RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 LSG1Q9H089 658 aaKnown RBP15.24■□□□□ 0.03
NSMCE1-208ENST00000565070 LTBP3Q9NS15 1303 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 SNAP23O00161 211 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 HIP1O00291 1037 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 ADORA1P30542 326 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 WASHC4Q2M389 1173 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 TTC39AQ5SRH9 613 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 CWC27Q6UX04 472 aaKnown RBP15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 SLC51AQ86UW1 340 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 ZNF512BQ96KM6 892 aaPredicted RBP15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 TAOK3Q9H2K8 898 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 DIAPH3Q9NSV4 1193 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 WWC3Q9ULE0 1092 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 ZBTB22O15209 634 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 HIBADHP31937 336 aaKnown RBP15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 CCDC102BQ68D86 513 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 SNRKQ9NRH2 765 aa15.23■□□□□ 0.03
NSMCE1-208ENST00000565070 IRS2Q9Y4H2 1338 aa15.22■□□□□ 0.03
NSMCE1-208ENST00000565070 MYH13Q9UKX3 1938 aa15.22■□□□□ 0.03
NSMCE1-208ENST00000565070 SEMA3EO15041 775 aa15.22■□□□□ 0.03
NSMCE1-208ENST00000565070 FBXO33Q7Z6M2 555 aa15.22■□□□□ 0.03
NSMCE1-208ENST00000565070 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.22■□□□□ 0.03
NSMCE1-208ENST00000565070 FAM84BQ96KN1 310 aaPredicted RBP15.22■□□□□ 0.03
NSMCE1-208ENST00000565070 BOLA2Q9H3K6 86 aa15.22■□□□□ 0.03
NSMCE1-208ENST00000565070 G3V3G9 751 aa15.21■□□□□ 0.03
NSMCE1-208ENST00000565070 HSP90AA1P07900 732 aaKnown RBP15.21■□□□□ 0.03
NSMCE1-208ENST00000565070 ARID4AP29374 1257 aaPredicted RBP15.21■□□□□ 0.03
NSMCE1-208ENST00000565070 GYG1P46976 350 aa15.21■□□□□ 0.03
NSMCE1-208ENST00000565070 DCAF8Q5TAQ9 597 aa15.21■□□□□ 0.03
NSMCE1-208ENST00000565070 COA1Q9GZY4 146 aa15.21■□□□□ 0.03
NSMCE1-208ENST00000565070 PHKA1P46020 1223 aa15.2■□□□□ 0.02
NSMCE1-208ENST00000565070 MCM2P49736 904 aa15.2■□□□□ 0.02
NSMCE1-208ENST00000565070 BCAMP50895 628 aa15.2■□□□□ 0.02
NSMCE1-208ENST00000565070 KIAA2012Q0VF49 1180 aa15.2■□□□□ 0.02
NSMCE1-208ENST00000565070 KIAA1211Q6ZU35 1233 aa15.2■□□□□ 0.02
NSMCE1-208ENST00000565070 RFX7Q2KHR2 1363 aa15.2■□□□□ 0.02
NSMCE1-208ENST00000565070 WTIPA6NIX2 430 aaPredicted RBP15.2■□□□□ 0.02
NSMCE1-208ENST00000565070 KLRK1P26718 216 aa15.2■□□□□ 0.02
NSMCE1-208ENST00000565070 NEK4P51957 841 aa15.2■□□□□ 0.02
NSMCE1-208ENST00000565070 EDC3Q96F86 508 aaKnown RBP15.2■□□□□ 0.02
NSMCE1-208ENST00000565070 NDUFB9Q9Y6M9 179 aa15.2■□□□□ 0.02
NSMCE1-208ENST00000565070 PPIP5K2O43314 1243 aa15.19■□□□□ 0.02
NSMCE1-208ENST00000565070 TXNRD3Q86VQ6 643 aa15.19■□□□□ 0.02
NSMCE1-208ENST00000565070 DENND2AQ9ULE3 1009 aa15.19■□□□□ 0.02
NSMCE1-208ENST00000565070 PDS5AQ29RF7 1337 aaKnown RBP15.19■□□□□ 0.02
NSMCE1-208ENST00000565070 RIMBP2O15034 1052 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 IARSP41252 1262 aaKnown RBP15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 RAB3GAP1Q15042 981 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 GPR101Q96P66 508 aaPredicted RBP15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 HAUS7Q99871 368 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 FSD1Q9BTV5 496 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 CD209Q9NNX6 404 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 CHD4Q14839 1912 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 AKAP11Q9UKA4 1901 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 NFKBIEO00221 500 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 GRIN3BO60391 1043 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 IL1R1P14778 569 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 NMIQ13287 307 aaPredicted RBP15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 GPR162Q16538 588 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 AOC3Q16853 763 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 ARHGAP27Q6ZUM4 889 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 PODNQ7Z5L7 613 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 LARGE2Q8N3Y3 721 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 TDRD7Q8NHU6 1098 aaKnown RBP15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 KCNB2Q92953 911 aa15.18■□□□□ 0.02
NSMCE1-208ENST00000565070 TICAM2Q86XR7 235 aa15.17■□□□□ 0.02
NSMCE1-208ENST00000565070 FAM227BQ96M60 508 aa15.17■□□□□ 0.02
NSMCE1-208ENST00000565070 ZNF277Q9NRM2 450 aaPredicted RBP15.17■□□□□ 0.02
NSMCE1-208ENST00000565070 SNX14Q9Y5W7 946 aa15.17■□□□□ 0.02
NSMCE1-208ENST00000565070 YBX3P16989 372 aaKnown RBP eCLIP15.16■□□□□ 0.021e-10■□□□□ 10
NSMCE1-208ENST00000565070 MCM4P33991 863 aa15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 PTH1RQ03431 593 aa15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 RASGRF1Q13972 1273 aa15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 SCARF1Q14162 830 aa15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 TTF1Q15361 905 aaPredicted RBP15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 SPATA5Q8NB90 893 aa15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 FOXD4L1Q9NU39 408 aa15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 CCDC171Q6TFL3 1326 aa15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 CCDC88AQ3V6T2 1871 aa15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 MCAMP43121 646 aa15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 NIM1KQ8IY84 436 aa15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 JDP2Q8WYK2 163 aa15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 CWC22Q9HCG8 908 aaKnown RBP15.16■□□□□ 0.02
NSMCE1-208ENST00000565070 DICER1Q9UPY3 1922 aaKnown RBP15.15■□□□□ 0.02
NSMCE1-208ENST00000565070 A0A0D9SFI3 127 aa15.15■□□□□ 0.02
NSMCE1-208ENST00000565070 ECE2O60344 883 aa15.15■□□□□ 0.02
NSMCE1-208ENST00000565070 CHGBP05060 677 aa15.15■□□□□ 0.02
NSMCE1-208ENST00000565070 DEKP35659 375 aaKnown RBP15.15■□□□□ 0.02
NSMCE1-208ENST00000565070 RASEFQ8IZ41 740 aa15.15■□□□□ 0.02
NSMCE1-208ENST00000565070 WDR66Q8TBY9 1149 aa15.15■□□□□ 0.02
NSMCE1-208ENST00000565070 MAP4K1Q92918 833 aa15.15■□□□□ 0.02
NSMCE1-208ENST00000565070 TNPO1Q92973 898 aaKnown RBP15.15■□□□□ 0.02
NSMCE1-208ENST00000565070 DNAJC2Q99543 621 aaKnown RBP15.15■□□□□ 0.02
NSMCE1-208ENST00000565070 HMG20BQ9P0W2 317 aa15.15■□□□□ 0.02
NSMCE1-208ENST00000565070 IGSF3O75054 1194 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 SBF1O95248 1867 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 LMNB1P20700 586 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 NECTIN1Q15223 517 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 DOK7Q18PE1 504 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 ZGPATQ8N5A5 531 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms