RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 MYOZ2Q9NPC6 264 aa23.2■■□□□ 1.3
CDH11-206ENST00000562998 ATP2B3Q16720 1220 aa23.19■■□□□ 1.3
CDH11-206ENST00000562998 DNAJC5GQ8N7S2 189 aa23.19■■□□□ 1.3
CDH11-206ENST00000562998 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.19■■□□□ 1.3
CDH11-206ENST00000562998 FBXW7Q969H0 707 aa23.19■■□□□ 1.3
CDH11-206ENST00000562998 NOP58Q9Y2X3 529 aaKnown RBP23.19■■□□□ 1.3
CDH11-206ENST00000562998 HTRA3P83110 453 aa23.18■■□□□ 1.3
CDH11-206ENST00000562998 ZBED3Q96IU2 234 aaPredicted RBP23.18■■□□□ 1.3
CDH11-206ENST00000562998 TFCP2Q12800 502 aa23.17■■□□□ 1.3
CDH11-206ENST00000562998 RBM26Q5T8P6 1007 aaKnown RBP23.17■■□□□ 1.3
CDH11-206ENST00000562998 KIAA0825Q8IV33 1275 aa23.17■■□□□ 1.3
CDH11-206ENST00000562998 POLR2AP24928 1970 aaKnown RBP23.16■■□□□ 1.3
CDH11-206ENST00000562998 FMR1Q06787 632 aaKnown RBP eCLIP23.16■■□□□ 1.3
CDH11-206ENST00000562998 VPS37DQ86XT2 251 aa23.16■■□□□ 1.3
CDH11-206ENST00000562998 OGFOD1Q8N543 542 aa23.16■■□□□ 1.3
CDH11-206ENST00000562998 CREBZFQ9NS37 354 aa23.16■■□□□ 1.3
CDH11-206ENST00000562998 JAG2Q9Y219 1238 aa23.16■■□□□ 1.3
CDH11-206ENST00000562998 ASTN2O75129 1339 aaPredicted RBP23.15■■□□□ 1.3
CDH11-206ENST00000562998 TRAF5O00463 557 aa23.15■■□□□ 1.3
CDH11-206ENST00000562998 SCARF1Q14162 830 aa23.15■■□□□ 1.3
CDH11-206ENST00000562998 CDC37L1Q7L3B6 337 aa23.15■■□□□ 1.3
CDH11-206ENST00000562998 MTMR14Q8NCE2 650 aa23.15■■□□□ 1.3
CDH11-206ENST00000562998 GLIS2Q9BZE0 524 aaPredicted RBP23.15■■□□□ 1.3
CDH11-206ENST00000562998 IQSEC3Q9UPP2 1182 aaPredicted RBP23.15■■□□□ 1.3
CDH11-206ENST00000562998 TRPM7Q96QT4 1865 aa23.15■■□□□ 1.3
CDH11-206ENST00000562998 WNT10BO00744 389 aa23.14■■□□□ 1.29
CDH11-206ENST00000562998 TIMM10P62072 90 aa23.14■■□□□ 1.29
CDH11-206ENST00000562998 G3BP1Q13283 466 aaKnown RBP eCLIP23.14■■□□□ 1.29
CDH11-206ENST00000562998 MFSD14BQ5SR56 506 aa23.14■■□□□ 1.29
CDH11-206ENST00000562998 AKAP2Q9Y2D5 859 aa23.14■■□□□ 1.29
CDH11-206ENST00000562998 PITPNM2Q9BZ72 1349 aa23.13■■□□□ 1.29
CDH11-206ENST00000562998 COL1A1P02452 1464 aaPredicted RBP23.13■■□□□ 1.29
CDH11-206ENST00000562998 A0A1B0GUL7 405 aa23.13■■□□□ 1.29
CDH11-206ENST00000562998 ADORA1P30542 326 aa23.13■■□□□ 1.29
CDH11-206ENST00000562998 NBPF9Q3BBW0 867 aa23.13■■□□□ 1.29
CDH11-206ENST00000562998 CST9Q5W186 159 aa23.13■■□□□ 1.29
CDH11-206ENST00000562998 SIRT2Q8IXJ6 389 aa23.13■■□□□ 1.29
CDH11-206ENST00000562998 CHMP4BQ9H444 224 aaKnown RBP23.13■■□□□ 1.29
CDH11-206ENST00000562998 GGA3Q9NZ52 723 aa23.13■■□□□ 1.29
CDH11-206ENST00000562998 HDAC9Q9UKV0 1011 aa23.13■■□□□ 1.29
CDH11-206ENST00000562998 TMEM88BA6NKF7 163 aa23.12■■□□□ 1.29
CDH11-206ENST00000562998 RPAP2Q8IXW5 612 aaPredicted RBP23.12■■□□□ 1.29
CDH11-206ENST00000562998 GPR108Q9NPR9 543 aa23.12■■□□□ 1.29
CDH11-206ENST00000562998 MYH13Q9UKX3 1938 aa23.12■■□□□ 1.29
CDH11-206ENST00000562998 SURF6O75683 361 aaKnown RBP23.11■■□□□ 1.29
CDH11-206ENST00000562998 PHKA1P46020 1223 aa23.11■■□□□ 1.29
CDH11-206ENST00000562998 GRIK5Q16478 980 aa23.11■■□□□ 1.29
CDH11-206ENST00000562998 ANGEL2Q5VTE6 544 aaKnown RBP23.11■■□□□ 1.29
CDH11-206ENST00000562998 TBC1D22AQ8WUA7 517 aa23.11■■□□□ 1.29
CDH11-206ENST00000562998 DCPSQ96C86 337 aaKnown RBP23.11■■□□□ 1.29
CDH11-206ENST00000562998 RRP1P56182 461 aaKnown RBP23.1■■□□□ 1.29
CDH11-206ENST00000562998 CCDC102BQ68D86 513 aa23.1■■□□□ 1.29
CDH11-206ENST00000562998 KRT26Q7Z3Y9 468 aa23.1■■□□□ 1.29
CDH11-206ENST00000562998 USP48Q86UV5 1035 aa23.1■■□□□ 1.29
CDH11-206ENST00000562998 XAGE2Q96GT9 111 aa23.1■■□□□ 1.29
CDH11-206ENST00000562998 SEMA3EO15041 775 aa23.09■■□□□ 1.29
CDH11-206ENST00000562998 DLK2Q6UY11 383 aa23.09■■□□□ 1.29
CDH11-206ENST00000562998 SUGT1Q9Y2Z0 365 aa23.09■■□□□ 1.29
CDH11-206ENST00000562998 F8W031 263 aaPredicted RBP23.08■■□□□ 1.29
CDH11-206ENST00000562998 FRAT2O75474 233 aaPredicted RBP23.08■■□□□ 1.29
CDH11-206ENST00000562998 CHAF1AQ13111 956 aaPredicted RBP23.08■■□□□ 1.29
CDH11-206ENST00000562998 KLRG1Q96E93 195 aa23.08■■□□□ 1.29
CDH11-206ENST00000562998 GNL3LQ9NVN8 582 aaKnown RBP23.08■■□□□ 1.29
CDH11-206ENST00000562998 SERPINA10Q9UK55 444 aa23.08■■□□□ 1.29
CDH11-206ENST00000562998 PCDHAC2Q9Y5I4 1007 aa23.08■■□□□ 1.29
CDH11-206ENST00000562998 ECM29Q5VYK3 1845 aa23.08■■□□□ 1.28
CDH11-206ENST00000562998 PDS5AQ29RF7 1337 aaKnown RBP23.08■■□□□ 1.28
CDH11-206ENST00000562998 SPDYE2BA6NHP3 402 aa23.07■■□□□ 1.28
CDH11-206ENST00000562998 ADM5C9JUS6 153 aa23.07■■□□□ 1.28
CDH11-206ENST00000562998 SPDYE6P0CI01 402 aa23.07■■□□□ 1.28
CDH11-206ENST00000562998 WDR66Q8TBY9 1149 aa23.07■■□□□ 1.28
CDH11-206ENST00000562998 MRIQ9BWK5 157 aa23.07■■□□□ 1.28
CDH11-206ENST00000562998 TTF2Q9UNY4 1162 aaKnown RBP23.07■■□□□ 1.28
CDH11-206ENST00000562998 SALL1Q9NSC2 1324 aa23.07■■□□□ 1.28
CDH11-206ENST00000562998 HDLBPQ00341 1268 aaKnown RBP23.06■■□□□ 1.28
CDH11-206ENST00000562998 DLGAP5Q15398 846 aa23.06■■□□□ 1.28
CDH11-206ENST00000562998 CFAP100Q494V2 611 aa23.06■■□□□ 1.28
CDH11-206ENST00000562998 TNNI3KQ59H18 835 aa23.06■■□□□ 1.28
CDH11-206ENST00000562998 SULF1Q8IWU6 871 aa23.06■■□□□ 1.28
CDH11-206ENST00000562998 PRMT6Q96LA8 375 aaPredicted RBP23.06■■□□□ 1.28
CDH11-206ENST00000562998 DENND2AQ9ULE3 1009 aa23.06■■□□□ 1.28
CDH11-206ENST00000562998 FPGT-TNNI3KV9GXZ4 949 aa23.06■■□□□ 1.28
CDH11-206ENST00000562998 RASSF10A6NK89 507 aa23.05■■□□□ 1.28
CDH11-206ENST00000562998 RASGRF1Q13972 1273 aa23.05■■□□□ 1.28
CDH11-206ENST00000562998 NEUROD6Q96NK8 337 aa23.05■■□□□ 1.28
CDH11-206ENST00000562998 AOX1Q06278 1338 aa23.05■■□□□ 1.28
CDH11-206ENST00000562998 CNTNAP1P78357 1384 aa23.04■■□□□ 1.28
CDH11-206ENST00000562998 CELF2O95319 508 aaKnown RBP23.04■■□□□ 1.28
CDH11-206ENST00000562998 JMYQ8N9B5 988 aa23.04■■□□□ 1.28
CDH11-206ENST00000562998 EXOC6BQ9Y2D4 811 aa23.04■■□□□ 1.28
CDH11-206ENST00000562998 TLL2Q9Y6L7 1015 aa23.04■■□□□ 1.28
CDH11-206ENST00000562998 ARID4AP29374 1257 aaPredicted RBP23.03■■□□□ 1.28
CDH11-206ENST00000562998 OS9Q13438 667 aaPredicted RBP23.03■■□□□ 1.28
CDH11-206ENST00000562998 HMMRO75330 724 aa23.02■■□□□ 1.28
CDH11-206ENST00000562998 CRKP46108 304 aa23.02■■□□□ 1.28
CDH11-206ENST00000562998 HSP90AB4PQ58FF6 505 aa23.02■■□□□ 1.28
CDH11-206ENST00000562998 ERC1Q8IUD2 1116 aa23.02■■□□□ 1.28
CDH11-206ENST00000562998 EAF2Q96CJ1 260 aaPredicted RBP23.02■■□□□ 1.28
CDH11-206ENST00000562998 CDCA5Q96FF9 252 aa23.02■■□□□ 1.28
CDH11-206ENST00000562998 SAPCD2Q86UD0 394 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms