RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 EPHX2P34913 555 aa23.11■■□□□ 1.29
CSPG4P13-201ENST00000565545 KCNJ4P48050 445 aa23.11■■□□□ 1.29
CSPG4P13-201ENST00000565545 CCDC102BQ68D86 513 aa23.11■■□□□ 1.29
CSPG4P13-201ENST00000565545 CNTNAP1P78357 1384 aa23.11■■□□□ 1.29
CSPG4P13-201ENST00000565545 XDHP47989 1333 aa23.1■■□□□ 1.29
CSPG4P13-201ENST00000565545 SP8Q8IXZ3 490 aa23.1■■□□□ 1.29
CSPG4P13-201ENST00000565545 RUFY2Q8WXA3 655 aa23.1■■□□□ 1.29
CSPG4P13-201ENST00000565545 JDP2Q8WYK2 163 aa23.1■■□□□ 1.29
CSPG4P13-201ENST00000565545 AIDAQ96BJ3 306 aa23.1■■□□□ 1.29
CSPG4P13-201ENST00000565545 PAG1Q9NWQ8 432 aa23.1■■□□□ 1.29
CSPG4P13-201ENST00000565545 LRRC37AA6NMS7 1700 aa23.1■■□□□ 1.29
CSPG4P13-201ENST00000565545 AKAP11Q9UKA4 1901 aa23.1■■□□□ 1.29
CSPG4P13-201ENST00000565545 ZBTB22O15209 634 aa23.09■■□□□ 1.29
CSPG4P13-201ENST00000565545 ITGBL1O95965 494 aaPredicted RBP23.09■■□□□ 1.29
CSPG4P13-201ENST00000565545 MFAP1P55081 439 aaKnown RBP23.09■■□□□ 1.29
CSPG4P13-201ENST00000565545 PNMA8AQ86V59 439 aaPredicted RBP23.09■■□□□ 1.29
CSPG4P13-201ENST00000565545 DNAJC2Q99543 621 aaKnown RBP23.09■■□□□ 1.29
CSPG4P13-201ENST00000565545 FSD1Q9BTV5 496 aa23.09■■□□□ 1.29
CSPG4P13-201ENST00000565545 GNL3LQ9NVN8 582 aaKnown RBP23.09■■□□□ 1.29
CSPG4P13-201ENST00000565545 ZNF804BA4D1E1 1349 aa23.08■■□□□ 1.29
CSPG4P13-201ENST00000565545 PPEF1O14829 653 aaPredicted RBP23.08■■□□□ 1.29
CSPG4P13-201ENST00000565545 FOXN1O15353 648 aa23.08■■□□□ 1.29
CSPG4P13-201ENST00000565545 REC8O95072 547 aa23.08■■□□□ 1.29
CSPG4P13-201ENST00000565545 LRRFIP1Q32MZ4 808 aaKnown RBP23.08■■□□□ 1.29
CSPG4P13-201ENST00000565545 CAVIN4Q5BKX8 364 aa23.08■■□□□ 1.29
CSPG4P13-201ENST00000565545 KBTBD3Q8NAB2 608 aa23.08■■□□□ 1.29
CSPG4P13-201ENST00000565545 ESYT1Q9BSJ8 1104 aa23.08■■□□□ 1.29
CSPG4P13-201ENST00000565545 DIAPH3Q9NSV4 1193 aa23.08■■□□□ 1.29
CSPG4P13-201ENST00000565545 FZD9O00144 591 aa23.07■■□□□ 1.28
CSPG4P13-201ENST00000565545 EPB41L2O43491 1005 aaKnown RBP23.07■■□□□ 1.28
CSPG4P13-201ENST00000565545 ATP2B4P23634 1241 aa23.07■■□□□ 1.28
CSPG4P13-201ENST00000565545 PHKA1P46020 1223 aa23.07■■□□□ 1.28
CSPG4P13-201ENST00000565545 VEGFBP49765 207 aa23.07■■□□□ 1.28
CSPG4P13-201ENST00000565545 PODXL2Q9NZ53 605 aa23.07■■□□□ 1.28
CSPG4P13-201ENST00000565545 ANKIB1Q9P2G1 1089 aa23.07■■□□□ 1.28
CSPG4P13-201ENST00000565545 ATP6V0A2Q9Y487 856 aa23.07■■□□□ 1.28
CSPG4P13-201ENST00000565545 CACNA1SQ13698 1873 aa23.07■■□□□ 1.28
CSPG4P13-201ENST00000565545 SNAP23O00161 211 aa23.06■■□□□ 1.28
CSPG4P13-201ENST00000565545 TTF1Q15361 905 aaPredicted RBP23.06■■□□□ 1.28
CSPG4P13-201ENST00000565545 MAP1SQ66K74 1059 aaPredicted RBP23.06■■□□□ 1.28
CSPG4P13-201ENST00000565545 CC2D2BQ6DHV5 1058 aa23.06■■□□□ 1.28
CSPG4P13-201ENST00000565545 C15orf52Q6ZUT6 534 aaKnown RBP23.06■■□□□ 1.28
CSPG4P13-201ENST00000565545 GPC2Q8N158 579 aa23.06■■□□□ 1.28
CSPG4P13-201ENST00000565545 TMX4Q9H1E5 349 aaPredicted RBP23.06■■□□□ 1.28
CSPG4P13-201ENST00000565545 GJA3Q9Y6H8 435 aa23.06■■□□□ 1.28
CSPG4P13-201ENST00000565545 GOLIM4O00461 696 aa23.05■■□□□ 1.28
CSPG4P13-201ENST00000565545 MCAMP43121 646 aa23.05■■□□□ 1.28
CSPG4P13-201ENST00000565545 EIF6P56537 245 aaKnown RBP23.05■■□□□ 1.28
CSPG4P13-201ENST00000565545 FBXO33Q7Z6M2 555 aa23.05■■□□□ 1.28
CSPG4P13-201ENST00000565545 PSMD1Q99460 953 aa23.05■■□□□ 1.28
CSPG4P13-201ENST00000565545 RAD50Q92878 1312 aa23.05■■□□□ 1.28
CSPG4P13-201ENST00000565545 SEMA3EO15041 775 aa23.04■■□□□ 1.28
CSPG4P13-201ENST00000565545 CTCFP49711 727 aaPredicted RBP23.04■■□□□ 1.28
CSPG4P13-201ENST00000565545 BCAMP50895 628 aa23.04■■□□□ 1.28
CSPG4P13-201ENST00000565545 TBC1D32Q96NH3 1257 aa23.04■■□□□ 1.28
CSPG4P13-201ENST00000565545 SGSM2O43147 1006 aa23.03■■□□□ 1.28
CSPG4P13-201ENST00000565545 LMOD1P29536 600 aaPredicted RBP23.03■■□□□ 1.28
CSPG4P13-201ENST00000565545 GPSM2P81274 684 aa23.03■■□□□ 1.28
CSPG4P13-201ENST00000565545 SCARF1Q14162 830 aa23.03■■□□□ 1.28
CSPG4P13-201ENST00000565545 VPS37DQ86XT2 251 aa23.03■■□□□ 1.28
CSPG4P13-201ENST00000565545 SPATA5Q8NB90 893 aa23.03■■□□□ 1.28
CSPG4P13-201ENST00000565545 EDC3Q96F86 508 aaKnown RBP23.03■■□□□ 1.28
CSPG4P13-201ENST00000565545 FAM84BQ96KN1 310 aaPredicted RBP23.03■■□□□ 1.28
CSPG4P13-201ENST00000565545 C22orf23Q9BZE7 217 aa23.03■■□□□ 1.28
CSPG4P13-201ENST00000565545 PRDM10Q9NQV6 1147 aa23.03■■□□□ 1.28
CSPG4P13-201ENST00000565545 GGA1Q9UJY5 639 aa23.03■■□□□ 1.28
CSPG4P13-201ENST00000565545 SCN4AP35499 1836 aa23.03■■□□□ 1.28
CSPG4P13-201ENST00000565545 ZFYP08048 801 aaPredicted RBP23.02■■□□□ 1.28
CSPG4P13-201ENST00000565545 ZAP70P43403 619 aa23.02■■□□□ 1.28
CSPG4P13-201ENST00000565545 DEFB115Q30KQ5 88 aa23.02■■□□□ 1.28
CSPG4P13-201ENST00000565545 HMG20BQ9P0W2 317 aa23.02■■□□□ 1.28
CSPG4P13-201ENST00000565545 ABT1Q9ULW3 272 aaKnown RBP23.02■■□□□ 1.28
CSPG4P13-201ENST00000565545 NSFL1CQ9UNZ2 370 aaKnown RBP23.02■■□□□ 1.28
CSPG4P13-201ENST00000565545 NDUFB9Q9Y6M9 179 aa23.02■■□□□ 1.28
CSPG4P13-201ENST00000565545 PDS5AQ29RF7 1337 aaKnown RBP23.02■■□□□ 1.28
CSPG4P13-201ENST00000565545 LTBP1Q14766 1721 aa23.02■■□□□ 1.28
CSPG4P13-201ENST00000565545 MYH7P12883 1935 aa23.02■■□□□ 1.28
CSPG4P13-201ENST00000565545 HIBADHP31937 336 aaKnown RBP23.01■■□□□ 1.27
CSPG4P13-201ENST00000565545 ZSCAN25Q6NSZ9 544 aa23.01■■□□□ 1.27
CSPG4P13-201ENST00000565545 CWC27Q6UX04 472 aaKnown RBP23.01■■□□□ 1.27
CSPG4P13-201ENST00000565545 LARGE2Q8N3Y3 721 aa23.01■■□□□ 1.27
CSPG4P13-201ENST00000565545 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.01■■□□□ 1.27
CSPG4P13-201ENST00000565545 SNRKQ9NRH2 765 aa23.01■■□□□ 1.27
CSPG4P13-201ENST00000565545 DENND2AQ9ULE3 1009 aa23.01■■□□□ 1.27
CSPG4P13-201ENST00000565545 IRS2Q9Y4H2 1338 aa23.01■■□□□ 1.27
CSPG4P13-201ENST00000565545 ANP32AP39687 249 aaKnown RBP23■■□□□ 1.27
CSPG4P13-201ENST00000565545 GYG1P46976 350 aa23■■□□□ 1.27
CSPG4P13-201ENST00000565545 RBM25P49756 843 aaKnown RBP23■■□□□ 1.27
CSPG4P13-201ENST00000565545 RASGRF1Q13972 1273 aa23■■□□□ 1.27
CSPG4P13-201ENST00000565545 GRIPAP1Q4V328 841 aa23■■□□□ 1.27
CSPG4P13-201ENST00000565545 USP26Q9BXU7 913 aa23■■□□□ 1.27
CSPG4P13-201ENST00000565545 MYH13Q9UKX3 1938 aa23■■□□□ 1.27
CSPG4P13-201ENST00000565545 RNF113AO15541 343 aaKnown RBP22.99■■□□□ 1.27
CSPG4P13-201ENST00000565545 UFL1O94874 794 aa22.99■■□□□ 1.27
CSPG4P13-201ENST00000565545 NMIQ13287 307 aaPredicted RBP22.99■■□□□ 1.27
CSPG4P13-201ENST00000565545 KIAA1211Q6ZU35 1233 aa22.99■■□□□ 1.27
CSPG4P13-201ENST00000565545 ANTXR1Q9H6X2 564 aa22.99■■□□□ 1.27
CSPG4P13-201ENST00000565545 WBP1LQ9NX94 342 aa22.99■■□□□ 1.27
CSPG4P13-201ENST00000565545 WTIPA6NIX2 430 aaPredicted RBP22.98■■□□□ 1.27
CSPG4P13-201ENST00000565545 RASSF10A6NK89 507 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms