RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 NIP7Q9Y221 180 aaKnown RBP eCLIP9.18□□□□□ -0.94
TPM1-231ENST00000561395 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.18□□□□□ -0.94
TPM1-231ENST00000561395 ARAP2Q8WZ64 1704 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 RIC1Q4ADV7 1423 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 RTL9Q8NET4 1388 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 EYA2O00167 538 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 PITPNM1O00562 1244 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 ERC2O15083 957 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 EIF5BO60841 1220 aaKnown RBP9.17□□□□□ -0.94
TPM1-231ENST00000561395 GLRX3O76003 335 aaKnown RBP9.17□□□□□ -0.94
TPM1-231ENST00000561395 IL15P40933 162 aaPredicted RBP9.17□□□□□ -0.94
TPM1-231ENST00000561395 MFAP1P55081 439 aaKnown RBP9.17□□□□□ -0.94
TPM1-231ENST00000561395 TFCP2Q12800 502 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 IFIT5Q13325 482 aaKnown RBP9.17□□□□□ -0.94
TPM1-231ENST00000561395 TNNI3KQ59H18 835 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 TTLL11Q8NHH1 800 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 GLIS2Q9BZE0 524 aaPredicted RBP9.17□□□□□ -0.94
TPM1-231ENST00000561395 ADARB2Q9NS39 739 aaKnown RBP9.17□□□□□ -0.94
TPM1-231ENST00000561395 ECHDC1Q9NTX5 307 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 TAOK2Q9UL54 1235 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 FPGT-TNNI3KV9GXZ4 949 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 PAPPA2Q9BXP8 1791 aa9.17□□□□□ -0.94
TPM1-231ENST00000561395 KLRG2A4D1S0 409 aaPredicted RBP9.16□□□□□ -0.94
TPM1-231ENST00000561395 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
TPM1-231ENST00000561395 HSP90B1P14625 803 aaKnown RBP9.16□□□□□ -0.94
TPM1-231ENST00000561395 LRRC24Q50LG9 513 aa9.16□□□□□ -0.94
TPM1-231ENST00000561395 CASC1Q6TDU7 716 aa9.16□□□□□ -0.94
TPM1-231ENST00000561395 LARGE2Q8N3Y3 721 aa9.16□□□□□ -0.94
TPM1-231ENST00000561395 ZNF594Q96JF6 807 aaPredicted RBP9.16□□□□□ -0.94
TPM1-231ENST00000561395 TMX4Q9H1E5 349 aaPredicted RBP9.16□□□□□ -0.94
TPM1-231ENST00000561395 GREM2Q9H772 168 aa9.16□□□□□ -0.94
TPM1-231ENST00000561395 GPR108Q9NPR9 543 aa9.16□□□□□ -0.94
TPM1-231ENST00000561395 SAGE1Q9NXZ1 904 aa9.16□□□□□ -0.94
TPM1-231ENST00000561395 TLR7Q9NYK1 1049 aaKnown RBP9.16□□□□□ -0.94
TPM1-231ENST00000561395 A0A1B0GUL6 1792 aa9.16□□□□□ -0.94
TPM1-231ENST00000561395 TAF1P21675 1872 aa9.15□□□□□ -0.94
TPM1-231ENST00000561395 ANKRD18BA2A2Z9 1011 aa9.15□□□□□ -0.94
TPM1-231ENST00000561395 TRIM6-TRIM34B2RNG4 842 aa9.15□□□□□ -0.94
TPM1-231ENST00000561395 HCLS1P14317 486 aaPredicted RBP9.15□□□□□ -0.94
TPM1-231ENST00000561395 ITGA6P23229 1130 aa9.15□□□□□ -0.94
TPM1-231ENST00000561395 ALDH1B1P30837 517 aa9.15□□□□□ -0.94
TPM1-231ENST00000561395 TAF7LQ5H9L4 462 aa9.15□□□□□ -0.94
TPM1-231ENST00000561395 DDRGK1Q96HY6 314 aa9.15□□□□□ -0.94
TPM1-231ENST00000561395 IPO9Q96P70 1041 aaKnown RBP9.15□□□□□ -0.94
TPM1-231ENST00000561395 CCDC85AQ96PX6 553 aaPredicted RBP9.15□□□□□ -0.94
TPM1-231ENST00000561395 PUS3Q9BZE2 481 aaKnown RBP9.15□□□□□ -0.94
TPM1-231ENST00000561395 C22orf23Q9BZE7 217 aa9.15□□□□□ -0.94
TPM1-231ENST00000561395 CCDC8Q9H0W5 538 aaPredicted RBP9.15□□□□□ -0.94
TPM1-231ENST00000561395 GPRC5DQ9NZD1 345 aa9.15□□□□□ -0.94
TPM1-231ENST00000561395 ABCC12Q96J65 1359 aa9.14□□□□□ -0.95
TPM1-231ENST00000561395 FAM177BA6PVY3 158 aa9.14□□□□□ -0.95
TPM1-231ENST00000561395 HUNKP57058 714 aa9.14□□□□□ -0.95
TPM1-231ENST00000561395 CCDC152Q4G0S7 254 aa9.14□□□□□ -0.95
TPM1-231ENST00000561395 HABP4Q5JVS0 413 aaKnown RBP9.14□□□□□ -0.95
TPM1-231ENST00000561395 CTU1Q7Z7A3 348 aaKnown RBP9.14□□□□□ -0.95
TPM1-231ENST00000561395 NIM1KQ8IY84 436 aa9.14□□□□□ -0.95
TPM1-231ENST00000561395 RILPL2Q969X0 211 aa9.14□□□□□ -0.95
TPM1-231ENST00000561395 NYXQ9GZU5 481 aa9.14□□□□□ -0.95
TPM1-231ENST00000561395 DBNLQ9UJU6 430 aaKnown RBP9.14□□□□□ -0.95
TPM1-231ENST00000561395 HPS5Q9UPZ3 1129 aa9.14□□□□□ -0.95
TPM1-231ENST00000561395 MKI67P46013 3256 aaKnown RBP9.14□□□□□ -0.95
TPM1-231ENST00000561395 COL4A1P02462 1669 aa9.13□□□□□ -0.95
TPM1-231ENST00000561395 FAM155AB1AL88 458 aaPredicted RBP9.13□□□□□ -0.95
TPM1-231ENST00000561395 TRPA1O75762 1119 aa9.13□□□□□ -0.95
TPM1-231ENST00000561395 MAP4K4O95819 1239 aaPredicted RBP9.13□□□□□ -0.95
TPM1-231ENST00000561395 PRR29P0C7W0 189 aa9.13□□□□□ -0.95
TPM1-231ENST00000561395 CHMLP26374 656 aa9.13□□□□□ -0.95
TPM1-231ENST00000561395 RBM25P49756 843 aaKnown RBP9.13□□□□□ -0.95
TPM1-231ENST00000561395 CC2D2BQ6DHV5 1058 aa9.13□□□□□ -0.95
TPM1-231ENST00000561395 TPTE2Q6XPS3 522 aa9.13□□□□□ -0.95
TPM1-231ENST00000561395 CEP126Q9P2H0 1117 aa9.13□□□□□ -0.95
TPM1-231ENST00000561395 RIPOR2Q9Y4F9 1068 aa9.13□□□□□ -0.95
TPM1-231ENST00000561395 ATP5JP18859 108 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 KIF23Q02241 960 aaPredicted RBP9.12□□□□□ -0.95
TPM1-231ENST00000561395 SLC10A5Q5PT55 438 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 RGMBQ6NW40 437 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 LDHAL6AQ6ZMR3 332 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 CDC37L1Q7L3B6 337 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 SLC51AQ86UW1 340 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 VGLL2Q8N8G2 317 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 BBXQ8WY36 941 aaPredicted RBP9.12□□□□□ -0.95
TPM1-231ENST00000561395 DBNDD2Q9BQY9 259 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 ESYT1Q9BSJ8 1104 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 CNNM1Q9NRU3 951 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 RNF186Q9NXI6 227 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 PGAP2Q9UHJ9 254 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 AKAP2Q9Y2D5 859 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 RFX7Q2KHR2 1363 aa9.12□□□□□ -0.95
TPM1-231ENST00000561395 LRRC37AA6NMS7 1700 aa9.11□□□□□ -0.95
TPM1-231ENST00000561395 KIAA0100Q14667 2235 aaKnown RBP9.11□□□□□ -0.95
TPM1-231ENST00000561395 PSME4Q14997 1843 aa9.11□□□□□ -0.95
TPM1-231ENST00000561395 A0A1B0GUL7 405 aa9.11□□□□□ -0.95
TPM1-231ENST00000561395 PPIP5K2O43314 1243 aa9.11□□□□□ -0.95
TPM1-231ENST00000561395 REC8O95072 547 aa9.11□□□□□ -0.95
TPM1-231ENST00000561395 GTF2E1P29083 439 aaPredicted RBP9.11□□□□□ -0.95
TPM1-231ENST00000561395 GMPSP49915 693 aaPredicted RBP9.11□□□□□ -0.95
TPM1-231ENST00000561395 SF3B3Q15393 1217 aaKnown RBP9.11□□□□□ -0.95
TPM1-231ENST00000561395 AOC3Q16853 763 aa9.11□□□□□ -0.95
TPM1-231ENST00000561395 CRY2Q49AN0 593 aa9.11□□□□□ -0.95
TPM1-231ENST00000561395 METTL24Q5JXM2 366 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms