RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 MTMR14Q8NCE2 650 aa13.09□□□□□ -0.31
BBS4-205ENST00000562219 DEFB129Q9H1M3 183 aa13.09□□□□□ -0.31
BBS4-205ENST00000562219 PPP2R3BQ9Y5P8 575 aa13.09□□□□□ -0.31
BBS4-205ENST00000562219 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
BBS4-205ENST00000562219 MYH13Q9UKX3 1938 aa13.08□□□□□ -0.32
BBS4-205ENST00000562219 MANSC4A6NHS7 340 aaPredicted RBP13.08□□□□□ -0.32
BBS4-205ENST00000562219 MYO1BO43795 1136 aa13.08□□□□□ -0.32
BBS4-205ENST00000562219 TAF5LO75529 589 aa13.08□□□□□ -0.32
BBS4-205ENST00000562219 ZBTB48P10074 688 aaPredicted RBP13.08□□□□□ -0.32
BBS4-205ENST00000562219 IFIT5Q13325 482 aaKnown RBP13.08□□□□□ -0.32
BBS4-205ENST00000562219 MAP3K11Q16584 847 aa13.08□□□□□ -0.32
BBS4-205ENST00000562219 NCBP3Q53F19 620 aaKnown RBP13.08□□□□□ -0.32
BBS4-205ENST00000562219 ZNF804AQ7Z570 1209 aa13.08□□□□□ -0.32
BBS4-205ENST00000562219 R3HDMLQ9H3Y0 253 aa13.08□□□□□ -0.32
BBS4-205ENST00000562219 FZD1Q9UP38 647 aa13.08□□□□□ -0.32
BBS4-205ENST00000562219 CENPFP49454 3210 aa13.08□□□□□ -0.32
BBS4-205ENST00000562219 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
BBS4-205ENST00000562219 SNAP23O00161 211 aa13.07□□□□□ -0.32
BBS4-205ENST00000562219 PPP1R12BO60237 982 aaPredicted RBP13.07□□□□□ -0.32
BBS4-205ENST00000562219 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
BBS4-205ENST00000562219 IL1R1P14778 569 aa13.07□□□□□ -0.32
BBS4-205ENST00000562219 INHBEP58166 350 aa13.07□□□□□ -0.32
BBS4-205ENST00000562219 FKBP1AP62942 108 aaKnown RBP13.07□□□□□ -0.32
BBS4-205ENST00000562219 CCDC184Q52MB2 194 aa13.07□□□□□ -0.32
BBS4-205ENST00000562219 SLC10A4Q96EP9 437 aa13.07□□□□□ -0.32
BBS4-205ENST00000562219 UNCXA6NJT0 531 aa13.06□□□□□ -0.32
BBS4-205ENST00000562219 F8W031 263 aaPredicted RBP13.06□□□□□ -0.32
BBS4-205ENST00000562219 FOXO4P98177 505 aa13.06□□□□□ -0.32
BBS4-205ENST00000562219 IFNL1Q8IU54 200 aa13.06□□□□□ -0.32
BBS4-205ENST00000562219 HELBQ8NG08 1087 aaPredicted RBP13.06□□□□□ -0.32
BBS4-205ENST00000562219 WNK4Q96J92 1243 aa13.06□□□□□ -0.32
BBS4-205ENST00000562219 CLMNQ96JQ2 1002 aa13.06□□□□□ -0.32
BBS4-205ENST00000562219 CHMP3Q9Y3E7 222 aa13.06□□□□□ -0.32
BBS4-205ENST00000562219 CLRN2A0PK11 232 aa13.05□□□□□ -0.32
BBS4-205ENST00000562219 SUPT20HL1Q3ZLR7 823 aa13.05□□□□□ -0.32
BBS4-205ENST00000562219 CFAP100Q494V2 611 aa13.05□□□□□ -0.32
BBS4-205ENST00000562219 VEZTQ9HBM0 779 aa13.05□□□□□ -0.32
BBS4-205ENST00000562219 PCDHAC2Q9Y5I4 1007 aa13.05□□□□□ -0.32
BBS4-205ENST00000562219 KIAA0100Q14667 2235 aaKnown RBP13.04□□□□□ -0.32
BBS4-205ENST00000562219 MKI67P46013 3256 aaKnown RBP13.04□□□□□ -0.32
BBS4-205ENST00000562219 IGF2BP3O00425 579 aaKnown RBP eCLIP13.04□□□□□ -0.32
BBS4-205ENST00000562219 VAMP4O75379 141 aa13.04□□□□□ -0.32
BBS4-205ENST00000562219 IREB2P48200 963 aaKnown RBP13.04□□□□□ -0.32
BBS4-205ENST00000562219 BEND3Q5T5X7 828 aa13.04□□□□□ -0.32
BBS4-205ENST00000562219 PRMT6Q96LA8 375 aaPredicted RBP13.04□□□□□ -0.32
BBS4-205ENST00000562219 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
BBS4-205ENST00000562219 TRIM17Q9Y577 477 aa13.04□□□□□ -0.32
BBS4-205ENST00000562219 F6X3S4 739 aa13.03□□□□□ -0.32
BBS4-205ENST00000562219 GRM8O00222 908 aa13.03□□□□□ -0.32
BBS4-205ENST00000562219 RBM5P52756 815 aaKnown RBP eCLIP13.03□□□□□ -0.32
BBS4-205ENST00000562219 CCDC57Q2TAC2 916 aa13.03□□□□□ -0.32
BBS4-205ENST00000562219 TAF7LQ5H9L4 462 aa13.03□□□□□ -0.32
BBS4-205ENST00000562219 NBPF12Q5TAG4 269 aaPredicted RBP13.03□□□□□ -0.32
BBS4-205ENST00000562219 LMBR1LQ6UX01 489 aa13.03□□□□□ -0.32
BBS4-205ENST00000562219 OTOP1Q7RTM1 612 aa13.03□□□□□ -0.32
BBS4-205ENST00000562219 WDR63Q8IWG1 891 aa13.03□□□□□ -0.32
BBS4-205ENST00000562219 JAG2Q9Y219 1238 aa13.03□□□□□ -0.32
BBS4-205ENST00000562219 AOX1Q06278 1338 aa13.03□□□□□ -0.32
BBS4-205ENST00000562219 BRCA2P51587 3418 aa13.02□□□□□ -0.32
BBS4-205ENST00000562219 EXOSC9Q06265 439 aaKnown RBP13.02□□□□□ -0.33
BBS4-205ENST00000562219 TNFAIP1Q13829 316 aa13.02□□□□□ -0.33
BBS4-205ENST00000562219 RASA3Q14644 834 aa13.02□□□□□ -0.33
BBS4-205ENST00000562219 EPHA10Q5JZY3 1008 aa13.02□□□□□ -0.33
BBS4-205ENST00000562219 OTUD7BQ6GQQ9 843 aa13.02□□□□□ -0.33
BBS4-205ENST00000562219 LDHAL6AQ6ZMR3 332 aa13.02□□□□□ -0.33
BBS4-205ENST00000562219 ANKRD13AQ8IZ07 590 aa13.02□□□□□ -0.33
BBS4-205ENST00000562219 ERO1AQ96HE7 468 aa13.02□□□□□ -0.33
BBS4-205ENST00000562219 ZNF594Q96JF6 807 aaPredicted RBP13.02□□□□□ -0.33
BBS4-205ENST00000562219 CNNM1Q9NRU3 951 aa13.02□□□□□ -0.33
BBS4-205ENST00000562219 FAM205AQ6ZU69 1335 aa13.02□□□□□ -0.33
BBS4-205ENST00000562219 PLIN1O60240 522 aa13.01□□□□□ -0.33
BBS4-205ENST00000562219 USP2O75604 605 aaPredicted RBP13.01□□□□□ -0.33
BBS4-205ENST00000562219 GJA5P36382 358 aa13.01□□□□□ -0.33
BBS4-205ENST00000562219 CRHR2Q13324 411 aa13.01□□□□□ -0.33
BBS4-205ENST00000562219 SPDYE2Q495Y8 402 aa13.01□□□□□ -0.33
BBS4-205ENST00000562219 MFSD14BQ5SR56 506 aa13.01□□□□□ -0.33
BBS4-205ENST00000562219 INTS3Q68E01 1043 aaKnown RBP13.01□□□□□ -0.33
BBS4-205ENST00000562219 SERPINA10Q9UK55 444 aa13.01□□□□□ -0.33
BBS4-205ENST00000562219 ZSWIM8A7E2V4 1837 aa13□□□□□ -0.33
BBS4-205ENST00000562219 TESPA1A2RU30 521 aaPredicted RBP13□□□□□ -0.33
BBS4-205ENST00000562219 UBE4AQ14139 1066 aa13□□□□□ -0.33
BBS4-205ENST00000562219 TDRD7Q8NHU6 1098 aaKnown RBP13□□□□□ -0.33
BBS4-205ENST00000562219 MRS2Q9HD23 443 aa13□□□□□ -0.33
BBS4-205ENST00000562219 C9orf78Q9NZ63 289 aaPredicted RBP13□□□□□ -0.33
BBS4-205ENST00000562219 TTF2Q9UNY4 1162 aaKnown RBP13□□□□□ -0.33
BBS4-205ENST00000562219 AK9Q5TCS8 1911 aa13□□□□□ -0.33
BBS4-205ENST00000562219 ALDH1L1O75891 902 aa12.99□□□□□ -0.33
BBS4-205ENST00000562219 GYG1P46976 350 aa12.99□□□□□ -0.33
BBS4-205ENST00000562219 CD99L2Q8TCZ2 262 aa12.99□□□□□ -0.33
BBS4-205ENST00000562219 OPTNQ96CV9 577 aa12.99□□□□□ -0.33
BBS4-205ENST00000562219 ELP3Q9H9T3 547 aa12.99□□□□□ -0.33
BBS4-205ENST00000562219 ZNF70Q9UC06 446 aaPredicted RBP12.99□□□□□ -0.33
BBS4-205ENST00000562219 PTPN22Q9Y2R2 807 aa12.99□□□□□ -0.33
BBS4-205ENST00000562219 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
BBS4-205ENST00000562219 HIBADHP31937 336 aaKnown RBP12.98□□□□□ -0.33
BBS4-205ENST00000562219 SP3Q02447 781 aa12.98□□□□□ -0.33
BBS4-205ENST00000562219 DZIP1LQ8IYY4 767 aaKnown RBP12.98□□□□□ -0.33
BBS4-205ENST00000562219 GCC1Q96CN9 775 aa12.98□□□□□ -0.33
BBS4-205ENST00000562219 FAM84BQ96KN1 310 aaPredicted RBP12.98□□□□□ -0.33
BBS4-205ENST00000562219 TEPSINQ96N21 525 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms