RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ITPRIPQ8IWB1 547 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 NIM1KQ8IY84 436 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 KLHDC4Q8TBB5 520 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 GPR101Q96P66 508 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-204ENST00000563130 KDM2BQ8NHM5 1336 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 MED23Q9ULK4 1368 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 DDNO94850 711 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-204ENST00000563130 HOXB3P14651 431 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-204ENST00000563130 MVPQ14764 893 aaKnown RBP7.73□□□□□ -1.17
CNOT1-204ENST00000563130 LRRC24Q50LG9 513 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 TAF7LQ5H9L4 462 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 C15orf52Q6ZUT6 534 aaKnown RBP7.73□□□□□ -1.17
CNOT1-204ENST00000563130 GPC2Q8N158 579 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 VGLL2Q8N8G2 317 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 ZNF526Q8TF50 670 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-204ENST00000563130 ZC3H12CQ9C0D7 883 aaKnown RBP7.73□□□□□ -1.17
CNOT1-204ENST00000563130 NMRK2Q9NPI5 230 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 COPRSQ9NQ92 184 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 CNNM1Q9NRU3 951 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 ZNF804BA4D1E1 1349 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 WDR90Q96KV7 1748 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 A0A1B0GUL6 1792 aa7.73□□□□□ -1.17
CNOT1-204ENST00000563130 SNAP23O00161 211 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 TAF5LO75529 589 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 CXCL9Q07325 125 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 TMEM132AQ24JP5 1023 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 C20orf194Q5TEA3 1177 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 TXNRD3Q86VQ6 643 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-204ENST00000563130 MROH5Q6ZUA9 1318 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 EYA2O00167 538 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 CIAO1O76071 339 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 KLRK1P26718 216 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 EIF6P56537 245 aaKnown RBP7.72□□□□□ -1.17
CNOT1-204ENST00000563130 ATG9AQ7Z3C6 839 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 ZNF710Q8N1W2 664 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 HELBQ8NG08 1087 aaPredicted RBP7.72□□□□□ -1.17
CNOT1-204ENST00000563130 DBNDD1Q9H9R9 158 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 DDX19BQ9UMR2 479 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 COG6Q9Y2V7 657 aa7.72□□□□□ -1.17
CNOT1-204ENST00000563130 PNMA6EA0A0J9YXQ4 647 aa7.71□□□□□ -1.17
CNOT1-204ENST00000563130 SRGAP3O43295 1099 aa7.71□□□□□ -1.17
CNOT1-204ENST00000563130 ECE2O60344 883 aa7.71□□□□□ -1.17
CNOT1-204ENST00000563130 PDE8BO95263 885 aa7.71□□□□□ -1.17
CNOT1-204ENST00000563130 SLC34A2O95436 690 aa7.71□□□□□ -1.17
CNOT1-204ENST00000563130 UBE4AQ14139 1066 aa7.71□□□□□ -1.17
CNOT1-204ENST00000563130 PODNQ7Z5L7 613 aa7.71□□□□□ -1.17
CNOT1-204ENST00000563130 FAM163AQ96GL9 167 aaPredicted RBP7.71□□□□□ -1.17
CNOT1-204ENST00000563130 ZBTB40Q9NUA8 1239 aa7.71□□□□□ -1.17
CNOT1-204ENST00000563130 VEGFAP15692 232 aaPredicted RBP7.71□□□□□ -1.18
CNOT1-204ENST00000563130 SCNN1DP51172 638 aa7.71□□□□□ -1.18
CNOT1-204ENST00000563130 ATP8B2P98198 1209 aa7.71□□□□□ -1.18
CNOT1-204ENST00000563130 CIAPIN1Q6FI81 312 aa7.71□□□□□ -1.18
CNOT1-204ENST00000563130 SSH3Q8TE77 659 aa7.71□□□□□ -1.18
CNOT1-204ENST00000563130 COA1Q9GZY4 146 aa7.71□□□□□ -1.18
CNOT1-204ENST00000563130 RRAGCQ9HB90 399 aa7.71□□□□□ -1.18
CNOT1-204ENST00000563130 ZSWIM6Q9HCJ5 1215 aa7.71□□□□□ -1.18
CNOT1-204ENST00000563130 KCNQ5Q9NR82 932 aa7.71□□□□□ -1.18
CNOT1-204ENST00000563130 PA2G4Q9UQ80 394 aaKnown RBP7.71□□□□□ -1.18
CNOT1-204ENST00000563130 RAD17O75943 681 aa7.7□□□□□ -1.18
CNOT1-204ENST00000563130 FGFR2P21802 821 aa7.7□□□□□ -1.18
CNOT1-204ENST00000563130 RRP1P56182 461 aaKnown RBP7.7□□□□□ -1.18
CNOT1-204ENST00000563130 C1orf115Q9H7X2 142 aa7.7□□□□□ -1.18
CNOT1-204ENST00000563130 SCN9AQ15858 1988 aa7.7□□□□□ -1.18
CNOT1-204ENST00000563130 ZNF609O15014 1411 aa7.7□□□□□ -1.18
CNOT1-204ENST00000563130 VIL1P09327 827 aaKnown RBP7.69□□□□□ -1.18
CNOT1-204ENST00000563130 IL15P40933 162 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-204ENST00000563130 TNIP1Q15025 636 aa7.69□□□□□ -1.18
CNOT1-204ENST00000563130 METTL24Q5JXM2 366 aa7.69□□□□□ -1.18
CNOT1-204ENST00000563130 CEP85Q6P2H3 762 aa7.69□□□□□ -1.18
CNOT1-204ENST00000563130 SCN4AP35499 1836 aa7.69□□□□□ -1.18
CNOT1-204ENST00000563130 IQCA1LA6NCM1 817 aa7.69□□□□□ -1.18
CNOT1-204ENST00000563130 PSMD14O00487 310 aa7.69□□□□□ -1.18
CNOT1-204ENST00000563130 TOMM70O94826 608 aa7.69□□□□□ -1.18
CNOT1-204ENST00000563130 IL1R1P14778 569 aa7.69□□□□□ -1.18
CNOT1-204ENST00000563130 KCNJ4P48050 445 aa7.69□□□□□ -1.18
CNOT1-204ENST00000563130 FAM84BQ96KN1 310 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-204ENST00000563130 SIL1Q9H173 461 aa7.69□□□□□ -1.18
CNOT1-204ENST00000563130 CHMP4BQ9H444 224 aaKnown RBP7.69□□□□□ -1.18
CNOT1-204ENST00000563130 CD209Q9NNX6 404 aa7.69□□□□□ -1.18
CNOT1-204ENST00000563130 GJA3Q9Y6H8 435 aa7.69□□□□□ -1.18
CNOT1-204ENST00000563130 PUM3Q15397 648 aaKnown RBP7.68□□□□□ -1.18
CNOT1-204ENST00000563130 RPAP2Q8IXW5 612 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-204ENST00000563130 DPF2Q92785 391 aa7.68□□□□□ -1.18
CNOT1-204ENST00000563130 GMLQ99445 158 aa7.68□□□□□ -1.18
CNOT1-204ENST00000563130 TAF1DQ9H5J8 278 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-204ENST00000563130 GPRC5DQ9NZD1 345 aa7.68□□□□□ -1.18
CNOT1-204ENST00000563130 HACL1Q9UJ83 578 aa7.68□□□□□ -1.18
CNOT1-204ENST00000563130 NOP58Q9Y2X3 529 aaKnown RBP7.68□□□□□ -1.18
CNOT1-204ENST00000563130 PSME4Q14997 1843 aa7.68□□□□□ -1.18
CNOT1-204ENST00000563130 ZNF646O15015 1829 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-204ENST00000563130 RPS12P25398 132 aaKnown RBP7.68□□□□□ -1.18
CNOT1-204ENST00000563130 GMPSP49915 693 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-204ENST00000563130 DACT2Q5SW24 774 aa7.68□□□□□ -1.18
CNOT1-204ENST00000563130 STRIP1Q5VSL9 837 aa7.68□□□□□ -1.18
CNOT1-204ENST00000563130 FBXO33Q7Z6M2 555 aa7.68□□□□□ -1.18
CNOT1-204ENST00000563130 SIRT2Q8IXJ6 389 aa7.68□□□□□ -1.18
CNOT1-204ENST00000563130 LPIN2Q92539 896 aa7.68□□□□□ -1.18
CNOT1-204ENST00000563130 CEP126Q9P2H0 1117 aa7.68□□□□□ -1.18
CNOT1-204ENST00000563130 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms