RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 CHAF1AQ13111 956 aaPredicted RBP28.9■■■□□ 2.22
SMPD3-202ENST00000561749 TBC1D10BQ4KMP7 808 aaPredicted RBP28.9■■■□□ 2.22
SMPD3-202ENST00000561749 LDHDQ86WU2 507 aa28.9■■■□□ 2.22
SMPD3-202ENST00000561749 CERS5Q8N5B7 392 aa28.9■■■□□ 2.22
SMPD3-202ENST00000561749 SMC1BQ8NDV3 1235 aa28.9■■■□□ 2.22
SMPD3-202ENST00000561749 NEUROD6Q96NK8 337 aa28.9■■■□□ 2.22
SMPD3-202ENST00000561749 EGFRP00533 1210 aa28.89■■■□□ 2.22
SMPD3-202ENST00000561749 USP50Q70EL3 339 aaPredicted RBP28.89■■■□□ 2.22
SMPD3-202ENST00000561749 USP17L8P0C7I0 530 aa28.88■■■□□ 2.21
SMPD3-202ENST00000561749 PHKA1P46020 1223 aa28.88■■■□□ 2.21
SMPD3-202ENST00000561749 CHADLQ6NUI6 762 aa28.88■■■□□ 2.21
SMPD3-202ENST00000561749 KIAA0825Q8IV33 1275 aa28.88■■■□□ 2.21
SMPD3-202ENST00000561749 XAGE2Q96GT9 111 aa28.88■■■□□ 2.21
SMPD3-202ENST00000561749 FAM205AQ6ZU69 1335 aa28.88■■■□□ 2.21
SMPD3-202ENST00000561749 MYO3BQ8WXR4 1341 aa28.88■■■□□ 2.21
SMPD3-202ENST00000561749 APBB1O00213 710 aa28.87■■■□□ 2.21
SMPD3-202ENST00000561749 HIRAP54198 1017 aaPredicted RBP28.87■■■□□ 2.21
SMPD3-202ENST00000561749 POLR2AP24928 1970 aaKnown RBP28.86■■■□□ 2.21
SMPD3-202ENST00000561749 F8W031 263 aaPredicted RBP28.86■■■□□ 2.21
SMPD3-202ENST00000561749 COL1A1P02452 1464 aaPredicted RBP28.85■■■□□ 2.21
SMPD3-202ENST00000561749 ZNF280AP59817 542 aaPredicted RBP28.85■■■□□ 2.21
SMPD3-202ENST00000561749 FSTL1Q12841 308 aa28.85■■■□□ 2.21
SMPD3-202ENST00000561749 KIF4BQ2VIQ3 1234 aa28.85■■■□□ 2.21
SMPD3-202ENST00000561749 TNNI3KQ59H18 835 aa28.85■■■□□ 2.21
SMPD3-202ENST00000561749 MAP1SQ66K74 1059 aaPredicted RBP28.85■■■□□ 2.21
SMPD3-202ENST00000561749 CCDC102BQ68D86 513 aa28.85■■■□□ 2.21
SMPD3-202ENST00000561749 FPGT-TNNI3KV9GXZ4 949 aa28.85■■■□□ 2.21
SMPD3-202ENST00000561749 MFSD14BQ5SR56 506 aa28.84■■■□□ 2.21
SMPD3-202ENST00000561749 PCDHB15Q9Y5E8 787 aa28.84■■■□□ 2.21
SMPD3-202ENST00000561749 GORABQ5T7V8 394 aa28.83■■■□□ 2.21
SMPD3-202ENST00000561749 BCL11AQ9H165 835 aa28.83■■■□□ 2.21
SMPD3-202ENST00000561749 GNL3LQ9NVN8 582 aaKnown RBP28.83■■■□□ 2.21
SMPD3-202ENST00000561749 HSP90AB4PQ58FF6 505 aa28.82■■■□□ 2.2
SMPD3-202ENST00000561749 ERC1Q8IUD2 1116 aa28.82■■■□□ 2.2
SMPD3-202ENST00000561749 OGFOD1Q8N543 542 aa28.82■■■□□ 2.2
SMPD3-202ENST00000561749 MYOZ2Q9NPC6 264 aa28.82■■■□□ 2.2
SMPD3-202ENST00000561749 GPR108Q9NPR9 543 aa28.82■■■□□ 2.2
SMPD3-202ENST00000561749 FKBP1AP62942 108 aaKnown RBP28.81■■■□□ 2.2
SMPD3-202ENST00000561749 IRX6P78412 446 aaPredicted RBP28.81■■■□□ 2.2
SMPD3-202ENST00000561749 GRIK5Q16478 980 aa28.81■■■□□ 2.2
SMPD3-202ENST00000561749 RHPN1Q8TCX5 695 aa28.81■■■□□ 2.2
SMPD3-202ENST00000561749 DBNDD2Q9BQY9 259 aa28.81■■■□□ 2.2
SMPD3-202ENST00000561749 IL1RAPL2Q9NP60 686 aa28.81■■■□□ 2.2
SMPD3-202ENST00000561749 ASTN2O75129 1339 aaPredicted RBP28.8■■■□□ 2.2
SMPD3-202ENST00000561749 EXOC6Q8TAG9 804 aa28.8■■■□□ 2.2
SMPD3-202ENST00000561749 CCDC8Q9H0W5 538 aaPredicted RBP28.8■■■□□ 2.2
SMPD3-202ENST00000561749 HDAC9Q9UKV0 1011 aa28.8■■■□□ 2.2
SMPD3-202ENST00000561749 CNTROBQ8N137 903 aa28.79■■■□□ 2.2
SMPD3-202ENST00000561749 EAF2Q96CJ1 260 aaPredicted RBP28.79■■■□□ 2.2
SMPD3-202ENST00000561749 TLR7Q9NYK1 1049 aaKnown RBP28.79■■■□□ 2.2
SMPD3-202ENST00000561749 RASGRF1Q13972 1273 aa28.77■■■□□ 2.2
SMPD3-202ENST00000561749 TBC1D22AQ8WUA7 517 aa28.77■■■□□ 2.2
SMPD3-202ENST00000561749 DENND2AQ9ULE3 1009 aa28.77■■■□□ 2.2
SMPD3-202ENST00000561749 TTF2Q9UNY4 1162 aaKnown RBP28.77■■■□□ 2.2
SMPD3-202ENST00000561749 ECM29Q5VYK3 1845 aa28.76■■■□□ 2.19
SMPD3-202ENST00000561749 SCARF1Q14162 830 aa28.76■■■□□ 2.19
SMPD3-202ENST00000561749 AACSQ86V21 672 aa28.76■■■□□ 2.19
SMPD3-202ENST00000561749 KIF1BPQ96EK5 621 aa28.76■■■□□ 2.19
SMPD3-202ENST00000561749 DBNLQ9UJU6 430 aaKnown RBP28.76■■■□□ 2.19
SMPD3-202ENST00000561749 PCDHAC2Q9Y5I4 1007 aa28.76■■■□□ 2.19
SMPD3-202ENST00000561749 SEMA3EO15041 775 aa28.75■■■□□ 2.19
SMPD3-202ENST00000561749 RAB11FIP3O75154 756 aa28.75■■■□□ 2.19
SMPD3-202ENST00000561749 ITGBL1O95965 494 aaPredicted RBP28.75■■■□□ 2.19
SMPD3-202ENST00000561749 NBPF9Q3BBW0 867 aa28.75■■■□□ 2.19
SMPD3-202ENST00000561749 WDR66Q8TBY9 1149 aa28.75■■■□□ 2.19
SMPD3-202ENST00000561749 ZC3H15Q8WU90 426 aaKnown RBP28.75■■■□□ 2.19
SMPD3-202ENST00000561749 GGA3Q9NZ52 723 aa28.75■■■□□ 2.19
SMPD3-202ENST00000561749 AKAP11Q9UKA4 1901 aa28.75■■■□□ 2.19
SMPD3-202ENST00000561749 FMR1Q06787 632 aaKnown RBP eCLIP28.74■■■□□ 2.19
SMPD3-202ENST00000561749 TTC39AQ5SRH9 613 aa28.74■■■□□ 2.19
SMPD3-202ENST00000561749 GLIS2Q9BZE0 524 aaPredicted RBP28.74■■■□□ 2.19
SMPD3-202ENST00000561749 PGAP2Q9UHJ9 254 aa28.74■■■□□ 2.19
SMPD3-202ENST00000561749 TRPM7Q96QT4 1865 aa28.74■■■□□ 2.19
SMPD3-202ENST00000561749 TRAF5O00463 557 aa28.73■■■□□ 2.19
SMPD3-202ENST00000561749 HSPA6P17066 643 aa28.73■■■□□ 2.19
SMPD3-202ENST00000561749 RBM5P52756 815 aaKnown RBP eCLIP28.73■■■□□ 2.19
SMPD3-202ENST00000561749 CFAP100Q494V2 611 aa28.73■■■□□ 2.19
SMPD3-202ENST00000561749 PI16Q6UXB8 463 aa28.73■■■□□ 2.19
SMPD3-202ENST00000561749 WNT10BO00744 389 aa28.72■■■□□ 2.19
SMPD3-202ENST00000561749 ARID4AP29374 1257 aaPredicted RBP28.72■■■□□ 2.19
SMPD3-202ENST00000561749 DLGAP5Q15398 846 aa28.72■■■□□ 2.19
SMPD3-202ENST00000561749 ANGEL2Q5VTE6 544 aaKnown RBP28.72■■■□□ 2.19
SMPD3-202ENST00000561749 CLASRPQ8N2M8 674 aaKnown RBP28.72■■■□□ 2.19
SMPD3-202ENST00000561749 HMG20BQ9P0W2 317 aa28.72■■■□□ 2.19
SMPD3-202ENST00000561749 SMARCA5O60264 1052 aaPredicted RBP28.71■■■□□ 2.19
SMPD3-202ENST00000561749 UQCRFS1P1P0C7P4 283 aa28.71■■■□□ 2.19
SMPD3-202ENST00000561749 CCDC158Q5M9N0 1113 aa28.71■■■□□ 2.19
SMPD3-202ENST00000561749 DLK2Q6UY11 383 aa28.71■■■□□ 2.19
SMPD3-202ENST00000561749 DCPSQ96C86 337 aaKnown RBP28.71■■■□□ 2.19
SMPD3-202ENST00000561749 DCTPP1Q9H773 170 aa28.71■■■□□ 2.19
SMPD3-202ENST00000561749 SCAF8Q9UPN6 1271 aaKnown RBP28.71■■■□□ 2.19
SMPD3-202ENST00000561749 MYO5AQ9Y4I1 1855 aaKnown RBP28.71■■■□□ 2.19
SMPD3-202ENST00000561749 PASKQ96RG2 1323 aa28.7■■■□□ 2.19
SMPD3-202ENST00000561749 MCAMP43121 646 aa28.7■■■□□ 2.18
SMPD3-202ENST00000561749 MMP14P50281 582 aa28.7■■■□□ 2.18
SMPD3-202ENST00000561749 USP48Q86UV5 1035 aa28.7■■■□□ 2.18
SMPD3-202ENST00000561749 SNRKQ9NRH2 765 aa28.7■■■□□ 2.18
SMPD3-202ENST00000561749 ADM5C9JUS6 153 aa28.69■■■□□ 2.18
SMPD3-202ENST00000561749 PRDX5P30044 214 aa28.69■■■□□ 2.18
SMPD3-202ENST00000561749 KRT26Q7Z3Y9 468 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms