RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 RUFY3Q7L099 469 aa23.37■■□□□ 1.33
CLN6-205ENST00000564846 STK32BQ9NY57 414 aa23.37■■□□□ 1.33
CLN6-205ENST00000564846 DENND2AQ9ULE3 1009 aa23.37■■□□□ 1.33
CLN6-205ENST00000564846 PARP3Q9Y6F1 533 aa23.37■■□□□ 1.33
CLN6-205ENST00000564846 XDHP47989 1333 aa23.37■■□□□ 1.33
CLN6-205ENST00000564846 ZNF532Q9HCE3 1301 aa23.37■■□□□ 1.33
CLN6-205ENST00000564846 MMP10P09238 476 aa23.37■■□□□ 1.33
CLN6-205ENST00000564846 SF3B2Q13435 895 aaKnown RBP23.37■■□□□ 1.33
CLN6-205ENST00000564846 ANKIB1Q9P2G1 1089 aa23.37■■□□□ 1.33
CLN6-205ENST00000564846 NRXN2Q9P2S2 1712 aa23.37■■□□□ 1.33
CLN6-205ENST00000564846 TCRBV5S4A2TA0A5A2 114 aa23.36■■□□□ 1.33
CLN6-205ENST00000564846 HIBADHP31937 336 aaKnown RBP23.36■■□□□ 1.33
CLN6-205ENST00000564846 WWC3Q9ULE0 1092 aa23.36■■□□□ 1.33
CLN6-205ENST00000564846 PDS5AQ29RF7 1337 aaKnown RBP23.36■■□□□ 1.33
CLN6-205ENST00000564846 GPAA1O43292 621 aa23.35■■□□□ 1.33
CLN6-205ENST00000564846 TMC4Q7Z404 712 aa23.35■■□□□ 1.33
CLN6-205ENST00000564846 PDRG1Q9NUG6 133 aa23.35■■□□□ 1.33
CLN6-205ENST00000564846 CTNNA3Q9UI47 895 aa23.35■■□□□ 1.33
CLN6-205ENST00000564846 DOCK2Q92608 1830 aa23.35■■□□□ 1.33
CLN6-205ENST00000564846 CYP21A2P08686 494 aa23.35■■□□□ 1.33
CLN6-205ENST00000564846 BAG6P46379 1132 aa23.35■■□□□ 1.33
CLN6-205ENST00000564846 ANO8Q9HCE9 1232 aaPredicted RBP23.35■■□□□ 1.33
CLN6-205ENST00000564846 CWC22Q9HCG8 908 aaKnown RBP23.35■■□□□ 1.33
CLN6-205ENST00000564846 KLRK1P26718 216 aa23.34■■□□□ 1.33
CLN6-205ENST00000564846 AK2P54819 239 aa23.34■■□□□ 1.33
CLN6-205ENST00000564846 CUL4AQ13619 759 aa23.34■■□□□ 1.33
CLN6-205ENST00000564846 BLOC1S2Q6QNY1 142 aa23.34■■□□□ 1.33
CLN6-205ENST00000564846 MAGEB6Q8N7X4 407 aa23.34■■□□□ 1.33
CLN6-205ENST00000564846 FOXD4L1Q9NU39 408 aa23.34■■□□□ 1.33
CLN6-205ENST00000564846 LRP2BPQ9P2M1 347 aa23.34■■□□□ 1.33
CLN6-205ENST00000564846 IQSEC3Q9UPP2 1182 aaPredicted RBP23.34■■□□□ 1.33
CLN6-205ENST00000564846 IRS2Q9Y4H2 1338 aa23.34■■□□□ 1.33
CLN6-205ENST00000564846 PDE6BP35913 854 aa23.33■■□□□ 1.33
CLN6-205ENST00000564846 C15orf52Q6ZUT6 534 aaKnown RBP23.32■■□□□ 1.32
CLN6-205ENST00000564846 INTS4Q96HW7 963 aaKnown RBP23.32■■□□□ 1.32
CLN6-205ENST00000564846 LIMCH1Q9UPQ0 1083 aa23.32■■□□□ 1.32
CLN6-205ENST00000564846 TAF6LQ9Y6J9 622 aa23.32■■□□□ 1.32
CLN6-205ENST00000564846 CPA1P15085 419 aa23.32■■□□□ 1.32
CLN6-205ENST00000564846 RPS6KB1P23443 525 aa23.32■■□□□ 1.32
CLN6-205ENST00000564846 NEK1Q96PY6 1258 aa23.32■■□□□ 1.32
CLN6-205ENST00000564846 ALDH8A1Q9H2A2 487 aaPredicted RBP23.32■■□□□ 1.32
CLN6-205ENST00000564846 FOXP2O15409 715 aa23.31■■□□□ 1.32
CLN6-205ENST00000564846 FRAT2O75474 233 aaPredicted RBP23.31■■□□□ 1.32
CLN6-205ENST00000564846 ATP2B4P23634 1241 aa23.31■■□□□ 1.32
CLN6-205ENST00000564846 AIDAQ96BJ3 306 aa23.31■■□□□ 1.32
CLN6-205ENST00000564846 COL1A1P02452 1464 aaPredicted RBP23.31■■□□□ 1.32
CLN6-205ENST00000564846 HMGB1P09429 215 aaKnown RBP23.3■■□□□ 1.32
CLN6-205ENST00000564846 SRGNP10124 158 aa23.3■■□□□ 1.32
CLN6-205ENST00000564846 NPR1P16066 1061 aa23.3■■□□□ 1.32
CLN6-205ENST00000564846 GPSM2P81274 684 aa23.3■■□□□ 1.32
CLN6-205ENST00000564846 NBR1Q14596 966 aa23.3■■□□□ 1.32
CLN6-205ENST00000564846 MSL1Q68DK7 614 aa23.3■■□□□ 1.32
CLN6-205ENST00000564846 NOL8Q76FK4 1167 aaKnown RBP23.3■■□□□ 1.32
CLN6-205ENST00000564846 ABCF2Q9UG63 623 aa23.3■■□□□ 1.32
CLN6-205ENST00000564846 ANKRD1Q15327 319 aa23.29■■□□□ 1.32
CLN6-205ENST00000564846 NFKBIBQ15653 356 aa23.29■■□□□ 1.32
CLN6-205ENST00000564846 PODXL2Q9NZ53 605 aa23.29■■□□□ 1.32
CLN6-205ENST00000564846 NSFL1CQ9UNZ2 370 aaKnown RBP23.29■■□□□ 1.32
CLN6-205ENST00000564846 MYO5AQ9Y4I1 1855 aaKnown RBP23.29■■□□□ 1.32
CLN6-205ENST00000564846 QSER1Q2KHR3 1735 aa23.29■■□□□ 1.32
CLN6-205ENST00000564846 ANKRD31Q8N7Z5 1873 aa23.29■■□□□ 1.32
CLN6-205ENST00000564846 FGAP02671 866 aa23.29■■□□□ 1.32
CLN6-205ENST00000564846 IMMTQ16891 758 aaKnown RBP23.29■■□□□ 1.32
CLN6-205ENST00000564846 ZSCAN31Q96LW9 406 aaPredicted RBP23.29■■□□□ 1.32
CLN6-205ENST00000564846 STRBPQ96SI9 672 aaKnown RBP23.29■■□□□ 1.32
CLN6-205ENST00000564846 ALDH1B1P30837 517 aa23.28■■□□□ 1.32
CLN6-205ENST00000564846 TXNRD3Q86VQ6 643 aa23.28■■□□□ 1.32
CLN6-205ENST00000564846 SP8Q8IXZ3 490 aa23.28■■□□□ 1.32
CLN6-205ENST00000564846 RAI14Q9P0K7 980 aa23.28■■□□□ 1.32
CLN6-205ENST00000564846 PPEF1O14829 653 aaPredicted RBP23.27■■□□□ 1.32
CLN6-205ENST00000564846 TMED8Q6PL24 325 aaPredicted RBP23.27■■□□□ 1.32
CLN6-205ENST00000564846 GGA1Q9UJY5 639 aa23.27■■□□□ 1.32
CLN6-205ENST00000564846 IGSF3O75054 1194 aa23.27■■□□□ 1.32
CLN6-205ENST00000564846 GNAT2P19087 354 aa23.27■■□□□ 1.32
CLN6-205ENST00000564846 ZNF804AQ7Z570 1209 aa23.27■■□□□ 1.32
CLN6-205ENST00000564846 ZGPATQ8N5A5 531 aaKnown RBP23.27■■□□□ 1.32
CLN6-205ENST00000564846 SH2B1Q9NRF2 756 aaPredicted RBP23.27■■□□□ 1.32
CLN6-205ENST00000564846 UFL1O94874 794 aa23.26■■□□□ 1.31
CLN6-205ENST00000564846 TTLL5Q6EMB2 1281 aa23.26■■□□□ 1.31
CLN6-205ENST00000564846 MASTLQ96GX5 879 aa23.26■■□□□ 1.31
CLN6-205ENST00000564846 ZMYM6O95789 1325 aa23.25■■□□□ 1.31
CLN6-205ENST00000564846 PATL2C9JE40 543 aaKnown RBP23.25■■□□□ 1.31
CLN6-205ENST00000564846 E7EWF7 191 aa23.25■■□□□ 1.31
CLN6-205ENST00000564846 MBD4O95243 580 aa23.25■■□□□ 1.31
CLN6-205ENST00000564846 NUCB2P80303 420 aa23.25■■□□□ 1.31
CLN6-205ENST00000564846 RAB3GAP1Q15042 981 aa23.25■■□□□ 1.31
CLN6-205ENST00000564846 STOX1Q6ZVD7 989 aa23.25■■□□□ 1.31
CLN6-205ENST00000564846 DEFB132Q7Z7B7 95 aa23.25■■□□□ 1.31
CLN6-205ENST00000564846 SLC51AQ86UW1 340 aa23.25■■□□□ 1.31
CLN6-205ENST00000564846 ATP6V0A2Q9Y487 856 aa23.25■■□□□ 1.31
CLN6-205ENST00000564846 ZNF213O14771 459 aa23.24■■□□□ 1.31
CLN6-205ENST00000564846 CYP7A1P22680 504 aa23.24■■□□□ 1.31
CLN6-205ENST00000564846 ALX1Q15699 326 aa23.24■■□□□ 1.31
CLN6-205ENST00000564846 TDRD7Q8NHU6 1098 aaKnown RBP23.24■■□□□ 1.31
CLN6-205ENST00000564846 LRRC37AA6NMS7 1700 aa23.24■■□□□ 1.31
CLN6-205ENST00000564846 APPP05067 770 aa23.24■■□□□ 1.31
CLN6-205ENST00000564846 DHX32Q7L7V1 743 aaKnown RBP23.24■■□□□ 1.31
CLN6-205ENST00000564846 COL9A3Q14050 684 aaPredicted RBP23.23■■□□□ 1.31
CLN6-205ENST00000564846 TBC1D16Q8TBP0 767 aa23.23■■□□□ 1.31
CLN6-205ENST00000564846 ARMT1Q9H993 441 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms