RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PKN2Q16513 984 aaKnown RBP31.93■■■□□ 2.7
NME3-202ENST00000561637 CCDC57Q2TAC2 916 aa31.93■■■□□ 2.7
NME3-202ENST00000561637 NBPF9Q3BBW0 867 aa31.93■■■□□ 2.7
NME3-202ENST00000561637 PUS3Q9BZE2 481 aaKnown RBP31.93■■■□□ 2.7
NME3-202ENST00000561637 BICC1Q9H694 974 aaKnown RBP31.93■■■□□ 2.7
NME3-202ENST00000561637 SMC4Q9NTJ3 1288 aa31.93■■■□□ 2.7
NME3-202ENST00000561637 PLIN1O60240 522 aa31.92■■■□□ 2.7
NME3-202ENST00000561637 TAF7LQ5H9L4 462 aa31.92■■■□□ 2.7
NME3-202ENST00000561637 ANKRD44Q8N8A2 993 aa31.92■■■□□ 2.7
NME3-202ENST00000561637 LDHAL6AQ6ZMR3 332 aa31.91■■■□□ 2.7
NME3-202ENST00000561637 TM4SF4P48230 202 aa31.9■■■□□ 2.7
NME3-202ENST00000561637 MKRN3Q13064 507 aaKnown RBP31.9■■■□□ 2.7
NME3-202ENST00000561637 STRIP1Q5VSL9 837 aa31.9■■■□□ 2.7
NME3-202ENST00000561637 CNNM1Q9NRU3 951 aa31.9■■■□□ 2.7
NME3-202ENST00000561637 GPR25O00155 361 aa31.89■■■□□ 2.7
NME3-202ENST00000561637 GTF2IP78347 998 aa31.89■■■□□ 2.7
NME3-202ENST00000561637 ALDH1L2Q3SY69 923 aa31.89■■■□□ 2.7
NME3-202ENST00000561637 CD209Q9NNX6 404 aa31.89■■■□□ 2.7
NME3-202ENST00000561637 TTLL12Q14166 644 aaPredicted RBP31.88■■■□□ 2.69
NME3-202ENST00000561637 TTLL5Q6EMB2 1281 aa31.88■■■□□ 2.69
NME3-202ENST00000561637 USP44Q9H0E7 712 aa31.88■■■□□ 2.69
NME3-202ENST00000561637 R3HDMLQ9H3Y0 253 aa31.88■■■□□ 2.69
NME3-202ENST00000561637 MIER1Q8N108 512 aa31.87■■■□□ 2.69
NME3-202ENST00000561637 JAG2Q9Y219 1238 aa31.87■■■□□ 2.69
NME3-202ENST00000561637 RABL6Q3YEC7 729 aaPredicted RBP31.86■■■□□ 2.69
NME3-202ENST00000561637 CERS5Q8N5B7 392 aa31.86■■■□□ 2.69
NME3-202ENST00000561637 C15orf52Q6ZUT6 534 aaKnown RBP31.85■■■□□ 2.69
NME3-202ENST00000561637 KIAA0825Q8IV33 1275 aa31.85■■■□□ 2.69
NME3-202ENST00000561637 WNT10BO00744 389 aa31.84■■■□□ 2.69
NME3-202ENST00000561637 SASH1O94885 1247 aa31.84■■■□□ 2.69
NME3-202ENST00000561637 FBXO46Q6PJ61 603 aaPredicted RBP31.84■■■□□ 2.69
NME3-202ENST00000561637 KLHDC4Q8TBB5 520 aa31.84■■■□□ 2.69
NME3-202ENST00000561637 NOB1Q9ULX3 412 aaKnown RBP31.84■■■□□ 2.69
NME3-202ENST00000561637 LRRC24Q50LG9 513 aa31.83■■■□□ 2.69
NME3-202ENST00000561637 NOM1Q5C9Z4 860 aaKnown RBP31.83■■■□□ 2.69
NME3-202ENST00000561637 MKI67P46013 3256 aaKnown RBP31.82■■■□□ 2.68
NME3-202ENST00000561637 PTPN12Q05209 780 aaKnown RBP31.82■■■□□ 2.68
NME3-202ENST00000561637 RIPOR2Q9Y4F9 1068 aa31.82■■■□□ 2.68
NME3-202ENST00000561637 PRKG1Q13976 671 aa31.81■■■□□ 2.68
NME3-202ENST00000561637 PCDHAC2Q9Y5I4 1007 aa31.81■■■□□ 2.68
NME3-202ENST00000561637 HTTP42858 3142 aa31.8■■■□□ 2.68
NME3-202ENST00000561637 MYO3BQ8WXR4 1341 aa31.8■■■□□ 2.68
NME3-202ENST00000561637 FKTNO75072 461 aa31.79■■■□□ 2.68
NME3-202ENST00000561637 IL1R1P14778 569 aa31.79■■■□□ 2.68
NME3-202ENST00000561637 GYG1P46976 350 aa31.79■■■□□ 2.68
NME3-202ENST00000561637 ZNF804AQ7Z570 1209 aa31.79■■■□□ 2.68
NME3-202ENST00000561637 NF2P35240 595 aa31.78■■■□□ 2.68
NME3-202ENST00000561637 RARSP54136 660 aaKnown RBP31.78■■■□□ 2.68
NME3-202ENST00000561637 OGFOD1Q8N543 542 aa31.78■■■□□ 2.68
NME3-202ENST00000561637 CFHR5Q9BXR6 569 aa31.78■■■□□ 2.68
NME3-202ENST00000561637 SREBF2Q12772 1141 aa31.77■■■□□ 2.68
NME3-202ENST00000561637 DIEXFQ68CQ4 756 aaKnown RBP31.77■■■□□ 2.68
NME3-202ENST00000561637 FZD1Q9UP38 647 aa31.77■■■□□ 2.68
NME3-202ENST00000561637 CENPFP49454 3210 aa31.76■■■□□ 2.68
NME3-202ENST00000561637 F8W031 263 aaPredicted RBP31.76■■■□□ 2.67
NME3-202ENST00000561637 CT47B1P0C2W7 299 aaPredicted RBP31.76■■■□□ 2.67
NME3-202ENST00000561637 ZBED3Q96IU2 234 aaPredicted RBP31.76■■■□□ 2.67
NME3-202ENST00000561637 AOX1Q06278 1338 aa31.75■■■□□ 2.67
NME3-202ENST00000561637 RFX5P48382 616 aaPredicted RBP31.74■■■□□ 2.67
NME3-202ENST00000561637 UBE4AQ14139 1066 aa31.74■■■□□ 2.67
NME3-202ENST00000561637 LDLRAD1Q5T700 205 aa31.74■■■□□ 2.67
NME3-202ENST00000561637 ARMC9Q7Z3E5 817 aa31.74■■■□□ 2.67
NME3-202ENST00000561637 FAM84BQ96KN1 310 aaPredicted RBP31.74■■■□□ 2.67
NME3-202ENST00000561637 TNNQ9UQP3 1299 aa31.74■■■□□ 2.67
NME3-202ENST00000561637 METTL24Q5JXM2 366 aa31.73■■■□□ 2.67
NME3-202ENST00000561637 SPRYD7Q5W111 196 aa31.73■■■□□ 2.67
NME3-202ENST00000561637 VGLL2Q8N8G2 317 aa31.73■■■□□ 2.67
NME3-202ENST00000561637 ANGEL1Q9UNK9 670 aaKnown RBP31.72■■■□□ 2.67
NME3-202ENST00000561637 MROH5Q6ZUA9 1318 aa31.72■■■□□ 2.67
NME3-202ENST00000561637 LAMB1P07942 1786 aa31.71■■■□□ 2.67
NME3-202ENST00000561637 TDRD7Q8NHU6 1098 aaKnown RBP31.71■■■□□ 2.67
NME3-202ENST00000561637 IQSEC3Q9UPP2 1182 aaPredicted RBP31.71■■■□□ 2.67
NME3-202ENST00000561637 HIBADHP31937 336 aaKnown RBP31.7■■■□□ 2.67
NME3-202ENST00000561637 APOBEC3FQ8IUX4 373 aaKnown RBP31.7■■■□□ 2.67
NME3-202ENST00000561637 API5Q9BZZ5 524 aaKnown RBP31.7■■■□□ 2.67
NME3-202ENST00000561637 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.7■■■□□ 2.67
NME3-202ENST00000561637 ECM29Q5VYK3 1845 aa31.68■■■□□ 2.66
NME3-202ENST00000561637 POTEFA5A3E0 1075 aa31.68■■■□□ 2.66
NME3-202ENST00000561637 UBTFL1P0CB47 393 aaPredicted RBP31.68■■■□□ 2.66
NME3-202ENST00000561637 MEIS3Q99687 375 aa31.68■■■□□ 2.66
NME3-202ENST00000561637 TRIM17Q9Y577 477 aa31.68■■■□□ 2.66
NME3-202ENST00000561637 FAM205AQ6ZU69 1335 aa31.68■■■□□ 2.66
NME3-202ENST00000561637 BCAR3O75815 825 aa31.67■■■□□ 2.66
NME3-202ENST00000561637 GRIK5Q16478 980 aa31.67■■■□□ 2.66
NME3-202ENST00000561637 LRRFIP2Q9Y608 721 aaKnown RBP31.67■■■□□ 2.66
NME3-202ENST00000561637 RBBP6Q7Z6E9 1792 aaKnown RBP31.66■■■□□ 2.66
NME3-202ENST00000561637 BRCA2P51587 3418 aa31.66■■■□□ 2.66
NME3-202ENST00000561637 PDE8BO95263 885 aa31.66■■■□□ 2.66
NME3-202ENST00000561637 HNRNPUQ00839 825 aaKnown RBP eCLIP31.66■■■□□ 2.66
NME3-202ENST00000561637 DLGAP5Q15398 846 aa31.66■■■□□ 2.66
NME3-202ENST00000561637 CFAP100Q494V2 611 aa31.66■■■□□ 2.66
NME3-202ENST00000561637 OTOP1Q7RTM1 612 aa31.66■■■□□ 2.66
NME3-202ENST00000561637 FBXO33Q7Z6M2 555 aa31.66■■■□□ 2.66
NME3-202ENST00000561637 IFNL1Q8IU54 200 aa31.66■■■□□ 2.66
NME3-202ENST00000561637 GCC1Q96CN9 775 aa31.66■■■□□ 2.66
NME3-202ENST00000561637 SSC5DA1L4H1 1573 aa31.65■■■□□ 2.66
NME3-202ENST00000561637 CLRN2A0PK11 232 aa31.65■■■□□ 2.66
NME3-202ENST00000561637 ALDH1A1P00352 501 aa31.65■■■□□ 2.66
NME3-202ENST00000561637 FKBP1AP62942 108 aaKnown RBP31.65■■■□□ 2.66
NME3-202ENST00000561637 CLMNQ96JQ2 1002 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms