RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 METTL3Q86U44 580 aaKnown RBP11.77□□□□□ -0.53
UBFD1-202ENST00000563366 FLAD1Q8NFF5 587 aa11.77□□□□□ -0.53
UBFD1-202ENST00000563366 RUFY2Q8WXA3 655 aa11.77□□□□□ -0.53
UBFD1-202ENST00000563366 CDC5LQ99459 802 aaKnown RBP11.77□□□□□ -0.53
UBFD1-202ENST00000563366 GREM2Q9H772 168 aa11.77□□□□□ -0.53
UBFD1-202ENST00000563366 CNNM1Q9NRU3 951 aa11.77□□□□□ -0.53
UBFD1-202ENST00000563366 LRRC4BQ9NT99 713 aa11.77□□□□□ -0.53
UBFD1-202ENST00000563366 MROH5Q6ZUA9 1318 aa11.77□□□□□ -0.53
UBFD1-202ENST00000563366 A0A1B0GUL6 1792 aa11.77□□□□□ -0.53
UBFD1-202ENST00000563366 IGHMBP2P38935 993 aaKnown RBP11.76□□□□□ -0.53
UBFD1-202ENST00000563366 MDM2Q00987 491 aaPredicted RBP11.76□□□□□ -0.53
UBFD1-202ENST00000563366 SLC10A5Q5PT55 438 aa11.76□□□□□ -0.53
UBFD1-202ENST00000563366 TSHZ3Q63HK5 1081 aa11.76□□□□□ -0.53
UBFD1-202ENST00000563366 TBC1D9BQ66K14 1250 aa11.76□□□□□ -0.53
UBFD1-202ENST00000563366 NBPF5PQ86XG9 351 aaPredicted RBP11.76□□□□□ -0.53
UBFD1-202ENST00000563366 PHOX2BQ99453 314 aa11.76□□□□□ -0.53
UBFD1-202ENST00000563366 MPHOSPH8Q99549 860 aa11.76□□□□□ -0.53
UBFD1-202ENST00000563366 FAM117AQ9C073 453 aa11.76□□□□□ -0.53
UBFD1-202ENST00000563366 CCDC8Q9H0W5 538 aaPredicted RBP11.76□□□□□ -0.53
UBFD1-202ENST00000563366 EP400Q96L91 3159 aa11.76□□□□□ -0.53
UBFD1-202ENST00000563366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.75□□□□□ -0.53
UBFD1-202ENST00000563366 NPHP1O15259 732 aa11.75□□□□□ -0.53
UBFD1-202ENST00000563366 APBA3O96018 575 aa11.75□□□□□ -0.53
UBFD1-202ENST00000563366 MCCP23508 829 aa11.75□□□□□ -0.53
UBFD1-202ENST00000563366 CHMLP26374 656 aa11.75□□□□□ -0.53
UBFD1-202ENST00000563366 SF3B3Q15393 1217 aaKnown RBP11.75□□□□□ -0.53
UBFD1-202ENST00000563366 LRRFIP1Q32MZ4 808 aaKnown RBP11.75□□□□□ -0.53
UBFD1-202ENST00000563366 LRRC24Q50LG9 513 aa11.75□□□□□ -0.53
UBFD1-202ENST00000563366 METTL24Q5JXM2 366 aa11.75□□□□□ -0.53
UBFD1-202ENST00000563366 CCDC158Q5M9N0 1113 aa11.75□□□□□ -0.53
UBFD1-202ENST00000563366 PXYLP1Q8TE99 480 aa11.75□□□□□ -0.53
UBFD1-202ENST00000563366 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.75□□□□□ -0.53
UBFD1-202ENST00000563366 ZNF594Q96JF6 807 aaPredicted RBP11.75□□□□□ -0.53
UBFD1-202ENST00000563366 GPCPD1Q9NPB8 672 aa11.75□□□□□ -0.53
UBFD1-202ENST00000563366 DIAPH3Q9NSV4 1193 aa11.75□□□□□ -0.53
UBFD1-202ENST00000563366 DBNLQ9UJU6 430 aaKnown RBP11.75□□□□□ -0.53
UBFD1-202ENST00000563366 A0A1B0GUL7 405 aa11.74□□□□□ -0.53
UBFD1-202ENST00000563366 FAM177BA6PVY3 158 aa11.74□□□□□ -0.53
UBFD1-202ENST00000563366 HCLS1P14317 486 aaPredicted RBP11.74□□□□□ -0.53
UBFD1-202ENST00000563366 GORABQ5T7V8 394 aa11.74□□□□□ -0.53
UBFD1-202ENST00000563366 SYNE4Q8N205 404 aa11.74□□□□□ -0.53
UBFD1-202ENST00000563366 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
UBFD1-202ENST00000563366 NEUROD6Q96NK8 337 aa11.74□□□□□ -0.53
UBFD1-202ENST00000563366 NLRP3Q96P20 1036 aa11.74□□□□□ -0.53
UBFD1-202ENST00000563366 ESYT1Q9BSJ8 1104 aa11.74□□□□□ -0.53
UBFD1-202ENST00000563366 SRP68Q9UHB9 627 aaKnown RBP11.74□□□□□ -0.53
UBFD1-202ENST00000563366 RIPOR2Q9Y4F9 1068 aa11.74□□□□□ -0.53
UBFD1-202ENST00000563366 RAD50Q92878 1312 aa11.74□□□□□ -0.53
UBFD1-202ENST00000563366 MYH7P12883 1935 aa11.74□□□□□ -0.53
UBFD1-202ENST00000563366 PDE8BO95263 885 aa11.73□□□□□ -0.53
UBFD1-202ENST00000563366 PUM3Q15397 648 aaKnown RBP11.73□□□□□ -0.53
UBFD1-202ENST00000563366 ATP2B3Q16720 1220 aa11.73□□□□□ -0.53
UBFD1-202ENST00000563366 ERFEQ4G0M1 354 aa11.73□□□□□ -0.53
UBFD1-202ENST00000563366 BICDL1Q6ZP65 573 aa11.73□□□□□ -0.53
UBFD1-202ENST00000563366 CCDC85AQ96PX6 553 aaPredicted RBP11.73□□□□□ -0.53
UBFD1-202ENST00000563366 KCNK17Q96T54 332 aa11.73□□□□□ -0.53
UBFD1-202ENST00000563366 HAUS7Q99871 368 aa11.73□□□□□ -0.53
UBFD1-202ENST00000563366 PUS3Q9BZE2 481 aaKnown RBP11.73□□□□□ -0.53
UBFD1-202ENST00000563366 TLR7Q9NYK1 1049 aaKnown RBP11.73□□□□□ -0.53
UBFD1-202ENST00000563366 RGS17Q9UGC6 210 aaPredicted RBP11.73□□□□□ -0.53
UBFD1-202ENST00000563366 POTEAQ6S8J7 498 aa11.72□□□□□ -0.53
UBFD1-202ENST00000563366 KIAA1211Q6ZU35 1233 aa11.72□□□□□ -0.53
UBFD1-202ENST00000563366 ANKRD18AQ8IVF6 992 aa11.72□□□□□ -0.53
UBFD1-202ENST00000563366 CNBD1Q8NA66 436 aa11.72□□□□□ -0.53
UBFD1-202ENST00000563366 ZNF512BQ96KM6 892 aaPredicted RBP11.72□□□□□ -0.53
UBFD1-202ENST00000563366 DBNDD2Q9BQY9 259 aa11.72□□□□□ -0.53
UBFD1-202ENST00000563366 FSD1Q9BTV5 496 aa11.72□□□□□ -0.53
UBFD1-202ENST00000563366 REPIN1Q9BWE0 567 aaKnown RBP11.72□□□□□ -0.53
UBFD1-202ENST00000563366 NRXN2Q9P2S2 1712 aa11.72□□□□□ -0.53
UBFD1-202ENST00000563366 TNRC6CQ9HCJ0 1690 aaKnown RBP11.71□□□□□ -0.53
UBFD1-202ENST00000563366 GYS1P13807 737 aa11.71□□□□□ -0.53
UBFD1-202ENST00000563366 SLC5A1P13866 664 aa11.71□□□□□ -0.53
UBFD1-202ENST00000563366 ST5P78524 1137 aa11.71□□□□□ -0.53
UBFD1-202ENST00000563366 TTC39AQ5SRH9 613 aa11.71□□□□□ -0.53
UBFD1-202ENST00000563366 ERICH6Q7L0X2 663 aa11.71□□□□□ -0.53
UBFD1-202ENST00000563366 VGLL2Q8N8G2 317 aa11.71□□□□□ -0.53
UBFD1-202ENST00000563366 LPIN2Q92539 896 aa11.71□□□□□ -0.53
UBFD1-202ENST00000563366 TMUB1Q9BVT8 246 aa11.71□□□□□ -0.53
UBFD1-202ENST00000563366 USP26Q9BXU7 913 aa11.71□□□□□ -0.53
UBFD1-202ENST00000563366 BOLA2Q9H3K6 86 aa11.71□□□□□ -0.53
UBFD1-202ENST00000563366 TFCP2L1Q9NZI6 479 aa11.71□□□□□ -0.53
UBFD1-202ENST00000563366 FAM198AQ9UFP1 575 aa11.71□□□□□ -0.53
UBFD1-202ENST00000563366 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.71□□□□□ -0.53
UBFD1-202ENST00000563366 MYH13Q9UKX3 1938 aa11.7□□□□□ -0.54
UBFD1-202ENST00000563366 SGSM2O43147 1006 aa11.7□□□□□ -0.54
UBFD1-202ENST00000563366 ST18O60284 1047 aa11.7□□□□□ -0.54
UBFD1-202ENST00000563366 MAP4K4O95819 1239 aaPredicted RBP11.7□□□□□ -0.54
UBFD1-202ENST00000563366 IFIT1P09914 478 aaKnown RBP11.7□□□□□ -0.54
UBFD1-202ENST00000563366 ANAPC15P60006 121 aa11.7□□□□□ -0.54
UBFD1-202ENST00000563366 TIMM10P62072 90 aa11.7□□□□□ -0.54
UBFD1-202ENST00000563366 SF3B2Q13435 895 aaKnown RBP11.7□□□□□ -0.54
UBFD1-202ENST00000563366 NFIXQ14938 502 aa11.7□□□□□ -0.54
UBFD1-202ENST00000563366 VARS2Q5ST30 1063 aaKnown RBP11.7□□□□□ -0.54
UBFD1-202ENST00000563366 NLGN1Q8N2Q7 840 aa11.7□□□□□ -0.54
UBFD1-202ENST00000563366 NLRP7Q8WX94 980 aa11.7□□□□□ -0.54
UBFD1-202ENST00000563366 XAGE2Q96GT9 111 aa11.7□□□□□ -0.54
UBFD1-202ENST00000563366 ANO2Q9NQ90 1003 aa11.7□□□□□ -0.54
UBFD1-202ENST00000563366 BSDC1Q9NW68 430 aaPredicted RBP11.7□□□□□ -0.54
UBFD1-202ENST00000563366 TSKSQ9UJT2 592 aa11.7□□□□□ -0.54
UBFD1-202ENST00000563366 AKAP11Q9UKA4 1901 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms