RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 TTLL5Q6EMB2 1281 aa23.01■■□□□ 1.27
RAB40C-207ENST00000563109 GJA3Q9Y6H8 435 aa23.01■■□□□ 1.27
RAB40C-207ENST00000563109 PSMD14O00487 310 aa23■■□□□ 1.27
RAB40C-207ENST00000563109 ZBTB22O15209 634 aa23■■□□□ 1.27
RAB40C-207ENST00000563109 GPC2Q8N158 579 aa23■■□□□ 1.27
RAB40C-207ENST00000563109 ZNF512BQ96KM6 892 aaPredicted RBP23■■□□□ 1.27
RAB40C-207ENST00000563109 PDS5AQ29RF7 1337 aaKnown RBP23■■□□□ 1.27
RAB40C-207ENST00000563109 FAM205AQ6ZU69 1335 aa23■■□□□ 1.27
RAB40C-207ENST00000563109 COL1A1P02452 1464 aaPredicted RBP22.99■■□□□ 1.27
RAB40C-207ENST00000563109 RASGRF1Q13972 1273 aa22.99■■□□□ 1.27
RAB40C-207ENST00000563109 TBC1D22AQ8WUA7 517 aa22.99■■□□□ 1.27
RAB40C-207ENST00000563109 KCNQ5Q9NR82 932 aa22.99■■□□□ 1.27
RAB40C-207ENST00000563109 ECHDC1Q9NTX5 307 aa22.99■■□□□ 1.27
RAB40C-207ENST00000563109 MYO3BQ8WXR4 1341 aa22.99■■□□□ 1.27
RAB40C-207ENST00000563109 MX1P20591 662 aa22.98■■□□□ 1.27
RAB40C-207ENST00000563109 SPATA5Q8NB90 893 aa22.98■■□□□ 1.27
RAB40C-207ENST00000563109 WDR66Q8TBY9 1149 aa22.98■■□□□ 1.27
RAB40C-207ENST00000563109 JAG2Q9Y219 1238 aa22.98■■□□□ 1.27
RAB40C-207ENST00000563109 TTC41PQ6P2S7 1318 aa22.98■■□□□ 1.27
RAB40C-207ENST00000563109 AKAP11Q9UKA4 1901 aa22.98■■□□□ 1.27
RAB40C-207ENST00000563109 GLTPD2A6NH11 291 aa22.97■■□□□ 1.27
RAB40C-207ENST00000563109 VIL1P09327 827 aaKnown RBP22.97■■□□□ 1.27
RAB40C-207ENST00000563109 MCAMP43121 646 aa22.97■■□□□ 1.27
RAB40C-207ENST00000563109 DACT2Q5SW24 774 aa22.97■■□□□ 1.27
RAB40C-207ENST00000563109 RSBN1LQ6PCB5 846 aaPredicted RBP22.97■■□□□ 1.27
RAB40C-207ENST00000563109 C16orf71Q8IYS4 520 aaPredicted RBP22.97■■□□□ 1.27
RAB40C-207ENST00000563109 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.97■■□□□ 1.27
RAB40C-207ENST00000563109 ERC2O15083 957 aa22.96■■□□□ 1.27
RAB40C-207ENST00000563109 RPS12P25398 132 aaKnown RBP22.96■■□□□ 1.27
RAB40C-207ENST00000563109 FKBP1AP62942 108 aaKnown RBP22.96■■□□□ 1.27
RAB40C-207ENST00000563109 MFSD14BQ5SR56 506 aa22.96■■□□□ 1.27
RAB40C-207ENST00000563109 ZGPATQ8N5A5 531 aaKnown RBP22.96■■□□□ 1.27
RAB40C-207ENST00000563109 OTUD7AQ8TE49 926 aaPredicted RBP22.96■■□□□ 1.27
RAB40C-207ENST00000563109 HMG20BQ9P0W2 317 aa22.96■■□□□ 1.27
RAB40C-207ENST00000563109 UTRNP46939 3433 aa22.95■■□□□ 1.27
RAB40C-207ENST00000563109 DDNO94850 711 aaPredicted RBP22.95■■□□□ 1.26
RAB40C-207ENST00000563109 ATP5JP18859 108 aa22.95■■□□□ 1.26
RAB40C-207ENST00000563109 SCARF1Q14162 830 aa22.95■■□□□ 1.26
RAB40C-207ENST00000563109 AGBL3Q8NEM8 1001 aa22.95■■□□□ 1.26
RAB40C-207ENST00000563109 WDR90Q96KV7 1748 aa22.94■■□□□ 1.26
RAB40C-207ENST00000563109 SALL3Q9BXA9 1300 aa22.94■■□□□ 1.26
RAB40C-207ENST00000563109 SNRKQ9NRH2 765 aa22.94■■□□□ 1.26
RAB40C-207ENST00000563109 SALL1Q9NSC2 1324 aa22.93■■□□□ 1.26
RAB40C-207ENST00000563109 LMOD1P29536 600 aaPredicted RBP22.93■■□□□ 1.26
RAB40C-207ENST00000563109 GMPSP49915 693 aaPredicted RBP22.93■■□□□ 1.26
RAB40C-207ENST00000563109 PI16Q6UXB8 463 aa22.93■■□□□ 1.26
RAB40C-207ENST00000563109 MXD3Q9BW11 206 aa22.93■■□□□ 1.26
RAB40C-207ENST00000563109 BOLA2Q9H3K6 86 aa22.93■■□□□ 1.26
RAB40C-207ENST00000563109 ZBTB12Q9Y330 459 aaPredicted RBP22.93■■□□□ 1.26
RAB40C-207ENST00000563109 SCN4AP35499 1836 aa22.92■■□□□ 1.26
RAB40C-207ENST00000563109 MAST2Q6P0Q8 1798 aa22.92■■□□□ 1.26
RAB40C-207ENST00000563109 AOX1Q06278 1338 aa22.92■■□□□ 1.26
RAB40C-207ENST00000563109 GLRX3O76003 335 aaKnown RBP22.92■■□□□ 1.26
RAB40C-207ENST00000563109 PDE1AP54750 535 aa22.92■■□□□ 1.26
RAB40C-207ENST00000563109 TSHZ3Q63HK5 1081 aa22.92■■□□□ 1.26
RAB40C-207ENST00000563109 DNAJC2Q99543 621 aaKnown RBP22.92■■□□□ 1.26
RAB40C-207ENST00000563109 STAP2Q9UGK3 403 aa22.92■■□□□ 1.26
RAB40C-207ENST00000563109 ZAP70P43403 619 aa22.91■■□□□ 1.26
RAB40C-207ENST00000563109 SPTY2D1Q68D10 685 aaPredicted RBP22.91■■□□□ 1.26
RAB40C-207ENST00000563109 CERS5Q8N5B7 392 aa22.91■■□□□ 1.26
RAB40C-207ENST00000563109 DPF2Q92785 391 aa22.91■■□□□ 1.26
RAB40C-207ENST00000563109 L3MBTL3Q96JM7 780 aaPredicted RBP22.91■■□□□ 1.26
RAB40C-207ENST00000563109 ABCF2Q9UG63 623 aa22.91■■□□□ 1.26
RAB40C-207ENST00000563109 HDAC9Q9UKV0 1011 aa22.91■■□□□ 1.26
RAB40C-207ENST00000563109 SUGT1Q9Y2Z0 365 aa22.91■■□□□ 1.26
RAB40C-207ENST00000563109 MAST3O60307 1309 aa22.9■■□□□ 1.26
RAB40C-207ENST00000563109 DOCK2Q92608 1830 aa22.9■■□□□ 1.26
RAB40C-207ENST00000563109 YY1P25490 414 aa22.9■■□□□ 1.26
RAB40C-207ENST00000563109 TTF1Q15361 905 aaPredicted RBP22.9■■□□□ 1.26
RAB40C-207ENST00000563109 KIAA0825Q8IV33 1275 aa22.9■■□□□ 1.26
RAB40C-207ENST00000563109 HAUS7Q99871 368 aa22.9■■□□□ 1.26
RAB40C-207ENST00000563109 IQCA1LA6NCM1 817 aa22.89■■□□□ 1.25
RAB40C-207ENST00000563109 LDHBP07195 334 aaKnown RBP22.89■■□□□ 1.25
RAB40C-207ENST00000563109 USP17L8P0C7I0 530 aa22.89■■□□□ 1.25
RAB40C-207ENST00000563109 PDE4AP27815 886 aa22.89■■□□□ 1.25
RAB40C-207ENST00000563109 PLEKHM2Q8IWE5 1019 aa22.89■■□□□ 1.25
RAB40C-207ENST00000563109 OGFOD1Q8N543 542 aa22.89■■□□□ 1.25
RAB40C-207ENST00000563109 PI4K2BQ8TCG2 481 aa22.89■■□□□ 1.25
RAB40C-207ENST00000563109 ZNF526Q8TF50 670 aaPredicted RBP22.89■■□□□ 1.25
RAB40C-207ENST00000563109 GMLQ99445 158 aa22.89■■□□□ 1.25
RAB40C-207ENST00000563109 GPRC5DQ9NZD1 345 aa22.89■■□□□ 1.25
RAB40C-207ENST00000563109 F8W031 263 aaPredicted RBP22.88■■□□□ 1.25
RAB40C-207ENST00000563109 GOLIM4O00461 696 aa22.88■■□□□ 1.25
RAB40C-207ENST00000563109 CYP2E1P05181 493 aaPredicted RBP22.88■■□□□ 1.25
RAB40C-207ENST00000563109 MMP14P50281 582 aa22.88■■□□□ 1.25
RAB40C-207ENST00000563109 SCNN1DP51172 638 aa22.88■■□□□ 1.25
RAB40C-207ENST00000563109 ERICH6Q7L0X2 663 aa22.88■■□□□ 1.25
RAB40C-207ENST00000563109 DZIP1Q86YF9 867 aaKnown RBP22.88■■□□□ 1.25
RAB40C-207ENST00000563109 MICALL2Q8IY33 904 aa22.88■■□□□ 1.25
RAB40C-207ENST00000563109 PAG1Q9NWQ8 432 aa22.88■■□□□ 1.25
RAB40C-207ENST00000563109 LRP2BPQ9P2M1 347 aa22.88■■□□□ 1.25
RAB40C-207ENST00000563109 NDUFB9Q9Y6M9 179 aa22.88■■□□□ 1.25
RAB40C-207ENST00000563109 H7C1D1 291 aa22.87■■□□□ 1.25
RAB40C-207ENST00000563109 OSBPL3Q9H4L5 887 aa22.87■■□□□ 1.25
RAB40C-207ENST00000563109 CNOT7Q9UIV1 285 aaKnown RBP22.87■■□□□ 1.25
RAB40C-207ENST00000563109 HACL1Q9UJ83 578 aa22.87■■□□□ 1.25
RAB40C-207ENST00000563109 TTF2Q9UNY4 1162 aaKnown RBP22.87■■□□□ 1.25
RAB40C-207ENST00000563109 GTF3C3Q9Y5Q9 886 aa22.87■■□□□ 1.25
RAB40C-207ENST00000563109 MYO5AQ9Y4I1 1855 aaKnown RBP22.86■■□□□ 1.25
RAB40C-207ENST00000563109 PRDX5P30044 214 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms