RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 CPSF6Q16630 551 aaKnown RBP eCLIP8.14□□□□□ -1.11
CHD9-215ENST00000565442 FBXL6Q8N531 539 aa8.14□□□□□ -1.11
CHD9-215ENST00000565442 ASIC4Q96FT7 647 aa8.14□□□□□ -1.11
CHD9-215ENST00000565442 FBXL18Q96ME1 805 aa8.14□□□□□ -1.11
CHD9-215ENST00000565442 OSBPL1AQ9BXW6 950 aa8.14□□□□□ -1.11
CHD9-215ENST00000565442 TNFRSF10BO14763 440 aa8.13□□□□□ -1.11
CHD9-215ENST00000565442 PRNPP04156 253 aa8.13□□□□□ -1.11
CHD9-215ENST00000565442 ZAP70P43403 619 aa8.13□□□□□ -1.11
CHD9-215ENST00000565442 SGO2Q562F6 1265 aa8.13□□□□□ -1.11
CHD9-215ENST00000565442 VSIG10LQ86VR7 867 aa8.13□□□□□ -1.11
CHD9-215ENST00000565442 MEGF11A6BM72 1044 aa8.12□□□□□ -1.11
CHD9-215ENST00000565442 SWI5Q1ZZU3 235 aa8.12□□□□□ -1.11
CHD9-215ENST00000565442 NFXL1Q6ZNB6 911 aa8.12□□□□□ -1.11
CHD9-215ENST00000565442 ZBTB7CA1YPR0 619 aa8.11□□□□□ -1.11
CHD9-215ENST00000565442 PRMT3O60678 531 aa8.11□□□□□ -1.11
CHD9-215ENST00000565442 ITGB5P18084 799 aa8.11□□□□□ -1.11
CHD9-215ENST00000565442 RXRBP28702 533 aa8.11□□□□□ -1.11
CHD9-215ENST00000565442 FAM69CQ0P6D2 419 aa8.11□□□□□ -1.11
CHD9-215ENST00000565442 OCLNQ16625 522 aa8.11□□□□□ -1.11
CHD9-215ENST00000565442 TP53INP2Q8IXH6 220 aa8.11□□□□□ -1.11
CHD9-215ENST00000565442 GPR152Q8TDT2 470 aa8.11□□□□□ -1.11
CHD9-215ENST00000565442 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
CHD9-215ENST00000565442 JUNBP17275 347 aaPredicted RBP8.1□□□□□ -1.11
CHD9-215ENST00000565442 KANSL3Q9P2N6 904 aa8.1□□□□□ -1.11
CHD9-215ENST00000565442 BRD1O95696 1058 aa8.09□□□□□ -1.11
CHD9-215ENST00000565442 METTL22Q9BUU2 404 aaPredicted RBP8.09□□□□□ -1.11
CHD9-215ENST00000565442 SLAIN2Q9P270 581 aa8.09□□□□□ -1.11
CHD9-215ENST00000565442 ARL4DP49703 201 aa8.08□□□□□ -1.12
CHD9-215ENST00000565442 NUTM2GQ5VZR2 741 aa8.08□□□□□ -1.12
CHD9-215ENST00000565442 ELP3Q9H9T3 547 aa8.08□□□□□ -1.12
CHD9-215ENST00000565442 ACPPP15309 386 aa8.07□□□□□ -1.12
CHD9-215ENST00000565442 C19orf57Q0VDD7 668 aa8.07□□□□□ -1.12
CHD9-215ENST00000565442 COL19A1Q14993 1142 aa8.07□□□□□ -1.12
CHD9-215ENST00000565442 PDE12Q6L8Q7 609 aaKnown RBP8.07□□□□□ -1.12
CHD9-215ENST00000565442 SHISA5Q8N114 240 aa8.07□□□□□ -1.12
CHD9-215ENST00000565442 C12orf50Q8NA57 414 aaPredicted RBP8.07□□□□□ -1.12
CHD9-215ENST00000565442 MKNK1Q9BUB5 465 aa8.07□□□□□ -1.12
CHD9-215ENST00000565442 TMPRSS13Q9BYE2 586 aa8.07□□□□□ -1.12
CHD9-215ENST00000565442 BSDC1Q9NW68 430 aaPredicted RBP8.07□□□□□ -1.12
CHD9-215ENST00000565442 TMEM63CQ9P1W3 806 aa8.07□□□□□ -1.12
CHD9-215ENST00000565442 FAM95CA0A1B0GW59 222 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 NFKBIEO00221 500 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 CYP26A1O43174 497 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 TIAF1O95411 115 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 NFKBIBQ15653 356 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 HGSNATQ68CP4 663 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 PAOXQ6QHF9 649 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 CAPN12Q6ZSI9 719 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 SMG8Q8ND04 991 aaKnown RBP8.06□□□□□ -1.12
CHD9-215ENST00000565442 CLP1Q92989 425 aaKnown RBP8.06□□□□□ -1.12
CHD9-215ENST00000565442 SUGCTQ9HAC7 445 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 CYP4F12Q9HCS2 524 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 PODXL2Q9NZ53 605 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 SALL4Q9UJQ4 1053 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 SOX13Q9UN79 622 aa8.06□□□□□ -1.12
CHD9-215ENST00000565442 PDE2AO00408 941 aaPredicted RBP8.05□□□□□ -1.12
CHD9-215ENST00000565442 NAA30Q147X3 362 aaPredicted RBP8.05□□□□□ -1.12
CHD9-215ENST00000565442 AGBL5Q8NDL9 886 aa8.05□□□□□ -1.12
CHD9-215ENST00000565442 DZANK1Q9NVP4 752 aa8.05□□□□□ -1.12
CHD9-215ENST00000565442 CNTN3Q9P232 1028 aa8.05□□□□□ -1.12
CHD9-215ENST00000565442 STIM2Q9P246 746 aa8.05□□□□□ -1.12
CHD9-215ENST00000565442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.05□□□□□ -1.12
CHD9-215ENST00000565442 ZBTB39O15060 712 aa8.04□□□□□ -1.12
CHD9-215ENST00000565442 ATP2B4P23634 1241 aa8.04□□□□□ -1.12
CHD9-215ENST00000565442 B4GALNT3Q6L9W6 998 aa8.04□□□□□ -1.12
CHD9-215ENST00000565442 PHLDB3Q6NSJ2 640 aa8.04□□□□□ -1.12
CHD9-215ENST00000565442 ZNF438Q7Z4V0 828 aa8.04□□□□□ -1.12
CHD9-215ENST00000565442 ABTB2Q8N961 1025 aa8.04□□□□□ -1.12
CHD9-215ENST00000565442 FLCNQ8NFG4 579 aa8.04□□□□□ -1.12
CHD9-215ENST00000565442 KRTAP4-2Q9BYR5 136 aa8.04□□□□□ -1.12
CHD9-215ENST00000565442 SSFA2P28290 1259 aa8.03□□□□□ -1.12
CHD9-215ENST00000565442 USP11P51784 963 aa8.03□□□□□ -1.12
CHD9-215ENST00000565442 KCNA1Q09470 495 aa8.03□□□□□ -1.12
CHD9-215ENST00000565442 LCE4AQ5TA78 99 aa8.03□□□□□ -1.12
CHD9-215ENST00000565442 ZAR1Q86SH2 424 aa8.03□□□□□ -1.12
CHD9-215ENST00000565442 FBLIM1Q8WUP2 373 aa8.03□□□□□ -1.12
CHD9-215ENST00000565442 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
CHD9-215ENST00000565442 TBC1D32Q96NH3 1257 aa8.03□□□□□ -1.12
CHD9-215ENST00000565442 HHIPQ96QV1 700 aa8.03□□□□□ -1.12
CHD9-215ENST00000565442 USP26Q9BXU7 913 aa8.03□□□□□ -1.12
CHD9-215ENST00000565442 CXXC1Q9P0U4 656 aaPredicted RBP8.03□□□□□ -1.12
CHD9-215ENST00000565442 LOC100289279A0A1B0GTE1 492 aa8.02□□□□□ -1.13
CHD9-215ENST00000565442 TRPA1O75762 1119 aa8.02□□□□□ -1.13
CHD9-215ENST00000565442 CES1P23141 567 aa8.02□□□□□ -1.13
CHD9-215ENST00000565442 ADMP35318 185 aa8.02□□□□□ -1.13
CHD9-215ENST00000565442 CDPF1Q6NVV7 123 aa8.02□□□□□ -1.13
CHD9-215ENST00000565442 PAK6Q9NQU5 681 aaPredicted RBP8.02□□□□□ -1.13
CHD9-215ENST00000565442 SOX1O00570 391 aaPredicted RBP8.01□□□□□ -1.13
CHD9-215ENST00000565442 IKBKEQ14164 716 aa8.01□□□□□ -1.13
CHD9-215ENST00000565442 C1orf127Q8N9H9 656 aa8.01□□□□□ -1.13
CHD9-215ENST00000565442 TMEM102Q8N9M5 508 aaPredicted RBP8.01□□□□□ -1.13
CHD9-215ENST00000565442 PRKAG2Q9UGJ0 569 aa8.01□□□□□ -1.13
CHD9-215ENST00000565442 IVNS1ABPQ9Y6Y0 642 aa8.01□□□□□ -1.13
CHD9-215ENST00000565442 DRD2P14416 443 aa8□□□□□ -1.13
CHD9-215ENST00000565442 C2CD4AQ8NCU7 369 aaPredicted RBP8□□□□□ -1.13
CHD9-215ENST00000565442 EZH1Q92800 747 aaPredicted RBP8□□□□□ -1.13
CHD9-215ENST00000565442 YIPF2Q9BWQ6 316 aa8□□□□□ -1.13
CHD9-215ENST00000565442 GZF1Q9H116 711 aaPredicted RBP8□□□□□ -1.13
CHD9-215ENST00000565442 FAM170BA6NMN3 283 aa7.99□□□□□ -1.13
CHD9-215ENST00000565442 PATL2C9JE40 543 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms