RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 MED23Q9ULK4 1368 aa11.92□□□□□ -0.5
RPAP1-205ENST00000563293 ELL2O00472 640 aaPredicted RBP11.92□□□□□ -0.5
RPAP1-205ENST00000563293 NF2P35240 595 aa11.92□□□□□ -0.5
RPAP1-205ENST00000563293 STRIP1Q5VSL9 837 aa11.92□□□□□ -0.5
RPAP1-205ENST00000563293 OGFOD1Q8N543 542 aa11.92□□□□□ -0.5
RPAP1-205ENST00000563293 CCDC191Q8NCU4 936 aa11.92□□□□□ -0.5
RPAP1-205ENST00000563293 TTLL11Q8NHH1 800 aa11.92□□□□□ -0.5
RPAP1-205ENST00000563293 SLC10A4Q96EP9 437 aa11.92□□□□□ -0.5
RPAP1-205ENST00000563293 WNK4Q96J92 1243 aa11.92□□□□□ -0.5
RPAP1-205ENST00000563293 GREM2Q9H772 168 aa11.92□□□□□ -0.5
RPAP1-205ENST00000563293 SMC4Q9NTJ3 1288 aa11.92□□□□□ -0.5
RPAP1-205ENST00000563293 COL6A3P12111 3177 aa11.91□□□□□ -0.5
RPAP1-205ENST00000563293 SNAP23O00161 211 aa11.91□□□□□ -0.5
RPAP1-205ENST00000563293 NEFLP07196 543 aa11.91□□□□□ -0.5
RPAP1-205ENST00000563293 CCT4P50991 539 aaKnown RBP11.91□□□□□ -0.5
RPAP1-205ENST00000563293 CRHR2Q13324 411 aa11.91□□□□□ -0.5
RPAP1-205ENST00000563293 INTS3Q68E01 1043 aaKnown RBP11.91□□□□□ -0.5
RPAP1-205ENST00000563293 TTLL5Q6EMB2 1281 aa11.91□□□□□ -0.5
RPAP1-205ENST00000563293 SSH1Q8WYL5 1049 aa11.91□□□□□ -0.5
RPAP1-205ENST00000563293 ARMC5Q96C12 935 aa11.91□□□□□ -0.5
RPAP1-205ENST00000563293 DEFB129Q9H1M3 183 aa11.91□□□□□ -0.5
RPAP1-205ENST00000563293 BSDC1Q9NW68 430 aaPredicted RBP11.91□□□□□ -0.5
RPAP1-205ENST00000563293 CWC25Q9NXE8 425 aaPredicted RBP11.91□□□□□ -0.5
RPAP1-205ENST00000563293 PTPRCP08575 1304 aa11.9□□□□□ -0.5
RPAP1-205ENST00000563293 MANSC4A6NHS7 340 aaPredicted RBP11.9□□□□□ -0.5
RPAP1-205ENST00000563293 ALDH1A1P00352 501 aa11.9□□□□□ -0.5
RPAP1-205ENST00000563293 IGKV5-2P06315 115 aa11.9□□□□□ -0.5
RPAP1-205ENST00000563293 RRP1P56182 461 aaKnown RBP11.9□□□□□ -0.5
RPAP1-205ENST00000563293 CTSWP56202 376 aa11.9□□□□□ -0.5
RPAP1-205ENST00000563293 GTF2IP78347 998 aa11.9□□□□□ -0.5
RPAP1-205ENST00000563293 PDE3AQ14432 1141 aa11.9□□□□□ -0.5
RPAP1-205ENST00000563293 MAP3K11Q16584 847 aa11.9□□□□□ -0.5
RPAP1-205ENST00000563293 ERICH6BQ5W0A0 696 aa11.9□□□□□ -0.5
RPAP1-205ENST00000563293 CERS5Q8N5B7 392 aa11.9□□□□□ -0.5
RPAP1-205ENST00000563293 MRPL50Q8N5N7 158 aaKnown RBP11.9□□□□□ -0.5
RPAP1-205ENST00000563293 METTL22Q9BUU2 404 aaPredicted RBP11.9□□□□□ -0.5
RPAP1-205ENST00000563293 COA1Q9GZY4 146 aa11.9□□□□□ -0.5
RPAP1-205ENST00000563293 LAMB1P07942 1786 aa11.9□□□□□ -0.51
RPAP1-205ENST00000563293 LAMA3Q16787 3333 aa11.89□□□□□ -0.51
RPAP1-205ENST00000563293 BCAR3O75815 825 aa11.89□□□□□ -0.51
RPAP1-205ENST00000563293 SLC4A2P04920 1241 aa11.89□□□□□ -0.51
RPAP1-205ENST00000563293 NBPF12Q5TAG4 269 aaPredicted RBP11.89□□□□□ -0.51
RPAP1-205ENST00000563293 ZKSCAN2Q63HK3 967 aa11.89□□□□□ -0.51
RPAP1-205ENST00000563293 APOBEC3FQ8IUX4 373 aaKnown RBP11.89□□□□□ -0.51
RPAP1-205ENST00000563293 API5Q9BZZ5 524 aaKnown RBP11.89□□□□□ -0.51
RPAP1-205ENST00000563293 MYH3P11055 1940 aa11.88□□□□□ -0.51
RPAP1-205ENST00000563293 CLRN2A0PK11 232 aa11.88□□□□□ -0.51
RPAP1-205ENST00000563293 USP2O75604 605 aaPredicted RBP11.88□□□□□ -0.51
RPAP1-205ENST00000563293 MYCP01106 439 aaPredicted RBP11.88□□□□□ -0.51
RPAP1-205ENST00000563293 ZBTB48P10074 688 aaPredicted RBP11.88□□□□□ -0.51
RPAP1-205ENST00000563293 INHBEP58166 350 aa11.88□□□□□ -0.51
RPAP1-205ENST00000563293 ZNF333Q96JL9 665 aa11.88□□□□□ -0.51
RPAP1-205ENST00000563293 PRMT6Q96LA8 375 aaPredicted RBP11.88□□□□□ -0.51
RPAP1-205ENST00000563293 CDC5LQ99459 802 aaKnown RBP11.88□□□□□ -0.51
RPAP1-205ENST00000563293 EFCC1Q9HA90 598 aa11.88□□□□□ -0.51
RPAP1-205ENST00000563293 MAP3K2Q9Y2U5 619 aa11.88□□□□□ -0.51
RPAP1-205ENST00000563293 ZSWIM8A7E2V4 1837 aa11.88□□□□□ -0.51
RPAP1-205ENST00000563293 ZNF804BA4D1E1 1349 aa11.87□□□□□ -0.51
RPAP1-205ENST00000563293 MYO3BQ8WXR4 1341 aa11.87□□□□□ -0.51
RPAP1-205ENST00000563293 F8W031 263 aaPredicted RBP11.87□□□□□ -0.51
RPAP1-205ENST00000563293 H0YGN5 161 aa11.87□□□□□ -0.51
RPAP1-205ENST00000563293 HSP90B1P14625 803 aaKnown RBP11.87□□□□□ -0.51
RPAP1-205ENST00000563293 SP3Q02447 781 aa11.87□□□□□ -0.51
RPAP1-205ENST00000563293 AAMPQ13685 434 aa11.87□□□□□ -0.51
RPAP1-205ENST00000563293 CWF19L2Q2TBE0 894 aaKnown RBP11.87□□□□□ -0.51
RPAP1-205ENST00000563293 ATF7IPQ6VMQ6 1270 aa11.87□□□□□ -0.51
RPAP1-205ENST00000563293 CDAN1Q8IWY9 1227 aa11.87□□□□□ -0.51
RPAP1-205ENST00000563293 CNKSR2Q8WXI2 1034 aa11.87□□□□□ -0.51
RPAP1-205ENST00000563293 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
RPAP1-205ENST00000563293 ERO1AQ96HE7 468 aa11.87□□□□□ -0.51
RPAP1-205ENST00000563293 CHMP4BQ9H444 224 aaKnown RBP11.87□□□□□ -0.51
RPAP1-205ENST00000563293 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
RPAP1-205ENST00000563293 JAG2Q9Y219 1238 aa11.87□□□□□ -0.51
RPAP1-205ENST00000563293 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
RPAP1-205ENST00000563293 TESPA1A2RU30 521 aaPredicted RBP11.86□□□□□ -0.51
RPAP1-205ENST00000563293 DDX58O95786 925 aaKnown RBP11.86□□□□□ -0.51
RPAP1-205ENST00000563293 DLGAP5Q15398 846 aa11.86□□□□□ -0.51
RPAP1-205ENST00000563293 CD209Q9NNX6 404 aa11.86□□□□□ -0.51
RPAP1-205ENST00000563293 LEMD3Q9Y2U8 911 aa11.86□□□□□ -0.51
RPAP1-205ENST00000563293 PTCH2Q9Y6C5 1203 aa11.86□□□□□ -0.51
RPAP1-205ENST00000563293 CACNA1FO60840 1977 aa11.86□□□□□ -0.51
RPAP1-205ENST00000563293 OTOFQ9HC10 1997 aa11.86□□□□□ -0.51
RPAP1-205ENST00000563293 PI4KAP2A4QPH2 592 aa11.85□□□□□ -0.51
RPAP1-205ENST00000563293 TAF5LO75529 589 aa11.85□□□□□ -0.51
RPAP1-205ENST00000563293 CFAP100Q494V2 611 aa11.85□□□□□ -0.51
RPAP1-205ENST00000563293 FTSJ3Q8IY81 847 aaKnown RBP11.85□□□□□ -0.51
RPAP1-205ENST00000563293 DZIP1LQ8IYY4 767 aaKnown RBP11.85□□□□□ -0.51
RPAP1-205ENST00000563293 PI4KAP1Q8N8J0 262 aa11.85□□□□□ -0.51
RPAP1-205ENST00000563293 MTMR14Q8NCE2 650 aa11.85□□□□□ -0.51
RPAP1-205ENST00000563293 FRAT1Q92837 279 aaPredicted RBP11.85□□□□□ -0.51
RPAP1-205ENST00000563293 MS4A4AQ96JQ5 239 aa11.85□□□□□ -0.51
RPAP1-205ENST00000563293 ARHGAP39Q9C0H5 1083 aa11.85□□□□□ -0.51
RPAP1-205ENST00000563293 ELP3Q9H9T3 547 aa11.85□□□□□ -0.51
RPAP1-205ENST00000563293 ECM29Q5VYK3 1845 aa11.85□□□□□ -0.51
RPAP1-205ENST00000563293 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
RPAP1-205ENST00000563293 H7C1W4 665 aa11.84□□□□□ -0.51
RPAP1-205ENST00000563293 PPP1R12BO60237 982 aaPredicted RBP11.84□□□□□ -0.51
RPAP1-205ENST00000563293 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
RPAP1-205ENST00000563293 FLIIQ13045 1269 aa11.84□□□□□ -0.51
RPAP1-205ENST00000563293 G2E3Q7L622 706 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms