RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 PI4KAP1Q8N8J0 262 aa23.43■■□□□ 1.34
COMMD4-204ENST00000561662 TMEM106CQ9BVX2 250 aa23.43■■□□□ 1.34
COMMD4-204ENST00000561662 RBBP6Q7Z6E9 1792 aaKnown RBP23.42■■□□□ 1.34
COMMD4-204ENST00000561662 CD209Q9NNX6 404 aa23.42■■□□□ 1.34
COMMD4-204ENST00000561662 COL1A1P02452 1464 aaPredicted RBP23.42■■□□□ 1.34
COMMD4-204ENST00000561662 SZT2Q5T011 3432 aa23.42■■□□□ 1.34
COMMD4-204ENST00000561662 MYH3P11055 1940 aa23.41■■□□□ 1.34
COMMD4-204ENST00000561662 USP2O75604 605 aaPredicted RBP23.41■■□□□ 1.34
COMMD4-204ENST00000561662 ITGA6P23229 1130 aa23.41■■□□□ 1.34
COMMD4-204ENST00000561662 MMP14P50281 582 aa23.41■■□□□ 1.34
COMMD4-204ENST00000561662 CFAP100Q494V2 611 aa23.41■■□□□ 1.34
COMMD4-204ENST00000561662 OTUD7BQ6GQQ9 843 aa23.41■■□□□ 1.34
COMMD4-204ENST00000561662 ELP3Q9H9T3 547 aa23.41■■□□□ 1.34
COMMD4-204ENST00000561662 IREB2P48200 963 aaKnown RBP23.4■■□□□ 1.34
COMMD4-204ENST00000561662 KSR2Q6VAB6 950 aa23.4■■□□□ 1.34
COMMD4-204ENST00000561662 TSPYL6Q8N831 410 aa23.4■■□□□ 1.34
COMMD4-204ENST00000561662 HELBQ8NG08 1087 aaPredicted RBP23.4■■□□□ 1.34
COMMD4-204ENST00000561662 ZNF333Q96JL9 665 aa23.4■■□□□ 1.34
COMMD4-204ENST00000561662 PRMT6Q96LA8 375 aaPredicted RBP23.4■■□□□ 1.34
COMMD4-204ENST00000561662 MPHOSPH8Q99549 860 aa23.4■■□□□ 1.34
COMMD4-204ENST00000561662 IFT57Q9NWB7 429 aa23.4■■□□□ 1.34
COMMD4-204ENST00000561662 PTCH2Q9Y6C5 1203 aa23.4■■□□□ 1.34
COMMD4-204ENST00000561662 MYBBP1AQ9BQG0 1328 aaKnown RBP23.39■■□□□ 1.34
COMMD4-204ENST00000561662 TAF5LO75529 589 aa23.39■■□□□ 1.33
COMMD4-204ENST00000561662 RBM5P52756 815 aaKnown RBP eCLIP23.39■■□□□ 1.33
COMMD4-204ENST00000561662 CHRNDQ07001 517 aa23.39■■□□□ 1.33
COMMD4-204ENST00000561662 SLC4A8Q2Y0W8 1093 aa23.39■■□□□ 1.33
COMMD4-204ENST00000561662 SUPT20HL1Q3ZLR7 823 aa23.39■■□□□ 1.33
COMMD4-204ENST00000561662 CCDC30Q5VVM6 783 aa23.39■■□□□ 1.33
COMMD4-204ENST00000561662 CNKSR2Q8WXI2 1034 aa23.39■■□□□ 1.33
COMMD4-204ENST00000561662 ANKRD2Q9GZV1 360 aa23.39■■□□□ 1.33
COMMD4-204ENST00000561662 SPDYE2BA6NHP3 402 aa23.38■■□□□ 1.33
COMMD4-204ENST00000561662 NEURL1BA8MQ27 555 aa23.38■■□□□ 1.33
COMMD4-204ENST00000561662 SPDYE6P0CI01 402 aa23.38■■□□□ 1.33
COMMD4-204ENST00000561662 GNAI1P63096 354 aa23.38■■□□□ 1.33
COMMD4-204ENST00000561662 NEXNQ0ZGT2 675 aa23.38■■□□□ 1.33
COMMD4-204ENST00000561662 SLC9C1Q4G0N8 1177 aa23.38■■□□□ 1.33
COMMD4-204ENST00000561662 OPTNQ96CV9 577 aa23.38■■□□□ 1.33
COMMD4-204ENST00000561662 PPP2R3BQ9Y5P8 575 aa23.38■■□□□ 1.33
COMMD4-204ENST00000561662 TRIOBPQ9H2D6 2365 aa23.37■■□□□ 1.33
COMMD4-204ENST00000561662 H0YGN5 161 aa23.37■■□□□ 1.33
COMMD4-204ENST00000561662 APAF1O14727 1248 aa23.37■■□□□ 1.33
COMMD4-204ENST00000561662 MYO1BO43795 1136 aa23.37■■□□□ 1.33
COMMD4-204ENST00000561662 RASA3Q14644 834 aa23.37■■□□□ 1.33
COMMD4-204ENST00000561662 MTMR14Q8NCE2 650 aa23.37■■□□□ 1.33
COMMD4-204ENST00000561662 CEP290O15078 2479 aa23.36■■□□□ 1.33
COMMD4-204ENST00000561662 H7C1W4 665 aa23.36■■□□□ 1.33
COMMD4-204ENST00000561662 ECM2O94769 699 aaPredicted RBP23.36■■□□□ 1.33
COMMD4-204ENST00000561662 CDAN1Q8IWY9 1227 aa23.36■■□□□ 1.33
COMMD4-204ENST00000561662 ANKRD13AQ8IZ07 590 aa23.36■■□□□ 1.33
COMMD4-204ENST00000561662 G2E3Q7L622 706 aa23.35■■□□□ 1.33
COMMD4-204ENST00000561662 TESPA1A2RU30 521 aaPredicted RBP23.34■■□□□ 1.33
COMMD4-204ENST00000561662 TAF1CQ15572 869 aaPredicted RBP23.34■■□□□ 1.33
COMMD4-204ENST00000561662 SH3TC2Q8TF17 1288 aa23.34■■□□□ 1.33
COMMD4-204ENST00000561662 BRI3BPQ8WY22 251 aa23.34■■□□□ 1.33
COMMD4-204ENST00000561662 MS4A4AQ96JQ5 239 aa23.34■■□□□ 1.33
COMMD4-204ENST00000561662 LAMB1P07942 1786 aa23.34■■□□□ 1.33
COMMD4-204ENST00000561662 IRS2Q9Y4H2 1338 aa23.33■■□□□ 1.33
COMMD4-204ENST00000561662 OTOFQ9HC10 1997 aa23.33■■□□□ 1.33
COMMD4-204ENST00000561662 NBPF11Q86T75 865 aa23.33■■□□□ 1.33
COMMD4-204ENST00000561662 ARHGAP39Q9C0H5 1083 aa23.33■■□□□ 1.33
COMMD4-204ENST00000561662 PRKRIP1Q9H875 184 aaPredicted RBP23.33■■□□□ 1.33
COMMD4-204ENST00000561662 ECM29Q5VYK3 1845 aa23.33■■□□□ 1.32
COMMD4-204ENST00000561662 CCL15-CCL14A0A0B4J2E2 113 aa23.32■■□□□ 1.32
COMMD4-204ENST00000561662 CCL15Q16663 113 aa23.32■■□□□ 1.32
COMMD4-204ENST00000561662 UNCXA6NJT0 531 aa23.31■■□□□ 1.32
COMMD4-204ENST00000561662 GCKRQ14397 625 aa23.31■■□□□ 1.32
COMMD4-204ENST00000561662 CHRDL2Q6WN34 429 aa23.31■■□□□ 1.32
COMMD4-204ENST00000561662 FAM43AQ8N2R8 423 aa23.31■■□□□ 1.32
COMMD4-204ENST00000561662 TSR2Q969E8 191 aaKnown RBP23.31■■□□□ 1.32
COMMD4-204ENST00000561662 ZFYVE28Q9HCC9 887 aa23.31■■□□□ 1.32
COMMD4-204ENST00000561662 ZSWIM8A7E2V4 1837 aa23.31■■□□□ 1.32
COMMD4-204ENST00000561662 CASP7P55210 303 aa23.3■■□□□ 1.32
COMMD4-204ENST00000561662 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.3■■□□□ 1.32
COMMD4-204ENST00000561662 ZNF804AQ7Z570 1209 aa23.3■■□□□ 1.32
COMMD4-204ENST00000561662 OTUD5Q96G74 571 aa23.3■■□□□ 1.32
COMMD4-204ENST00000561662 PLA2G12BQ9BX93 195 aa23.3■■□□□ 1.32
COMMD4-204ENST00000561662 TDRD3Q9H7E2 651 aaKnown RBP23.3■■□□□ 1.32
COMMD4-204ENST00000561662 ANP32CO43423 234 aa23.29■■□□□ 1.32
COMMD4-204ENST00000561662 PLIN1O60240 522 aa23.29■■□□□ 1.32
COMMD4-204ENST00000561662 CSF1RP07333 972 aa23.29■■□□□ 1.32
COMMD4-204ENST00000561662 IL1R1P14778 569 aa23.29■■□□□ 1.32
COMMD4-204ENST00000561662 CALD1Q05682 793 aaKnown RBP23.29■■□□□ 1.32
COMMD4-204ENST00000561662 STK31Q9BXU1 1019 aa23.29■■□□□ 1.32
COMMD4-204ENST00000561662 ZNF70Q9UC06 446 aaPredicted RBP23.29■■□□□ 1.32
COMMD4-204ENST00000561662 CHMP3Q9Y3E7 222 aa23.29■■□□□ 1.32
COMMD4-204ENST00000561662 RANBP2P49792 3224 aaKnown RBP23.28■■□□□ 1.32
COMMD4-204ENST00000561662 ANKRD18BA2A2Z9 1011 aa23.28■■□□□ 1.32
COMMD4-204ENST00000561662 TCP10L2B9ZVM9 353 aa23.28■■□□□ 1.32
COMMD4-204ENST00000561662 VGLL4Q14135 290 aa23.28■■□□□ 1.32
COMMD4-204ENST00000561662 MIER1Q8N108 512 aa23.28■■□□□ 1.32
COMMD4-204ENST00000561662 TMEM39BQ9GZU3 492 aa23.28■■□□□ 1.32
COMMD4-204ENST00000561662 SLC4A2P04920 1241 aa23.26■■□□□ 1.31
COMMD4-204ENST00000561662 GTF2A2P52657 109 aa23.26■■□□□ 1.31
COMMD4-204ENST00000561662 ARHGEF6Q15052 776 aa23.26■■□□□ 1.31
COMMD4-204ENST00000561662 SPDYE2Q495Y8 402 aa23.26■■□□□ 1.31
COMMD4-204ENST00000561662 TEPSINQ96N21 525 aa23.26■■□□□ 1.31
COMMD4-204ENST00000561662 C15orf52Q6ZUT6 534 aaKnown RBP23.25■■□□□ 1.31
COMMD4-204ENST00000561662 ZNF594Q96JF6 807 aaPredicted RBP23.25■■□□□ 1.31
COMMD4-204ENST00000561662 RBM27Q9P2N5 1060 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms