RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 H7C1W4 665 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 CTAGE5O15320 804 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 MYCP01106 439 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-211ENST00000562199 CLK1P49759 484 aaKnown RBP6.61□□□□□ -1.35
CAPN3-211ENST00000562199 CENPCQ03188 943 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 LONRF1Q17RB8 773 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 ALDH1L2Q3SY69 923 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 CCDC73Q6ZRK6 1079 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 TAS1R3Q7RTX0 852 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 FILIP1Q7Z7B0 1213 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 UBE2Q1Q7Z7E8 422 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 JAZF1Q86VZ6 243 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 JDP2Q8WYK2 163 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 GMCL1Q96IK5 515 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 MAP7D2Q96T17 732 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 ALDH8A1Q9H2A2 487 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-211ENST00000562199 GPAMQ9HCL2 828 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 AVENQ9NQS1 362 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-211ENST00000562199 MBIPQ9NS73 344 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 SUN2Q9UH99 717 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 ACAD8Q9UKU7 415 aa6.61□□□□□ -1.35
CAPN3-211ENST00000562199 WASLO00401 505 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-211ENST00000562199 IFRD1O00458 451 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-211ENST00000562199 STAU1O95793 577 aaKnown RBP6.6□□□□□ -1.35
CAPN3-211ENST00000562199 GNRH1P01148 92 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 IL2RAP01589 272 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 NAT2P11245 290 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 HSD3B2P26439 372 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 PDE6BP35913 854 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 USP5P45974 858 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 DMTNQ08495 405 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 WASHC5Q12768 1159 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 COL19A1Q14993 1142 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 ENOX2Q16206 610 aaKnown RBP6.6□□□□□ -1.35
CAPN3-211ENST00000562199 MSL1Q68DK7 614 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-211ENST00000562199 GOLGA1Q92805 767 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 C8orf48Q96LL4 319 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 TRERF1Q96PN7 1200 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 ESYT1Q9BSJ8 1104 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 PRKAG2Q9UGJ0 569 aa6.6□□□□□ -1.35
CAPN3-211ENST00000562199 DMGDHQ9UI17 866 aaKnown RBP6.6□□□□□ -1.35
CAPN3-211ENST00000562199 ADGBQ8N7X0 1667 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 TMEM238LA0A1B0GVL6 79 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 PABPN1LA6NDY0 278 aaKnown RBP6.59□□□□□ -1.35
CAPN3-211ENST00000562199 POM121CA8CG34 1229 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 SPATA31C2B4DYI2 1134 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 F11P03951 625 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 GTF2F1P35269 517 aaKnown RBP eCLIP6.59□□□□□ -1.35
CAPN3-211ENST00000562199 TRPC1P48995 793 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 CCT2P78371 535 aaKnown RBP6.59□□□□□ -1.35
CAPN3-211ENST00000562199 NFE2L2Q16236 605 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 TSNAXIP1Q2TAA8 658 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 CFAP70Q5T0N1 1121 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 CCSAPQ6IQ19 270 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-211ENST00000562199 ZNF746Q6NUN9 644 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-211ENST00000562199 TTC30AQ86WT1 665 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 PAF1Q8N7H5 531 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 PPM1EQ8WY54 764 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 SCARF2Q96GP6 870 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-211ENST00000562199 CEP89Q96ST8 783 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 ZSCAN10Q96SZ4 725 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-211ENST00000562199 NUCKS1Q9H1E3 243 aaKnown RBP6.59□□□□□ -1.35
CAPN3-211ENST00000562199 ZSWIM4Q9H7M6 989 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 MRS2Q9HD23 443 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 ENAMQ9NRM1 1142 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 IQSEC3Q9UPP2 1182 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-211ENST00000562199 SLC45A1Q9Y2W3 748 aa6.59□□□□□ -1.35
CAPN3-211ENST00000562199 EPRSP07814 1512 aaKnown RBP6.59□□□□□ -1.35
CAPN3-211ENST00000562199 ANKRD30BQ9BXX2 1392 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 CNTNAP5Q8WYK1 1306 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 KDM5CP41229 1560 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 KAT6BQ8WYB5 2073 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 TRIM64CA6NLI5 447 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 GOLGA6L6A8MZA4 724 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 SOCS7O14512 581 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 NBPF7P0C2Y1 421 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-211ENST00000562199 FOSL1P15407 271 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 MX2P20592 715 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 RRM1P23921 792 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 SUZ12Q15022 739 aaKnown RBP6.58□□□□□ -1.36
CAPN3-211ENST00000562199 E2F5Q15329 346 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 IQCEQ6IPM2 695 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 B4GALNT3Q6L9W6 998 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 GPAT2Q6NUI2 795 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 TMEM214Q6NUQ4 689 aaKnown RBP6.58□□□□□ -1.36
CAPN3-211ENST00000562199 SKAP1Q86WV1 359 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 CHCHD4Q8N4Q1 142 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 NEDD1Q8NHV4 660 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 FRS2Q8WU20 508 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 ACDQ96AP0 544 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 TTC14Q96N46 770 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 MPHOSPH6Q99547 160 aaKnown RBP6.58□□□□□ -1.36
CAPN3-211ENST00000562199 POLR3CQ9BUI4 534 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-211ENST00000562199 NUDCQ9Y266 331 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 URB2Q14146 1524 aaKnown RBP6.58□□□□□ -1.36
CAPN3-211ENST00000562199 DAPK1P53355 1430 aa6.58□□□□□ -1.36
CAPN3-211ENST00000562199 DHX29Q7Z478 1369 aaKnown RBP6.57□□□□□ -1.36
CAPN3-211ENST00000562199 IQGAP2Q13576 1575 aa6.57□□□□□ -1.36
CAPN3-211ENST00000562199 KIF7Q2M1P5 1343 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms