RNA–Protein interactions for RNA: ENST00000564470.1

ATP2A1-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 467 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-207ENST00000564470 TMEM164Q5U3C3 297 aa5.9□□□□□ -1.46
ATP2A1-207ENST00000564470 LACRTQ9GZZ8 138 aa5.9□□□□□ -1.46
ATP2A1-207ENST00000564470 MUC3BQ9H195 1237 aa5.9□□□□□ -1.46
ATP2A1-207ENST00000564470 SRA1Q9HD15 236 aaKnown RBP5.9□□□□□ -1.46
ATP2A1-207ENST00000564470 CTTNBP2Q8WZ74 1663 aa5.9□□□□□ -1.47
ATP2A1-207ENST00000564470 ZBTB39O15060 712 aa5.89□□□□□ -1.47
ATP2A1-207ENST00000564470 SMNDC1O75940 238 aaKnown RBP eCLIP5.89□□□□□ -1.47
ATP2A1-207ENST00000564470 GLB1P16278 677 aa5.89□□□□□ -1.47
ATP2A1-207ENST00000564470 ATP11AP98196 1134 aa5.89□□□□□ -1.47
ATP2A1-207ENST00000564470 DZIP1LQ8IYY4 767 aaKnown RBP5.89□□□□□ -1.47
ATP2A1-207ENST00000564470 AGGF1Q8N302 714 aaeCLIP5.89□□□□□ -1.47
ATP2A1-207ENST00000564470 YEATS2Q9ULM3 1422 aa5.89□□□□□ -1.47
ATP2A1-207ENST00000564470 CDC27P30260 824 aa5.88□□□□□ -1.47
ATP2A1-207ENST00000564470 HSPA2P54652 639 aa5.88□□□□□ -1.47
ATP2A1-207ENST00000564470 TXNDC11Q6PKC3 985 aa5.88□□□□□ -1.47
ATP2A1-207ENST00000564470 CLP1Q92989 425 aaKnown RBP5.88□□□□□ -1.47
ATP2A1-207ENST00000564470 RNF112Q9ULX5 631 aa5.88□□□□□ -1.47
ATP2A1-207ENST00000564470 CARMIL1Q5VZK9 1371 aa5.88□□□□□ -1.47
ATP2A1-207ENST00000564470 AKNAQ7Z591 1439 aa5.88□□□□□ -1.47
ATP2A1-207ENST00000564470 ABCA8O94911 1581 aa5.88□□□□□ -1.47
ATP2A1-207ENST00000564470 FRMPD1Q5SYB0 1578 aa5.88□□□□□ -1.47
ATP2A1-207ENST00000564470 FAM177BA6PVY3 158 aa5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 FSTP19883 344 aa5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 FAM117BQ6P1L5 589 aa5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 NCAPG2Q86XI2 1143 aa5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 ABTB2Q8N961 1025 aa5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 GALNT11Q8NCW6 608 aa5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 CCDC97Q96F63 343 aaPredicted RBP5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 ZMYND15Q9H091 742 aa5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 RASSF4Q9H2L5 321 aa5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 ABI2Q9NYB9 513 aaPredicted RBP5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 UHRF1BP1Q6BDS2 1440 aa5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 ZFYVE16Q7Z3T8 1539 aa5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 RICTORQ6R327 1708 aa5.87□□□□□ -1.47
ATP2A1-207ENST00000564470 ZMYM4Q5VZL5 1548 aa5.86□□□□□ -1.47
ATP2A1-207ENST00000564470 CYP2E1P05181 493 aaPredicted RBP5.86□□□□□ -1.47
ATP2A1-207ENST00000564470 CD68P34810 354 aaPredicted RBP5.86□□□□□ -1.47
ATP2A1-207ENST00000564470 TRIM26Q12899 539 aaPredicted RBP5.86□□□□□ -1.47
ATP2A1-207ENST00000564470 PBXIP1Q96AQ6 731 aa5.86□□□□□ -1.47
ATP2A1-207ENST00000564470 PBX4Q9BYU1 374 aa5.86□□□□□ -1.47
ATP2A1-207ENST00000564470 ELP3Q9H9T3 547 aa5.86□□□□□ -1.47
ATP2A1-207ENST00000564470 SH2B1Q9NRF2 756 aaPredicted RBP5.86□□□□□ -1.47
ATP2A1-207ENST00000564470 SEPT3Q9UH03 358 aa5.86□□□□□ -1.47
ATP2A1-207ENST00000564470 SETD1BQ9UPS6 1966 aaKnown RBP5.86□□□□□ -1.47
ATP2A1-207ENST00000564470 STRCQ7RTU9 1775 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 DENND4BO75064 1496 aaPredicted RBP5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 MAGI2Q86UL8 1455 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 PTPRTO14522 1441 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 FSCN2O14926 492 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 ATP2B4P23634 1241 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 SSTR4P31391 388 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 ACAD11Q709F0 780 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 SLC51AQ86UW1 340 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 ATCAYQ86WG3 371 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 TTC16Q8NEE8 873 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 NUDT16Q96DE0 195 aaKnown RBP5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 UBL7Q96S82 380 aaPredicted RBP5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 CARD10Q9BWT7 1032 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 PCMTD2Q9NV79 361 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 KCNK4Q9NYG8 393 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 STOML1Q9UBI4 398 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 RAXQ9Y2V3 346 aa5.85□□□□□ -1.47
ATP2A1-207ENST00000564470 MED1Q15648 1581 aaPredicted RBP5.84□□□□□ -1.47
ATP2A1-207ENST00000564470 WISP1O95388 367 aa5.84□□□□□ -1.47
ATP2A1-207ENST00000564470 DUOXA2Q1HG44 320 aa5.84□□□□□ -1.47
ATP2A1-207ENST00000564470 PDE12Q6L8Q7 609 aaKnown RBP5.84□□□□□ -1.47
ATP2A1-207ENST00000564470 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.84□□□□□ -1.47
ATP2A1-207ENST00000564470 ZNF438Q7Z4V0 828 aa5.84□□□□□ -1.47
ATP2A1-207ENST00000564470 CEP120Q8N960 986 aa5.84□□□□□ -1.47
ATP2A1-207ENST00000564470 CEP41Q9BYV8 373 aa5.84□□□□□ -1.47
ATP2A1-207ENST00000564470 TMEM63CQ9P1W3 806 aa5.84□□□□□ -1.47
ATP2A1-207ENST00000564470 SLAIN2Q9P270 581 aa5.84□□□□□ -1.47
ATP2A1-207ENST00000564470 SERPINA10Q9UK55 444 aa5.84□□□□□ -1.47
ATP2A1-207ENST00000564470 RAPGEF2Q9Y4G8 1499 aa5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 DHX15O43143 795 aaKnown RBP5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 KIF4AO95239 1232 aa5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 RPLP1P05386 114 aaKnown RBP5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 PCSK2P16519 638 aa5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 PTPRAP18433 802 aa5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 DNM1Q05193 864 aaKnown RBP5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 ADAMTSL4Q6UY14 1074 aa5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 Q6ZS46 218 aa5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 KLHL23Q8NBE8 558 aa5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 EDEM1Q92611 657 aa5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 POP1Q99575 1024 aaKnown RBP5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 CNTN3Q9P232 1028 aa5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 KANSL3Q9P2N6 904 aa5.83□□□□□ -1.48
ATP2A1-207ENST00000564470 DDX3YO15523 660 aaKnown RBP5.82□□□□□ -1.48
ATP2A1-207ENST00000564470 IGLV1-40P01703 118 aa5.82□□□□□ -1.48
ATP2A1-207ENST00000564470 CES1P23141 567 aa5.82□□□□□ -1.48
ATP2A1-207ENST00000564470 CABP4P57796 275 aa5.82□□□□□ -1.48
ATP2A1-207ENST00000564470 C8orf34Q49A92 452 aa5.82□□□□□ -1.48
ATP2A1-207ENST00000564470 C1orf127Q8N9H9 656 aa5.82□□□□□ -1.48
ATP2A1-207ENST00000564470 KLHDC7BQ96G42 594 aa5.82□□□□□ -1.48
ATP2A1-207ENST00000564470 SEC31BQ9NQW1 1179 aa5.82□□□□□ -1.48
ATP2A1-207ENST00000564470 ARHGEF12Q9NZN5 1544 aa5.82□□□□□ -1.48
ATP2A1-207ENST00000564470 FHOD3Q2V2M9 1422 aa5.82□□□□□ -1.48
ATP2A1-207ENST00000564470 LTBP4Q8N2S1 1624 aa5.81□□□□□ -1.48
ATP2A1-207ENST00000564470 GSC2O15499 205 aa5.81□□□□□ -1.48
ATP2A1-207ENST00000564470 SART1O43290 800 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms