RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 IRX3P78415 501 aaPredicted RBP12.96□□□□□ -0.33
TCF4-222ENST00000564228 EN1Q05925 392 aaPredicted RBP12.96□□□□□ -0.33
TCF4-222ENST00000564228 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.33
TCF4-222ENST00000564228 POLA2Q14181 598 aa12.96□□□□□ -0.33
TCF4-222ENST00000564228 MUM1L1Q5H9M0 696 aa12.96□□□□□ -0.33
TCF4-222ENST00000564228 CLEC4GQ6UXB4 293 aa12.96□□□□□ -0.33
TCF4-222ENST00000564228 RBM43Q6ZSC3 357 aaKnown RBP12.96□□□□□ -0.33
TCF4-222ENST00000564228 DRC7Q8IY82 874 aa12.96□□□□□ -0.33
TCF4-222ENST00000564228 TTC14Q96N46 770 aa12.96□□□□□ -0.33
TCF4-222ENST00000564228 STAP2Q9UGK3 403 aa12.96□□□□□ -0.33
TCF4-222ENST00000564228 SMC3Q9UQE7 1217 aa12.96□□□□□ -0.33
TCF4-222ENST00000564228 ERICH4A6NGS2 130 aa12.96□□□□□ -0.34
TCF4-222ENST00000564228 SURF6O75683 361 aaKnown RBP12.96□□□□□ -0.34
TCF4-222ENST00000564228 SLU7O95391 586 aaKnown RBP12.96□□□□□ -0.34
TCF4-222ENST00000564228 H2AFXP16104 143 aaPredicted RBP12.96□□□□□ -0.34
TCF4-222ENST00000564228 SUSD4Q5VX71 490 aa12.96□□□□□ -0.34
TCF4-222ENST00000564228 LMBR1LQ6UX01 489 aa12.96□□□□□ -0.34
TCF4-222ENST00000564228 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.34
TCF4-222ENST00000564228 UPF3BQ9BZI7 483 aaKnown RBP12.96□□□□□ -0.34
TCF4-222ENST00000564228 YY1AP1Q9H869 796 aa12.96□□□□□ -0.34
TCF4-222ENST00000564228 CBX8Q9HC52 389 aa12.96□□□□□ -0.34
TCF4-222ENST00000564228 TFCP2L1Q9NZI6 479 aa12.96□□□□□ -0.34
TCF4-222ENST00000564228 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.96□□□□□ -0.34
TCF4-222ENST00000564228 LIMCH1Q9UPQ0 1083 aa12.96□□□□□ -0.34
TCF4-222ENST00000564228 CASZ1Q86V15 1759 aa12.96□□□□□ -0.34
TCF4-222ENST00000564228 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
TCF4-222ENST00000564228 HMGB2P26583 209 aaKnown RBP12.95□□□□□ -0.34
TCF4-222ENST00000564228 FOXO4P98177 505 aa12.95□□□□□ -0.34
TCF4-222ENST00000564228 EZH2Q15910 746 aaKnown RBP12.95□□□□□ -0.34
TCF4-222ENST00000564228 ZNF827Q17R98 1081 aa12.95□□□□□ -0.34
TCF4-222ENST00000564228 PARP10Q53GL7 1025 aa12.95□□□□□ -0.34
TCF4-222ENST00000564228 TBC1D9BQ66K14 1250 aa12.95□□□□□ -0.34
TCF4-222ENST00000564228 DDX60Q8IY21 1712 aaKnown RBP12.94□□□□□ -0.34
TCF4-222ENST00000564228 TRIM6-TRIM34B2RNG4 842 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 HNRNPH2P55795 449 aaKnown RBP12.94□□□□□ -0.34
TCF4-222ENST00000564228 PTPN14Q15678 1187 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 RABL6Q3YEC7 729 aaPredicted RBP12.94□□□□□ -0.34
TCF4-222ENST00000564228 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
TCF4-222ENST00000564228 SARM1Q6SZW1 724 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 TXLNBQ8N3L3 684 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 CACTINQ8WUQ7 758 aaKnown RBP12.94□□□□□ -0.34
TCF4-222ENST00000564228 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
TCF4-222ENST00000564228 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 TRIM5Q9C035 493 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 DDX19AQ9NUU7 478 aaKnown RBP12.94□□□□□ -0.34
TCF4-222ENST00000564228 PA2G4Q9UQ80 394 aaKnown RBP12.94□□□□□ -0.34
TCF4-222ENST00000564228 LAMB2P55268 1798 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 IRS4O14654 1257 aaPredicted RBP12.94□□□□□ -0.34
TCF4-222ENST00000564228 OS9Q13438 667 aaPredicted RBP12.94□□□□□ -0.34
TCF4-222ENST00000564228 ELF2Q15723 593 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 TEX35Q5T0J7 233 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 LUZP1Q86V48 1076 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 KLHDC4Q8TBB5 520 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 CCDC85AQ96PX6 553 aaPredicted RBP12.94□□□□□ -0.34
TCF4-222ENST00000564228 CLIP2Q9UDT6 1046 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 MTMR6Q9Y217 621 aa12.94□□□□□ -0.34
TCF4-222ENST00000564228 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
TCF4-222ENST00000564228 SH3TC1Q8TE82 1336 aa12.93□□□□□ -0.34
TCF4-222ENST00000564228 CDHR2Q9BYE9 1310 aa12.93□□□□□ -0.34
TCF4-222ENST00000564228 DNM1Q05193 864 aaKnown RBP12.93□□□□□ -0.34
TCF4-222ENST00000564228 DEFB132Q7Z7B7 95 aa12.93□□□□□ -0.34
TCF4-222ENST00000564228 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
TCF4-222ENST00000564228 MRFAP1L1Q96HT8 127 aa12.93□□□□□ -0.34
TCF4-222ENST00000564228 CAMKK2Q96RR4 588 aa12.93□□□□□ -0.34
TCF4-222ENST00000564228 SETDB2Q96T68 719 aa12.93□□□□□ -0.34
TCF4-222ENST00000564228 SIL1Q9H173 461 aa12.93□□□□□ -0.34
TCF4-222ENST00000564228 ZNF446Q9NWS9 450 aa12.93□□□□□ -0.34
TCF4-222ENST00000564228 NRBP1Q9UHY1 535 aa12.93□□□□□ -0.34
TCF4-222ENST00000564228 ECM2O94769 699 aaPredicted RBP12.92□□□□□ -0.34
TCF4-222ENST00000564228 TUBB4AP04350 444 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 BAG6P46379 1132 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 RAD51AP2Q09MP3 1159 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 ANO6Q4KMQ2 910 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 LRRC8AQ8IWT6 810 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 AKT1S1Q96B36 256 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 LRRCC1Q9C099 1032 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 L2HGDHQ9H9P8 463 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 RGL2O15211 777 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 NTSR2O95665 410 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 TPM4P67936 248 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 KRT85P78386 507 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 TMEM132AQ24JP5 1023 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 CTR9Q6PD62 1173 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 ZSCAN31Q96LW9 406 aaPredicted RBP12.92□□□□□ -0.34
TCF4-222ENST00000564228 TNMDQ9H2S6 317 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 SH2B1Q9NRF2 756 aaPredicted RBP12.92□□□□□ -0.34
TCF4-222ENST00000564228 FHOD1Q9Y613 1164 aa12.92□□□□□ -0.34
TCF4-222ENST00000564228 SPEF2Q9C093 1822 aa12.91□□□□□ -0.34
TCF4-222ENST00000564228 ATP8B1O43520 1251 aa12.91□□□□□ -0.34
TCF4-222ENST00000564228 PDE8AO60658 829 aa12.91□□□□□ -0.34
TCF4-222ENST00000564228 HSP90AB4PQ58FF6 505 aa12.91□□□□□ -0.34
TCF4-222ENST00000564228 RUFY3Q7L099 469 aa12.91□□□□□ -0.34
TCF4-222ENST00000564228 ZNF592Q92610 1267 aa12.91□□□□□ -0.34
TCF4-222ENST00000564228 PLA2G12BQ9BX93 195 aa12.91□□□□□ -0.34
TCF4-222ENST00000564228 CLSTN2Q9H4D0 955 aa12.91□□□□□ -0.34
TCF4-222ENST00000564228 SNX14Q9Y5W7 946 aa12.91□□□□□ -0.34
TCF4-222ENST00000564228 NPHP1O15259 732 aa12.9□□□□□ -0.34
TCF4-222ENST00000564228 GYS1P13807 737 aa12.9□□□□□ -0.34
TCF4-222ENST00000564228 AK2P54819 239 aa12.9□□□□□ -0.34
TCF4-222ENST00000564228 CTSWP56202 376 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms