RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 BCRP11274 1271 aa8.95□□□□□ -0.98
CHD9-205ENST00000562785 CCDC85BQ15834 202 aaPredicted RBP8.95□□□□□ -0.98
CHD9-205ENST00000562785 GRIK5Q16478 980 aa8.95□□□□□ -0.98
CHD9-205ENST00000562785 CHSY3Q70JA7 882 aa8.95□□□□□ -0.98
CHD9-205ENST00000562785 SV2BQ7L1I2 683 aa8.95□□□□□ -0.98
CHD9-205ENST00000562785 VN1R5Q7Z5H4 357 aa8.95□□□□□ -0.98
CHD9-205ENST00000562785 GALNT6Q8NCL4 622 aa8.95□□□□□ -0.98
CHD9-205ENST00000562785 NUDT8Q8WV74 236 aa8.95□□□□□ -0.98
CHD9-205ENST00000562785 C8orf37Q96NL8 207 aa8.95□□□□□ -0.98
CHD9-205ENST00000562785 CEP44Q9C0F1 390 aa8.95□□□□□ -0.98
CHD9-205ENST00000562785 TGIF2Q9GZN2 237 aa8.95□□□□□ -0.98
CHD9-205ENST00000562785 LACRTQ9GZZ8 138 aa8.95□□□□□ -0.98
CHD9-205ENST00000562785 JPH1Q9HDC5 661 aaPredicted RBP8.95□□□□□ -0.98
CHD9-205ENST00000562785 FAAP100Q0VG06 881 aa8.94□□□□□ -0.98
CHD9-205ENST00000562785 TPTE2Q6XPS3 522 aa8.94□□□□□ -0.98
CHD9-205ENST00000562785 SEC31BQ9NQW1 1179 aa8.94□□□□□ -0.98
CHD9-205ENST00000562785 GGT7Q9UJ14 662 aa8.94□□□□□ -0.98
CHD9-205ENST00000562785 SHISA8B8ZZ34 492 aa8.93□□□□□ -0.98
CHD9-205ENST00000562785 ENC1O14682 589 aa8.93□□□□□ -0.98
CHD9-205ENST00000562785 CDC27P30260 824 aa8.93□□□□□ -0.98
CHD9-205ENST00000562785 ZC3H6P61129 1189 aaKnown RBP8.93□□□□□ -0.98
CHD9-205ENST00000562785 PCDH1Q08174 1060 aa8.93□□□□□ -0.98
CHD9-205ENST00000562785 GDF6Q6KF10 455 aaPredicted RBP8.93□□□□□ -0.98
CHD9-205ENST00000562785 NECAB3Q96P71 396 aaPredicted RBP8.93□□□□□ -0.98
CHD9-205ENST00000562785 PRDM6Q9NQX0 595 aa8.93□□□□□ -0.98
CHD9-205ENST00000562785 FAM177BA6PVY3 158 aa8.92□□□□□ -0.98
CHD9-205ENST00000562785 M0R082 166 aa8.92□□□□□ -0.98
CHD9-205ENST00000562785 LILRB5O75023 590 aa8.92□□□□□ -0.98
CHD9-205ENST00000562785 B3GALT4O96024 378 aa8.92□□□□□ -0.98
CHD9-205ENST00000562785 CELA2BP08218 269 aaPredicted RBP8.92□□□□□ -0.98
CHD9-205ENST00000562785 EPHA1P21709 976 aa8.92□□□□□ -0.98
CHD9-205ENST00000562785 AFF1P51825 1210 aaKnown RBP8.92□□□□□ -0.98
CHD9-205ENST00000562785 USP48Q86UV5 1035 aa8.92□□□□□ -0.98
CHD9-205ENST00000562785 ZNF417Q8TAU3 575 aa8.92□□□□□ -0.98
CHD9-205ENST00000562785 BTBD6Q96KE9 485 aa8.92□□□□□ -0.98
CHD9-205ENST00000562785 ZNF587Q96SQ5 575 aaPredicted RBP8.92□□□□□ -0.98
CHD9-205ENST00000562785 RSRP1Q9BUV0 290 aa8.92□□□□□ -0.98
CHD9-205ENST00000562785 DDX41Q9UJV9 622 aaKnown RBP8.92□□□□□ -0.98
CHD9-205ENST00000562785 CELA3AP09093 270 aa8.91□□□□□ -0.98
CHD9-205ENST00000562785 ESRRAP11474 423 aaPredicted RBP8.91□□□□□ -0.98
CHD9-205ENST00000562785 RLBP1P12271 317 aa8.91□□□□□ -0.98
CHD9-205ENST00000562785 BAG6P46379 1132 aa8.91□□□□□ -0.98
CHD9-205ENST00000562785 ZNF394Q53GI3 561 aa8.91□□□□□ -0.98
CHD9-205ENST00000562785 LYPD4Q6UWN0 246 aa8.91□□□□□ -0.98
CHD9-205ENST00000562785 ZNF775Q96BV0 537 aaPredicted RBP8.91□□□□□ -0.98
CHD9-205ENST00000562785 TRIM56Q9BRZ2 755 aaKnown RBP8.91□□□□□ -0.98
CHD9-205ENST00000562785 SRA1Q9HD15 236 aaKnown RBP8.91□□□□□ -0.98
CHD9-205ENST00000562785 SH2B1Q9NRF2 756 aaPredicted RBP8.91□□□□□ -0.98
CHD9-205ENST00000562785 GPN3Q9UHW5 284 aaPredicted RBP8.91□□□□□ -0.98
CHD9-205ENST00000562785 H3BRJ5 948 aa8.9□□□□□ -0.98
CHD9-205ENST00000562785 CABP4P57796 275 aa8.9□□□□□ -0.98
CHD9-205ENST00000562785 PWP1Q13610 501 aa8.9□□□□□ -0.98
CHD9-205ENST00000562785 ZNF423Q2M1K9 1284 aa8.9□□□□□ -0.98
CHD9-205ENST00000562785 LCE2AQ5TA79 106 aaPredicted RBP8.9□□□□□ -0.98
CHD9-205ENST00000562785 TREML4Q6UXN2 200 aa8.9□□□□□ -0.98
CHD9-205ENST00000562785 IL22RA1Q8N6P7 574 aa8.9□□□□□ -0.98
CHD9-205ENST00000562785 CCSER2Q9H7U1 834 aa8.9□□□□□ -0.98
CHD9-205ENST00000562785 TMEM39AQ9NV64 488 aa8.9□□□□□ -0.98
CHD9-205ENST00000562785 KBTBD4Q9NVX7 518 aa8.9□□□□□ -0.98
CHD9-205ENST00000562785 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.9□□□□□ -0.98
CHD9-205ENST00000562785 PCDHGB7Q9Y5F8 929 aa8.9□□□□□ -0.98
CHD9-205ENST00000562785 RACK1P63244 317 aaKnown RBP8.89□□□□□ -0.99
CHD9-205ENST00000562785 IKBKEQ14164 716 aa8.89□□□□□ -0.99
CHD9-205ENST00000562785 C8orf86Q6ZUL3 223 aa8.89□□□□□ -0.99
CHD9-205ENST00000562785 ZNF654Q8IZM8 581 aa8.89□□□□□ -0.99
CHD9-205ENST00000562785 COPRSQ9NQ92 184 aa8.89□□□□□ -0.99
CHD9-205ENST00000562785 BICRAQ9NZM4 1560 aa8.88□□□□□ -0.99
CHD9-205ENST00000562785 LIG3P49916 1009 aa8.88□□□□□ -0.99
CHD9-205ENST00000562785 PPP2R3AQ06190 1150 aa8.88□□□□□ -0.99
CHD9-205ENST00000562785 WHAMMQ8TF30 809 aa8.88□□□□□ -0.99
CHD9-205ENST00000562785 SOX17Q9H6I2 414 aaPredicted RBP8.88□□□□□ -0.99
CHD9-205ENST00000562785 PPME1Q9Y570 386 aa8.88□□□□□ -0.99
CHD9-205ENST00000562785 PAGE1O75459 146 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 AMPD1P23109 780 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 DGKGP49619 791 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 COL9A3Q14050 684 aaPredicted RBP8.87□□□□□ -0.99
CHD9-205ENST00000562785 NAALADL2Q58DX5 795 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 MSL1Q68DK7 614 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 ILDR2Q71H61 639 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 WFDC8Q8IUA0 241 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 PHC3Q8NDX5 983 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 WNT8BQ93098 351 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 RHOVQ96L33 236 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 TMEM74Q96NL1 305 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 TINF2Q9BSI4 451 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 ACBD3Q9H3P7 528 aa8.87□□□□□ -0.99
CHD9-205ENST00000562785 SOX1O00570 391 aaPredicted RBP8.86□□□□□ -0.99
CHD9-205ENST00000562785 NID1P14543 1247 aa8.86□□□□□ -0.99
CHD9-205ENST00000562785 HOXB4P17483 251 aaPredicted RBP8.86□□□□□ -0.99
CHD9-205ENST00000562785 ZNF157P51786 506 aaPredicted RBP8.86□□□□□ -0.99
CHD9-205ENST00000562785 RPS26P62854 115 aaKnown RBP8.86□□□□□ -0.99
CHD9-205ENST00000562785 PIP4K2BP78356 416 aa8.86□□□□□ -0.99
CHD9-205ENST00000562785 PCNX4Q63HM2 1172 aa8.86□□□□□ -0.99
CHD9-205ENST00000562785 ZNF385CQ66K41 422 aaPredicted RBP8.86□□□□□ -0.99
CHD9-205ENST00000562785 TTBK2Q6IQ55 1244 aa8.86□□□□□ -0.99
CHD9-205ENST00000562785 RELL1Q8IUW5 271 aa8.86□□□□□ -0.99
CHD9-205ENST00000562785 NME2P22392 152 aa8.85□□□□□ -0.99
CHD9-205ENST00000562785 GBP2P32456 591 aaPredicted RBP8.85□□□□□ -0.99
CHD9-205ENST00000562785 MAP3K11Q16584 847 aa8.85□□□□□ -0.99
CHD9-205ENST00000562785 AGMOQ6ZNB7 445 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms