RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 CLIC4Q9Y696 253 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 DMTNQ08495 405 aa18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 ATP2B3Q16720 1220 aa18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 RTEL1Q9NZ71 1219 aa18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 ZNF330Q9Y3S2 320 aaPredicted RBP18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 TJP1Q07157 1748 aa18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 ZSCAN20P17040 1043 aaPredicted RBP18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 UTP14CQ5TAP6 766 aaKnown RBP18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 ADALQ6DHV7 355 aa18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 FILIP1Q7Z7B0 1213 aa18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 FBXL16Q8N461 479 aa18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 AOPEPQ8N6M6 819 aa18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 MRPS27Q92552 414 aaKnown RBP18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 SDF4Q9BRK5 362 aa18.07■□□□□ 0.48
GTF3C1-205ENST00000564747 NDUFA8P51970 172 aa18.06■□□□□ 0.48
GTF3C1-205ENST00000564747 IMMTQ16891 758 aaKnown RBP18.06■□□□□ 0.48
GTF3C1-205ENST00000564747 PI16Q6UXB8 463 aa18.06■□□□□ 0.48
GTF3C1-205ENST00000564747 LINC00301Q8NCQ3 95 aa18.06■□□□□ 0.48
GTF3C1-205ENST00000564747 PUS7LQ9H0K6 701 aaKnown RBP18.06■□□□□ 0.48
GTF3C1-205ENST00000564747 TNS3Q68CZ2 1445 aa18.06■□□□□ 0.48
GTF3C1-205ENST00000564747 KLF18A0A0U1RQI7 1052 aa18.06■□□□□ 0.48
GTF3C1-205ENST00000564747 USP27XA6NNY8 438 aa18.06■□□□□ 0.48
GTF3C1-205ENST00000564747 PRC1O43663 620 aa18.06■□□□□ 0.48
GTF3C1-205ENST00000564747 CTNNA3Q9UI47 895 aa18.06■□□□□ 0.48
GTF3C1-205ENST00000564747 PLEKHG2Q9H7P9 1386 aa18.06■□□□□ 0.48
GTF3C1-205ENST00000564747 NUP188Q5SRE5 1749 aa18.05■□□□□ 0.48
GTF3C1-205ENST00000564747 SMTNL1A8MU46 457 aa18.05■□□□□ 0.48
GTF3C1-205ENST00000564747 ERVV-2B6SEH9 535 aa18.05■□□□□ 0.48
GTF3C1-205ENST00000564747 ZAP70P43403 619 aa18.05■□□□□ 0.48
GTF3C1-205ENST00000564747 TOM1L2Q6ZVM7 507 aa18.05■□□□□ 0.48
GTF3C1-205ENST00000564747 C8orf76Q96K31 380 aa18.05■□□□□ 0.48
GTF3C1-205ENST00000564747 HPS5Q9UPZ3 1129 aa18.05■□□□□ 0.48
GTF3C1-205ENST00000564747 SPATA31A3Q5VYP0 1347 aa18.05■□□□□ 0.48
GTF3C1-205ENST00000564747 PCDH11XQ9BZA7 1347 aa18.05■□□□□ 0.48
GTF3C1-205ENST00000564747 PCDH11YQ9BZA8 1340 aa18.05■□□□□ 0.48
GTF3C1-205ENST00000564747 CEP57L1Q8IYX8 460 aa18.05■□□□□ 0.48
GTF3C1-205ENST00000564747 FAM89AQ96GI7 184 aa18.05■□□□□ 0.48
GTF3C1-205ENST00000564747 SKILP12757 684 aa18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 ANTXR2P58335 489 aa18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 STK38Q15208 465 aa18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 SF3A1Q15459 793 aaKnown RBP18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 MB21D2Q8IYB1 491 aaPredicted RBP18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 ISCA1Q9BUE6 129 aa18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 ORC3Q9UBD5 711 aaPredicted RBP18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 ZHX1Q9UKY1 873 aaPredicted RBP18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 GOLGA8BA8MQT2 603 aa18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 NCBP1Q09161 790 aaKnown RBP18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 FBXO18Q8NFZ0 1043 aa18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 ZNF592Q92610 1267 aa18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 CHMP4CQ96CF2 233 aa18.04■□□□□ 0.48
GTF3C1-205ENST00000564747 RBM6P78332 1123 aaKnown RBP18.03■□□□□ 0.48
GTF3C1-205ENST00000564747 NAA30Q147X3 362 aaPredicted RBP18.03■□□□□ 0.48
GTF3C1-205ENST00000564747 AKAP2Q9Y2D5 859 aa18.03■□□□□ 0.48
GTF3C1-205ENST00000564747 NWD2Q9ULI1 1742 aa18.03■□□□□ 0.48
GTF3C1-205ENST00000564747 A0A1W2PQ27 194 aa18.03■□□□□ 0.48
GTF3C1-205ENST00000564747 A0A1W2PQ64 194 aa18.03■□□□□ 0.48
GTF3C1-205ENST00000564747 A0A1W2PQD8 194 aa18.03■□□□□ 0.48
GTF3C1-205ENST00000564747 CCDC69A6NI79 296 aa18.03■□□□□ 0.48
GTF3C1-205ENST00000564747 SPDYE4A6NLX3 237 aa18.03■□□□□ 0.48
GTF3C1-205ENST00000564747 TCIRG1Q13488 830 aa18.03■□□□□ 0.48
GTF3C1-205ENST00000564747 LRRFIP1Q32MZ4 808 aaKnown RBP18.03■□□□□ 0.48
GTF3C1-205ENST00000564747 CPDO75976 1380 aa18.03■□□□□ 0.48
GTF3C1-205ENST00000564747 ZFYP08048 801 aaPredicted RBP18.02■□□□□ 0.48
GTF3C1-205ENST00000564747 BCL11BQ9C0K0 894 aaPredicted RBP18.02■□□□□ 0.48
GTF3C1-205ENST00000564747 KIAA1468Q9P260 1216 aa18.02■□□□□ 0.48
GTF3C1-205ENST00000564747 PAXBP1Q9Y5B6 917 aa18.02■□□□□ 0.48
GTF3C1-205ENST00000564747 KCPQ6ZWJ8 1503 aa18.02■□□□□ 0.48
GTF3C1-205ENST00000564747 KIF28PB7ZC32 967 aa18.02■□□□□ 0.48
GTF3C1-205ENST00000564747 DPCR1Q3MIW9 517 aa18.02■□□□□ 0.48
GTF3C1-205ENST00000564747 MYSM1Q5VVJ2 828 aa18.02■□□□□ 0.48
GTF3C1-205ENST00000564747 CEP135Q66GS9 1140 aa18.02■□□□□ 0.48
GTF3C1-205ENST00000564747 SYNE4Q8N205 404 aa18.02■□□□□ 0.48
GTF3C1-205ENST00000564747 APPBP2Q92624 585 aa18.02■□□□□ 0.48
GTF3C1-205ENST00000564747 NAT10Q9H0A0 1025 aaKnown RBP18.02■□□□□ 0.48
GTF3C1-205ENST00000564747 CPLX1O14810 134 aa18.02■□□□□ 0.47
GTF3C1-205ENST00000564747 SPTLC2O15270 562 aa18.02■□□□□ 0.47
GTF3C1-205ENST00000564747 DHX16O60231 1041 aaKnown RBP18.02■□□□□ 0.47
GTF3C1-205ENST00000564747 NEMFO60524 1076 aa18.02■□□□□ 0.47
GTF3C1-205ENST00000564747 U2AF2P26368 475 aaKnown RBP eCLIP18.02■□□□□ 0.47
GTF3C1-205ENST00000564747 CCZ1BP86790 482 aa18.02■□□□□ 0.47
GTF3C1-205ENST00000564747 CCZ1P86791 482 aaPredicted RBP18.02■□□□□ 0.47
GTF3C1-205ENST00000564747 TAF7LQ5H9L4 462 aa18.02■□□□□ 0.47
GTF3C1-205ENST00000564747 CCDC112Q8NEF3 446 aa18.02■□□□□ 0.47
GTF3C1-205ENST00000564747 NCOA7Q8NI08 942 aa18.02■□□□□ 0.47
GTF3C1-205ENST00000564747 DENND2AQ9ULE3 1009 aa18.02■□□□□ 0.47
GTF3C1-205ENST00000564747 SPEF2Q9C093 1822 aa18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 WDR17Q8IZU2 1322 aa18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 ZNF213O14771 459 aa18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 GPAA1O43292 621 aa18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 KCNG4Q8TDN1 519 aa18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 PRDM11Q9NQV5 511 aa18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 POLR3EQ9NVU0 708 aa18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 TRMT1Q9NXH9 659 aaKnown RBP18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 NEDD4P46934 1319 aa18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 BIN1O00499 593 aa18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 RALYLQ86SE5 291 aaKnown RBP18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 NBPF11Q86T75 865 aa18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 NKX2-3Q8TAU0 364 aa18.01■□□□□ 0.47
GTF3C1-205ENST00000564747 PARP4Q9UKK3 1724 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms