RNA–Protein interactions for RNA: ENST00000562772.1

AP003071.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP003071.2, Length 990 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003071.2-201ENST00000562772 TAOK3Q9H2K8 898 aa9.83□□□□□ -0.84
AP003071.2-201ENST00000562772 GLTPD2A6NH11 291 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 GPTP24298 496 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 KCNC4Q03721 635 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 ERFEQ4G0M1 354 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 CCDC93Q567U6 631 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 RTKN2Q8IZC4 609 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 PLBD2Q8NHP8 589 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 XAGE3Q8WTP9 111 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 ZNF428Q96B54 188 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 CRAMP1Q96RY5 1269 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 UTP14AQ9BVJ6 771 aaKnown RBP9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 CHPF2Q9P2E5 772 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 ABCC12Q96J65 1359 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 IL16Q14005 1332 aa9.82□□□□□ -0.84
AP003071.2-201ENST00000562772 FAM177BA6PVY3 158 aa9.81□□□□□ -0.84
AP003071.2-201ENST00000562772 TLL1O43897 1013 aa9.81□□□□□ -0.84
AP003071.2-201ENST00000562772 ANXA1P04083 346 aa9.81□□□□□ -0.84
AP003071.2-201ENST00000562772 TRIM28Q13263 835 aaKnown RBP9.81□□□□□ -0.84
AP003071.2-201ENST00000562772 NLRP10Q86W26 655 aa9.81□□□□□ -0.84
AP003071.2-201ENST00000562772 WWC1Q8IX03 1113 aa9.81□□□□□ -0.84
AP003071.2-201ENST00000562772 MRS2Q9HD23 443 aa9.81□□□□□ -0.84
AP003071.2-201ENST00000562772 NMRK2Q9NPI5 230 aa9.81□□□□□ -0.84
AP003071.2-201ENST00000562772 WDR90Q96KV7 1748 aa9.81□□□□□ -0.84
AP003071.2-201ENST00000562772 SNED1Q8TER0 1413 aa9.81□□□□□ -0.84
AP003071.2-201ENST00000562772 LAMB2P55268 1798 aa9.8□□□□□ -0.84
AP003071.2-201ENST00000562772 SENP3-EIF4A1A0A087X0R7 540 aa9.8□□□□□ -0.84
AP003071.2-201ENST00000562772 NR1I2O75469 434 aa9.8□□□□□ -0.84
AP003071.2-201ENST00000562772 HSPA6P17066 643 aa9.8□□□□□ -0.84
AP003071.2-201ENST00000562772 FKBP4Q02790 459 aaKnown RBP eCLIP9.8□□□□□ -0.84
AP003071.2-201ENST00000562772 AIMP1Q12904 312 aaKnown RBP9.8□□□□□ -0.84
AP003071.2-201ENST00000562772 MYSM1Q5VVJ2 828 aa9.8□□□□□ -0.84
AP003071.2-201ENST00000562772 RBM17Q96I25 401 aaKnown RBP9.8□□□□□ -0.84
AP003071.2-201ENST00000562772 NLRP3Q96P20 1036 aa9.8□□□□□ -0.84
AP003071.2-201ENST00000562772 PSMD1Q99460 953 aa9.8□□□□□ -0.84
AP003071.2-201ENST00000562772 ISCA1Q9BUE6 129 aa9.8□□□□□ -0.84
AP003071.2-201ENST00000562772 PCDHGC3Q9UN70 934 aa9.8□□□□□ -0.84
AP003071.2-201ENST00000562772 PATL2C9JE40 543 aaKnown RBP9.79□□□□□ -0.84
AP003071.2-201ENST00000562772 VEGFAP15692 232 aaPredicted RBP9.79□□□□□ -0.84
AP003071.2-201ENST00000562772 FSTL1Q12841 308 aa9.79□□□□□ -0.84
AP003071.2-201ENST00000562772 RPGRQ92834 1020 aaKnown RBP9.79□□□□□ -0.84
AP003071.2-201ENST00000562772 THAP11Q96EK4 314 aa9.79□□□□□ -0.84
AP003071.2-201ENST00000562772 CCDC97Q96F63 343 aaPredicted RBP9.79□□□□□ -0.84
AP003071.2-201ENST00000562772 DDRGK1Q96HY6 314 aa9.79□□□□□ -0.84
AP003071.2-201ENST00000562772 RRAGCQ9HB90 399 aa9.79□□□□□ -0.84
AP003071.2-201ENST00000562772 SCN4AP35499 1836 aa9.79□□□□□ -0.84
AP003071.2-201ENST00000562772 SH3TC1Q8TE82 1336 aa9.79□□□□□ -0.84
AP003071.2-201ENST00000562772 BBOX1O75936 387 aa9.78□□□□□ -0.84
AP003071.2-201ENST00000562772 CCDC30Q5VVM6 783 aa9.78□□□□□ -0.84
AP003071.2-201ENST00000562772 RNF19BQ6ZMZ0 732 aa9.78□□□□□ -0.84
AP003071.2-201ENST00000562772 WDR63Q8IWG1 891 aa9.78□□□□□ -0.84
AP003071.2-201ENST00000562772 C16orf71Q8IYS4 520 aaPredicted RBP9.78□□□□□ -0.84
AP003071.2-201ENST00000562772 C8orf58Q8NAV2 365 aa9.78□□□□□ -0.84
AP003071.2-201ENST00000562772 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
AP003071.2-201ENST00000562772 VPS33BQ9H267 617 aa9.78□□□□□ -0.84
AP003071.2-201ENST00000562772 DDX60Q8IY21 1712 aaKnown RBP9.77□□□□□ -0.85
AP003071.2-201ENST00000562772 FDX1P10109 184 aa9.77□□□□□ -0.85
AP003071.2-201ENST00000562772 IFFO2Q5TF58 517 aa9.77□□□□□ -0.85
AP003071.2-201ENST00000562772 RSBN1LQ6PCB5 846 aaPredicted RBP9.77□□□□□ -0.85
AP003071.2-201ENST00000562772 TMC4Q7Z404 712 aa9.77□□□□□ -0.85
AP003071.2-201ENST00000562772 SYMPKQ92797 1274 aaKnown RBP9.77□□□□□ -0.85
AP003071.2-201ENST00000562772 LIMD1Q9UGP4 676 aa9.77□□□□□ -0.85
AP003071.2-201ENST00000562772 TRMT112Q9UI30 125 aaKnown RBP9.77□□□□□ -0.85
AP003071.2-201ENST00000562772 PCDHB15Q9Y5E8 787 aa9.77□□□□□ -0.85
AP003071.2-201ENST00000562772 POTECB2RU33 542 aa9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 ELL2O00472 640 aaPredicted RBP9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 IARSP41252 1262 aaKnown RBP9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 PDE4CQ08493 712 aa9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 SF3B3Q15393 1217 aaKnown RBP9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 DIXDC1Q155Q3 683 aa9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 BRICD5Q6PL45 260 aa9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 RIC3Q7Z5B4 369 aa9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 SP8Q8IXZ3 490 aa9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 SYNE4Q8N205 404 aa9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 SMC1BQ8NDV3 1235 aa9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 TMX4Q9H1E5 349 aaPredicted RBP9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 PHAXQ9H814 394 aaKnown RBP9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 POLR3EQ9NVU0 708 aa9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 ATP6V0A2Q9Y487 856 aa9.76□□□□□ -0.85
AP003071.2-201ENST00000562772 TAF1P21675 1872 aa9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 FZD9O00144 591 aa9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 PPEF1O14829 653 aaPredicted RBP9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 SPTLC1O15269 473 aa9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 DDX58O95786 925 aaKnown RBP9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 TWISTNBQ3B726 338 aaPredicted RBP9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 OLFM4Q6UX06 510 aa9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 TSPYL6Q8N831 410 aa9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 CCDC191Q8NCU4 936 aa9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 METTL22Q9BUU2 404 aaPredicted RBP9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 RTFDC1Q9BY42 306 aaPredicted RBP9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 GOPCQ9HD26 462 aa9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 ZNF277Q9NRM2 450 aaPredicted RBP9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 ABCC4O15439 1325 aa9.75□□□□□ -0.85
AP003071.2-201ENST00000562772 LRRC37AA6NMS7 1700 aa9.74□□□□□ -0.85
AP003071.2-201ENST00000562772 IQCA1LA6NCM1 817 aa9.74□□□□□ -0.85
AP003071.2-201ENST00000562772 HCLS1P14317 486 aaPredicted RBP9.74□□□□□ -0.85
AP003071.2-201ENST00000562772 GRAPQ13588 217 aa9.74□□□□□ -0.85
AP003071.2-201ENST00000562772 KSR2Q6VAB6 950 aa9.74□□□□□ -0.85
AP003071.2-201ENST00000562772 DDX46Q7L014 1031 aaKnown RBP9.74□□□□□ -0.85
AP003071.2-201ENST00000562772 FAM160A2Q8N612 972 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms