -0.21
NSMCE1-210ENST00000565626 FAM205AQ6ZU69 1335 aa13.71□□□□□ -0.21
NSMCE1-210ENST00000565626 CLRN2A0PK11 232 aa13.71□□□□□ -0.21
NSMCE1-210ENST00000565626 PDE8BO95263 885 aa13.71□□□□□ -0.21
NSMCE1-210ENST00000565626 HNRNPUQ00839 825 aaKnown RBP eCLIP13.71□□□□□ -0.21
NSMCE1-210ENST00000565626 KIF23Q02241 960 aaPredicted RBP13.71□□□□□ -0.21
NSMCE1-210ENST00000565626 GRIK5Q16478 980 aa13.71□□□□□ -0.21
NSMCE1-210ENST00000565626 MFSD14BQ5SR56 506 aa13.71□□□□□ -0.21
NSMCE1-210ENST00000565626 FBXO33Q7Z6M2 555 aa13.71□□□□□ -0.21
NSMCE1-210ENST00000565626 PRMT6Q96LA8 375 aaPredicted RBP13.71□□□□□ -0.21
NSMCE1-210ENST00000565626 LRRFIP2Q9Y608 721 aaKnown RBP13.71□□□□□ -0.21
NSMCE1-210ENST00000565626 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 EYA2O00167 538 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 SLC10A3P09131 477 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 MMP14P50281 582 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 BCAMP50895 628 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 FKBP1AP62942 108 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 CHAF1AQ13111 956 aaPredicted RBP13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 PRKG1Q13976 671 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 TTLL12Q14166 644 aaPredicted RBP13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 ATG9AQ7Z3C6 839 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 VPS37DQ86XT2 251 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 RASAL3Q86YV0 1011 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 MTMR14Q8NCE2 650 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 CCDC102AQ96A19 550 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 SIL1Q9H173 461 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 FZD1Q9UP38 647 aa13.7□□□□□ -0.22
NSMCE1-210ENST00000565626 FGFR2P21802 821 aa13.69□□□□□ -0.22
NSMCE1-210ENST00000565626 RBM5P52756 815 aaKnown RBP eCLIP13.69□□□□□ -0.22
NSMCE1-210ENST00000565626 APOBEC3FQ8IUX4 373 aaKnown RBP13.69□□□□□ -0.22
NSMCE1-210ENST00000565626 DEFB129Q9H1M3 183 aa13.69□□□□□ -0.22
NSMCE1-210ENST00000565626 TTF2Q9UNY4 1162 aaKnown RBP13.69□□□□□ -0.22
NSMCE1-210ENST00000565626 PA2G4Q9UQ80 394 aaKnown RBP13.69□□□□□ -0.22
NSMCE1-210ENST00000565626 KIF16BQ96L93 1317 aa13.68□□□□□ -0.22
NSMCE1-210ENST00000565626 TRIM27P14373 513 aa13.68□□□□□ -0.22
NSMCE1-210ENST00000565626 FKBP1BP68106 108 aa13.68□□□□□ -0.22
NSMCE1-210ENST00000565626 PUM3Q15397 648 aaKnown RBP13.68□□□□□ -0.22
NSMCE1-210ENST00000565626 INTS3Q68E01 1043 aaKnown RBP13.68□□□□□ -0.22
NSMCE1-210ENST00000565626 ARHGAP45Q92619 1136 aa13.68□□□□□ -0.22
NSMCE1-210ENST00000565626 FRAT1Q92837 279 aaPredicted RBP13.68□□□□□ -0.22
NSMCE1-210ENST00000565626 VEZTQ9HBM0 779 aa13.68□□□□□ -0.22
NSMCE1-210ENST00000565626 FRAT2O75474 233 aaPredicted RBP13.67□□□□□ -0.22
NSMCE1-210ENST00000565626 CAVIN4Q5BKX8 364 aa13.67□□□□□ -0.22
NSMCE1-210ENST00000565626 CLUAP1Q96AJ1 413 aa13.67□□□□□ -0.22
NSMCE1-210ENST00000565626 CSRNP1Q96S65 589 aa13.67□□□□□ -0.22
NSMCE1-210ENST00000565626 PAPPA2Q9BXP8 1791 aa13.67□□□□□ -0.22
NSMCE1-210ENST00000565626 CA12O43570 354 aa13.66□□□□□ -0.22
NSMCE1-210ENST00000565626 IFIT1P09914 478 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-210ENST00000565626 NF2P35240 595 aa13.66□□□□□ -0.22
NSMCE1-210ENST00000565626 MKRN3Q13064 507 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-210ENST00000565626 TDRD3Q9H7E2 651 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-210ENST00000565626 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.66□□□□□ -0.22
NSMCE1-210ENST00000565626 MYO1BO43795 1136 aa13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 TRPA1O75762 1119 aa13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 SLC5A1P13866 664 aa13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 CRKP46108 304 aa13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 RASA3Q14644 834 aa13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 NBPF12Q5TAG4 269 aaPredicted RBP13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 ATF7IPQ6VMQ6 1270 aa13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 DZIP1LQ8IYY4 767 aaKnown RBP13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 LPIN2Q92539 896 aa13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 RNF186Q9NXI6 227 aa13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 ZNF70Q9UC06 446 aaPredicted RBP13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 SERPINA10Q9UK55 444 aa13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 ANGEL1Q9UNK9 670 aaKnown RBP13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 SSC5DA1L4H1 1573 aa13.65□□□□□ -0.22
NSMCE1-210ENST00000565626 COL1A1P02452 1464 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-210ENST00000565626 IPO8O15397 1037 aaKnown RBP13.64□□□□□ -0.23
NSMCE1-210ENST00000565626 CIAO1O76071 339 aa13.64□□□□□ -0.23
NSMCE1-210ENST00000565626 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
NSMCE1-210ENST00000565626 ARMC9Q7Z3E5 817 aa13.64□□□□□ -0.23
NSMCE1-210ENST00000565626 COPRSQ9NQ92 184 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms