RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 C9orf78Q9NZ63 289 aaPredicted RBP18.03■□□□□ 0.48
COMMD4-211ENST00000564815 FANCIQ9NVI1 1328 aa18.02■□□□□ 0.48
COMMD4-211ENST00000564815 MANSC4A6NHS7 340 aaPredicted RBP18.02■□□□□ 0.48
COMMD4-211ENST00000564815 KLRK1P26718 216 aa18.02■□□□□ 0.48
COMMD4-211ENST00000564815 EXOSC9Q06265 439 aaKnown RBP18.02■□□□□ 0.48
COMMD4-211ENST00000564815 LDHAL6AQ6ZMR3 332 aa18.02■□□□□ 0.48
COMMD4-211ENST00000564815 CNNM1Q9NRU3 951 aa18.02■□□□□ 0.48
COMMD4-211ENST00000564815 HPS5Q9UPZ3 1129 aa18.02■□□□□ 0.48
COMMD4-211ENST00000564815 CACNA1FO60840 1977 aa18.01■□□□□ 0.47
COMMD4-211ENST00000564815 PLIN1O60240 522 aa18.01■□□□□ 0.47
COMMD4-211ENST00000564815 FKTNO75072 461 aa18.01■□□□□ 0.47
COMMD4-211ENST00000564815 IL1R1P14778 569 aa18.01■□□□□ 0.47
COMMD4-211ENST00000564815 RBM5P52756 815 aaKnown RBP eCLIP18.01■□□□□ 0.47
COMMD4-211ENST00000564815 FOXO4P98177 505 aa18.01■□□□□ 0.47
COMMD4-211ENST00000564815 BEND3Q5T5X7 828 aa18.01■□□□□ 0.47
COMMD4-211ENST00000564815 SPRYD7Q5W111 196 aa18.01■□□□□ 0.47
COMMD4-211ENST00000564815 LMBR1LQ6UX01 489 aa18.01■□□□□ 0.47
COMMD4-211ENST00000564815 F8W031 263 aaPredicted RBP18■□□□□ 0.47
COMMD4-211ENST00000564815 OTUD7BQ6GQQ9 843 aa18■□□□□ 0.47
COMMD4-211ENST00000564815 FBXO46Q6PJ61 603 aaPredicted RBP18■□□□□ 0.47
COMMD4-211ENST00000564815 CFHR5Q9BXR6 569 aa18■□□□□ 0.47
COMMD4-211ENST00000564815 F6X3S4 739 aa17.99■□□□□ 0.47
COMMD4-211ENST00000564815 GRM8O00222 908 aa17.99■□□□□ 0.47
COMMD4-211ENST00000564815 IREB2P48200 963 aaKnown RBP17.99■□□□□ 0.47
COMMD4-211ENST00000564815 MAP3K11Q16584 847 aa17.99■□□□□ 0.47
COMMD4-211ENST00000564815 CFAP100Q494V2 611 aa17.99■□□□□ 0.47
COMMD4-211ENST00000564815 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-211ENST00000564815 COL1A1P02452 1464 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-211ENST00000564815 ALDH1L1O75891 902 aa17.98■□□□□ 0.47
COMMD4-211ENST00000564815 ZBTB48P10074 688 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-211ENST00000564815 TNFAIP1Q13829 316 aa17.98■□□□□ 0.47
COMMD4-211ENST00000564815 VEZTQ9HBM0 779 aa17.98■□□□□ 0.47
COMMD4-211ENST00000564815 SPEF2Q9C093 1822 aa17.98■□□□□ 0.47
COMMD4-211ENST00000564815 SPDYE2BA6NHP3 402 aa17.97■□□□□ 0.47
COMMD4-211ENST00000564815 SNAP23O00161 211 aa17.97■□□□□ 0.47
COMMD4-211ENST00000564815 SPDYE6P0CI01 402 aa17.97■□□□□ 0.47
COMMD4-211ENST00000564815 UBE4AQ14139 1066 aa17.97■□□□□ 0.47
COMMD4-211ENST00000564815 CERS5Q8N5B7 392 aa17.97■□□□□ 0.47
COMMD4-211ENST00000564815 PRMT6Q96LA8 375 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-211ENST00000564815 HIBADHP31937 336 aaKnown RBP17.96■□□□□ 0.47
COMMD4-211ENST00000564815 SLC4A10Q6U841 1118 aa17.96■□□□□ 0.47
COMMD4-211ENST00000564815 IFNL1Q8IU54 200 aa17.96■□□□□ 0.47
COMMD4-211ENST00000564815 SRCIN1Q9C0H9 1055 aa17.96■□□□□ 0.47
COMMD4-211ENST00000564815 CLRN2A0PK11 232 aa17.95■□□□□ 0.46
COMMD4-211ENST00000564815 ANKRD13AQ8IZ07 590 aa17.95■□□□□ 0.46
COMMD4-211ENST00000564815 WNK4Q96J92 1243 aa17.95■□□□□ 0.46
COMMD4-211ENST00000564815 ZNF594Q96JF6 807 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-211ENST00000564815 FAM205AQ6ZU69 1335 aa17.95■□□□□ 0.46
COMMD4-211ENST00000564815 IRS2Q9Y4H2 1338 aa17.95■□□□□ 0.46
COMMD4-211ENST00000564815 PDE4DIPQ5VU43 2346 aa17.94■□□□□ 0.46
COMMD4-211ENST00000564815 RASA3Q14644 834 aa17.94■□□□□ 0.46
COMMD4-211ENST00000564815 VPS37DQ86XT2 251 aa17.94■□□□□ 0.46
COMMD4-211ENST00000564815 SERPINA10Q9UK55 444 aa17.94■□□□□ 0.46
COMMD4-211ENST00000564815 TNNI2P48788 182 aa17.93■□□□□ 0.46
COMMD4-211ENST00000564815 EPHA10Q5JZY3 1008 aa17.93■□□□□ 0.46
COMMD4-211ENST00000564815 MFSD14BQ5SR56 506 aa17.93■□□□□ 0.46
COMMD4-211ENST00000564815 NBPF12Q5TAG4 269 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-211ENST00000564815 TDRD7Q8NHU6 1098 aaKnown RBP17.93■□□□□ 0.46
COMMD4-211ENST00000564815 PCDH10Q9P2E7 1040 aa17.93■□□□□ 0.46
COMMD4-211ENST00000564815 TTF2Q9UNY4 1162 aaKnown RBP17.93■□□□□ 0.46
COMMD4-211ENST00000564815 JAG2Q9Y219 1238 aa17.93■□□□□ 0.46
COMMD4-211ENST00000564815 FRAT2O75474 233 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-211ENST00000564815 USP2O75604 605 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-211ENST00000564815 ZEB1P37275 1124 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-211ENST00000564815 ARHGEF6Q15052 776 aa17.92■□□□□ 0.46
COMMD4-211ENST00000564815 PRPF38BQ5VTL8 546 aaKnown RBP17.92■□□□□ 0.46
COMMD4-211ENST00000564815 INTS3Q68E01 1043 aaKnown RBP17.92■□□□□ 0.46
COMMD4-211ENST00000564815 ERO1AQ96HE7 468 aa17.92■□□□□ 0.46
COMMD4-211ENST00000564815 FZD1Q9UP38 647 aa17.92■□□□□ 0.46
COMMD4-211ENST00000564815 TRIM17Q9Y577 477 aa17.92■□□□□ 0.46
COMMD4-211ENST00000564815 MROH5Q6ZUA9 1318 aa17.92■□□□□ 0.46
COMMD4-211ENST00000564815 CAVIN4Q5BKX8 364 aa17.91■□□□□ 0.46
COMMD4-211ENST00000564815 CLMNQ96JQ2 1002 aa17.91■□□□□ 0.46
COMMD4-211ENST00000564815 FAM84BQ96KN1 310 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-211ENST00000564815 R3HDMLQ9H3Y0 253 aa17.91■□□□□ 0.46
COMMD4-211ENST00000564815 ZNF70Q9UC06 446 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-211ENST00000564815 PCDHAC2Q9Y5I4 1007 aa17.91■□□□□ 0.46
COMMD4-211ENST00000564815 WDHD1O75717 1129 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-211ENST00000564815 GYG1P46976 350 aa17.9■□□□□ 0.46
COMMD4-211ENST00000564815 SPDYE2Q495Y8 402 aa17.9■□□□□ 0.46
COMMD4-211ENST00000564815 DZIP1LQ8IYY4 767 aaKnown RBP17.9■□□□□ 0.46
COMMD4-211ENST00000564815 FAM9BQ8IZU0 186 aa17.9■□□□□ 0.46
COMMD4-211ENST00000564815 TBC1D22AQ8WUA7 517 aa17.9■□□□□ 0.46
COMMD4-211ENST00000564815 TDRD3Q9H7E2 651 aaKnown RBP17.9■□□□□ 0.46
COMMD4-211ENST00000564815 CRKP46108 304 aa17.88■□□□□ 0.45
COMMD4-211ENST00000564815 MAP3K9P80192 1104 aa17.88■□□□□ 0.45
COMMD4-211ENST00000564815 HDLBPQ00341 1268 aaKnown RBP17.88■□□□□ 0.45
COMMD4-211ENST00000564815 HOOK2Q96ED9 719 aa17.88■□□□□ 0.45
COMMD4-211ENST00000564815 SUCLG2Q96I99 432 aa17.88■□□□□ 0.45
COMMD4-211ENST00000564815 SPINK5Q9NQ38 1064 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-211ENST00000564815 RIPOR2Q9Y4F9 1068 aa17.88■□□□□ 0.45
COMMD4-211ENST00000564815 CSADQ9Y600 493 aa17.88■□□□□ 0.45
COMMD4-211ENST00000564815 TESPA1A2RU30 521 aaPredicted RBP17.87■□□□□ 0.45
COMMD4-211ENST00000564815 IGF2BP3O00425 579 aaKnown RBP eCLIP17.87■□□□□ 0.45
COMMD4-211ENST00000564815 SP3Q02447 781 aa17.87■□□□□ 0.45
COMMD4-211ENST00000564815 METTL24Q5JXM2 366 aa17.87■□□□□ 0.45
COMMD4-211ENST00000564815 OTOP1Q7RTM1 612 aa17.87■□□□□ 0.45
COMMD4-211ENST00000564815 FBXO33Q7Z6M2 555 aa17.87■□□□□ 0.45
COMMD4-211ENST00000564815 OPTNQ96CV9 577 aa17.87■□□□□ 0.45
COMMD4-211ENST00000564815 PUS3Q9BZE2 481 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms