RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 NOB1Q9ULX3 412 aaKnown RBP18.56■□□□□ 0.56
USB1-210ENST00000565151 MYO3BQ8WXR4 1341 aa18.55■□□□□ 0.56
USB1-210ENST00000565151 GYG1P46976 350 aa18.55■□□□□ 0.56
USB1-210ENST00000565151 RFX5P48382 616 aaPredicted RBP18.55■□□□□ 0.56
USB1-210ENST00000565151 AIDAQ96BJ3 306 aa18.55■□□□□ 0.56
USB1-210ENST00000565151 FAM84BQ96KN1 310 aaPredicted RBP18.55■□□□□ 0.56
USB1-210ENST00000565151 RGMBQ6NW40 437 aa18.54■□□□□ 0.56
USB1-210ENST00000565151 RARSP54136 660 aaKnown RBP18.53■□□□□ 0.56
USB1-210ENST00000565151 BRPF1P55201 1214 aaPredicted RBP18.53■□□□□ 0.56
USB1-210ENST00000565151 UBE4AQ14139 1066 aa18.53■□□□□ 0.56
USB1-210ENST00000565151 GRIK5Q16478 980 aa18.53■□□□□ 0.56
USB1-210ENST00000565151 C2orf69Q8N8R5 385 aa18.53■□□□□ 0.56
USB1-210ENST00000565151 TDRD7Q8NHU6 1098 aaKnown RBP18.53■□□□□ 0.56
USB1-210ENST00000565151 TNNQ9UQP3 1299 aa18.53■□□□□ 0.56
USB1-210ENST00000565151 FAM205AQ6ZU69 1335 aa18.52■□□□□ 0.56
USB1-210ENST00000565151 ZNF804AQ7Z570 1209 aa18.52■□□□□ 0.56
USB1-210ENST00000565151 OGFOD1Q8N543 542 aa18.52■□□□□ 0.56
USB1-210ENST00000565151 F8W031 263 aaPredicted RBP18.51■□□□□ 0.55
USB1-210ENST00000565151 CAPN15O75808 1086 aa18.51■□□□□ 0.55
USB1-210ENST00000565151 PRMT6Q96LA8 375 aaPredicted RBP18.51■□□□□ 0.55
USB1-210ENST00000565151 UBE2Q2LH0YL09 131 aa18.5■□□□□ 0.55
USB1-210ENST00000565151 SLC10A3P09131 477 aa18.5■□□□□ 0.55
USB1-210ENST00000565151 CT47B1P0C2W7 299 aaPredicted RBP18.5■□□□□ 0.55
USB1-210ENST00000565151 ZNF157P51786 506 aaPredicted RBP18.5■□□□□ 0.55
USB1-210ENST00000565151 PTPN12Q05209 780 aaKnown RBP18.5■□□□□ 0.55
USB1-210ENST00000565151 FBXO33Q7Z6M2 555 aa18.5■□□□□ 0.55
USB1-210ENST00000565151 MTMR14Q8NCE2 650 aa18.5■□□□□ 0.55
USB1-210ENST00000565151 SSC5DA1L4H1 1573 aa18.5■□□□□ 0.55
USB1-210ENST00000565151 LAMB1P07942 1786 aa18.5■□□□□ 0.55
USB1-210ENST00000565151 OTOFQ9HC10 1997 aa18.5■□□□□ 0.55
USB1-210ENST00000565151 MROH5Q6ZUA9 1318 aa18.49■□□□□ 0.55
USB1-210ENST00000565151 FGFR2P21802 821 aa18.49■□□□□ 0.55
USB1-210ENST00000565151 HIBADHP31937 336 aaKnown RBP18.49■□□□□ 0.55
USB1-210ENST00000565151 FKBP1AP62942 108 aaKnown RBP18.49■□□□□ 0.55
USB1-210ENST00000565151 KIF23Q02241 960 aaPredicted RBP18.49■□□□□ 0.55
USB1-210ENST00000565151 NOGQ13253 232 aa18.49■□□□□ 0.55
USB1-210ENST00000565151 ATG9AQ7Z3C6 839 aa18.49■□□□□ 0.55
USB1-210ENST00000565151 RASAL3Q86YV0 1011 aa18.49■□□□□ 0.55
USB1-210ENST00000565151 FZD1Q9UP38 647 aa18.49■□□□□ 0.55
USB1-210ENST00000565151 IQSEC3Q9UPP2 1182 aaPredicted RBP18.49■□□□□ 0.55
USB1-210ENST00000565151 PDE8BO95263 885 aa18.48■□□□□ 0.55
USB1-210ENST00000565151 CFAP100Q494V2 611 aa18.48■□□□□ 0.55
USB1-210ENST00000565151 METTL24Q5JXM2 366 aa18.48■□□□□ 0.55
USB1-210ENST00000565151 MEIS3Q99687 375 aa18.48■□□□□ 0.55
USB1-210ENST00000565151 BCAR3O75815 825 aa18.47■□□□□ 0.55
USB1-210ENST00000565151 MMP14P50281 582 aa18.47■□□□□ 0.55
USB1-210ENST00000565151 DLGAP5Q15398 846 aa18.47■□□□□ 0.55
USB1-210ENST00000565151 CSRNP1Q96S65 589 aa18.47■□□□□ 0.55
USB1-210ENST00000565151 HDAC9Q9UKV0 1011 aa18.47■□□□□ 0.55
USB1-210ENST00000565151 COL1A1P02452 1464 aaPredicted RBP18.46■□□□□ 0.55
USB1-210ENST00000565151 CLRN2A0PK11 232 aa18.46■□□□□ 0.55
USB1-210ENST00000565151 SPDYE2BA6NHP3 402 aa18.46■□□□□ 0.55
USB1-210ENST00000565151 SPDYE6P0CI01 402 aa18.46■□□□□ 0.55
USB1-210ENST00000565151 BCAMP50895 628 aa18.46■□□□□ 0.55
USB1-210ENST00000565151 CCDC102AQ96A19 550 aa18.46■□□□□ 0.55
USB1-210ENST00000565151 EYA2O00167 538 aa18.45■□□□□ 0.54
USB1-210ENST00000565151 FKBP1BP68106 108 aa18.45■□□□□ 0.54
USB1-210ENST00000565151 MFSD14BQ5SR56 506 aa18.45■□□□□ 0.54
USB1-210ENST00000565151 DIEXFQ68CQ4 756 aaKnown RBP18.45■□□□□ 0.54
USB1-210ENST00000565151 APOBEC3FQ8IUX4 373 aaKnown RBP18.45■□□□□ 0.54
USB1-210ENST00000565151 API5Q9BZZ5 524 aaKnown RBP18.45■□□□□ 0.54
USB1-210ENST00000565151 DEFB129Q9H1M3 183 aa18.45■□□□□ 0.54
USB1-210ENST00000565151 LRRFIP2Q9Y608 721 aaKnown RBP18.45■□□□□ 0.54
USB1-210ENST00000565151 UBTFL1P0CB47 393 aaPredicted RBP18.44■□□□□ 0.54
USB1-210ENST00000565151 PRKG1Q13976 671 aa18.44■□□□□ 0.54
USB1-210ENST00000565151 INTS3Q68E01 1043 aaKnown RBP18.44■□□□□ 0.54
USB1-210ENST00000565151 PA2G4Q9UQ80 394 aaKnown RBP18.44■□□□□ 0.54
USB1-210ENST00000565151 CDAN1Q8IWY9 1227 aa18.43■□□□□ 0.54
USB1-210ENST00000565151 ARHGAP45Q92619 1136 aa18.43■□□□□ 0.54
USB1-210ENST00000565151 BEGAINQ9BUH8 593 aa18.43■□□□□ 0.54
USB1-210ENST00000565151 SIL1Q9H173 461 aa18.43■□□□□ 0.54
USB1-210ENST00000565151 TTF2Q9UNY4 1162 aaKnown RBP18.43■□□□□ 0.54
USB1-210ENST00000565151 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.43■□□□□ 0.54
USB1-210ENST00000565151 TRIM27P14373 513 aa18.42■□□□□ 0.54
USB1-210ENST00000565151 CHAF1AQ13111 956 aaPredicted RBP18.42■□□□□ 0.54
USB1-210ENST00000565151 LDLRAD1Q5T700 205 aa18.42■□□□□ 0.54
USB1-210ENST00000565151 RNF186Q9NXI6 227 aa18.42■□□□□ 0.54
USB1-210ENST00000565151 PUM3Q15397 648 aaKnown RBP18.41■□□□□ 0.54
USB1-210ENST00000565151 NBPF12Q5TAG4 269 aaPredicted RBP18.41■□□□□ 0.54
USB1-210ENST00000565151 TDRD3Q9H7E2 651 aaKnown RBP18.41■□□□□ 0.54
USB1-210ENST00000565151 MYH2Q9UKX2 1941 aa18.41■□□□□ 0.54
USB1-210ENST00000565151 CA12O43570 354 aa18.4■□□□□ 0.54
USB1-210ENST00000565151 TRPA1O75762 1119 aa18.4■□□□□ 0.54
USB1-210ENST00000565151 CRKP46108 304 aa18.4■□□□□ 0.54
USB1-210ENST00000565151 SPDYE2Q495Y8 402 aa18.4■□□□□ 0.54
USB1-210ENST00000565151 ZNF70Q9UC06 446 aaPredicted RBP18.4■□□□□ 0.54
USB1-210ENST00000565151 SERPINA10Q9UK55 444 aa18.4■□□□□ 0.54
USB1-210ENST00000565151 KIF16BQ96L93 1317 aa18.4■□□□□ 0.54
USB1-210ENST00000565151 CIAO1O76071 339 aa18.39■□□□□ 0.53
USB1-210ENST00000565151 HNRNPUQ00839 825 aaKnown RBP eCLIP18.39■□□□□ 0.53
USB1-210ENST00000565151 MKRN3Q13064 507 aaKnown RBP18.39■□□□□ 0.53
USB1-210ENST00000565151 TTLL12Q14166 644 aaPredicted RBP18.39■□□□□ 0.53
USB1-210ENST00000565151 RASA3Q14644 834 aa18.39■□□□□ 0.53
USB1-210ENST00000565151 DZIP1LQ8IYY4 767 aaKnown RBP18.39■□□□□ 0.53
USB1-210ENST00000565151 CLMNQ96JQ2 1002 aa18.39■□□□□ 0.53
USB1-210ENST00000565151 TEPSINQ96N21 525 aa18.39■□□□□ 0.53
USB1-210ENST00000565151 VEZTQ9HBM0 779 aa18.39■□□□□ 0.53
USB1-210ENST00000565151 COPRSQ9NQ92 184 aa18.39■□□□□ 0.53
USB1-210ENST00000565151 ANGEL1Q9UNK9 670 aaKnown RBP18.39■□□□□ 0.53
USB1-210ENST00000565151 RBM5P52756 815 aaKnown RBP eCLIP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms