RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
TPM1-229ENST00000561242 DCTPP1Q9H773 170 aa13.07□□□□□ -0.32
TPM1-229ENST00000561242 GPRC5DQ9NZD1 345 aa13.07□□□□□ -0.32
TPM1-229ENST00000561242 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
TPM1-229ENST00000561242 TOMM70O94826 608 aa13.06□□□□□ -0.32
TPM1-229ENST00000561242 FGFR2P21802 821 aa13.06□□□□□ -0.32
TPM1-229ENST00000561242 HDAC1Q13547 482 aaPredicted RBP13.06□□□□□ -0.32
TPM1-229ENST00000561242 VGLL2Q8N8G2 317 aa13.06□□□□□ -0.32
TPM1-229ENST00000561242 L3MBTL3Q96JM7 780 aaPredicted RBP13.06□□□□□ -0.32
TPM1-229ENST00000561242 RAI14Q9P0K7 980 aa13.06□□□□□ -0.32
TPM1-229ENST00000561242 TTF2Q9UNY4 1162 aaKnown RBP13.06□□□□□ -0.32
TPM1-229ENST00000561242 JAG2Q9Y219 1238 aa13.06□□□□□ -0.32
TPM1-229ENST00000561242 SUGT1Q9Y2Z0 365 aa13.06□□□□□ -0.32
TPM1-229ENST00000561242 YDJCA8MPS7 323 aa13.05□□□□□ -0.32
TPM1-229ENST00000561242 KLRK1P26718 216 aa13.05□□□□□ -0.32
TPM1-229ENST00000561242 B4GALNT3Q6L9W6 998 aa13.05□□□□□ -0.32
TPM1-229ENST00000561242 TXNRD3Q86VQ6 643 aa13.05□□□□□ -0.32
TPM1-229ENST00000561242 LDHDQ86WU2 507 aa13.05□□□□□ -0.32
TPM1-229ENST00000561242 SULF1Q8IWU6 871 aa13.05□□□□□ -0.32
TPM1-229ENST00000561242 SPATA5Q8NB90 893 aa13.05□□□□□ -0.32
TPM1-229ENST00000561242 TEKT1Q969V4 418 aa13.05□□□□□ -0.32
TPM1-229ENST00000561242 NMRK2Q9NPI5 230 aa13.05□□□□□ -0.32
TPM1-229ENST00000561242 PCDHB15Q9Y5E8 787 aa13.05□□□□□ -0.32
TPM1-229ENST00000561242 DDX60Q8IY21 1712 aaKnown RBP13.05□□□□□ -0.32
TPM1-229ENST00000561242 ADORA1P30542 326 aa13.04□□□□□ -0.32
TPM1-229ENST00000561242 NF2P35240 595 aa13.04□□□□□ -0.32
TPM1-229ENST00000561242 PHKA1P46020 1223 aa13.04□□□□□ -0.32
TPM1-229ENST00000561242 TNNI2P48788 182 aa13.04□□□□□ -0.32
TPM1-229ENST00000561242 PRELPP51888 382 aa13.04□□□□□ -0.32
TPM1-229ENST00000561242 MAP3K12Q12852 859 aa13.04□□□□□ -0.32
TPM1-229ENST00000561242 KIF4BQ2VIQ3 1234 aa13.04□□□□□ -0.32
TPM1-229ENST00000561242 TBC1D10BQ4KMP7 808 aaPredicted RBP13.04□□□□□ -0.32
TPM1-229ENST00000561242 ZSCAN25Q6NSZ9 544 aa13.04□□□□□ -0.32
TPM1-229ENST00000561242 SLC51AQ86UW1 340 aa13.04□□□□□ -0.32
TPM1-229ENST00000561242 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.32
TPM1-229ENST00000561242 TAF1DQ9H5J8 278 aaPredicted RBP13.04□□□□□ -0.32
TPM1-229ENST00000561242 COL11A2P13942 1736 aaPredicted RBP13.04□□□□□ -0.32
TPM1-229ENST00000561242 WTIPA6NIX2 430 aaPredicted RBP13.03□□□□□ -0.32
TPM1-229ENST00000561242 BAG3O95817 575 aa13.03□□□□□ -0.32
TPM1-229ENST00000561242 EPS15P42566 896 aa13.03□□□□□ -0.32
TPM1-229ENST00000561242 DACT2Q5SW24 774 aa13.03□□□□□ -0.32
TPM1-229ENST00000561242 ZC3H15Q8WU90 426 aaKnown RBP13.03□□□□□ -0.32
TPM1-229ENST00000561242 DNAJC2Q99543 621 aaKnown RBP13.03□□□□□ -0.32
TPM1-229ENST00000561242 DBNDD2Q9BQY9 259 aa13.03□□□□□ -0.32
TPM1-229ENST00000561242 MYOZ2Q9NPC6 264 aa13.03□□□□□ -0.32
TPM1-229ENST00000561242 KCNQ5Q9NR82 932 aa13.03□□□□□ -0.32
TPM1-229ENST00000561242 FAM205AQ6ZU69 1335 aa13.03□□□□□ -0.32
TPM1-229ENST00000561242 IGSF3O75054 1194 aa13.02□□□□□ -0.33
TPM1-229ENST00000561242 FSTL1Q12841 308 aa13.02□□□□□ -0.33
TPM1-229ENST00000561242 TNFAIP1Q13829 316 aa13.02□□□□□ -0.33
TPM1-229ENST00000561242 ERICH6BQ5W0A0 696 aa13.02□□□□□ -0.33
TPM1-229ENST00000561242 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
TPM1-229ENST00000561242 SIRT2Q8IXJ6 389 aa13.02□□□□□ -0.33
TPM1-229ENST00000561242 RBM46Q8TBY0 533 aaKnown RBP13.02□□□□□ -0.33
TPM1-229ENST00000561242 EAF2Q96CJ1 260 aaPredicted RBP13.02□□□□□ -0.33
TPM1-229ENST00000561242 ECHDC1Q9NTX5 307 aa13.02□□□□□ -0.33
TPM1-229ENST00000561242 LAMB2P55268 1798 aa13.02□□□□□ -0.33
TPM1-229ENST00000561242 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.33
TPM1-229ENST00000561242 SMARCA5O60264 1052 aaPredicted RBP13.01□□□□□ -0.33
TPM1-229ENST00000561242 IDH1O75874 414 aaKnown RBP13.01□□□□□ -0.33
TPM1-229ENST00000561242 SCNN1DP51172 638 aa13.01□□□□□ -0.33
TPM1-229ENST00000561242 CFAP100Q494V2 611 aa13.01□□□□□ -0.33
TPM1-229ENST00000561242 CDC37L1Q7L3B6 337 aa13.01□□□□□ -0.33
TPM1-229ENST00000561242 DDRGK1Q96HY6 314 aa13.01□□□□□ -0.33
TPM1-229ENST00000561242 VEZTQ9HBM0 779 aa13.01□□□□□ -0.33
TPM1-229ENST00000561242 SNRKQ9NRH2 765 aa13.01□□□□□ -0.33
TPM1-229ENST00000561242 SERPINA10Q9UK55 444 aa13.01□□□□□ -0.33
TPM1-229ENST00000561242 ARFGEF1Q9Y6D6 1849 aa13.01□□□□□ -0.33
TPM1-229ENST00000561242 GLRX3O76003 335 aaKnown RBP13□□□□□ -0.33
TPM1-229ENST00000561242 HDLBPQ00341 1268 aaKnown RBP13□□□□□ -0.33
TPM1-229ENST00000561242 SCARF1Q14162 830 aa13□□□□□ -0.33
TPM1-229ENST00000561242 NAA16Q6N069 864 aaPredicted RBP13□□□□□ -0.33
TPM1-229ENST00000561242 SAMD7Q7Z3H4 446 aa13□□□□□ -0.33
TPM1-229ENST00000561242 CERS3Q8IU89 383 aa13□□□□□ -0.33
TPM1-229ENST00000561242 APOBEC3FQ8IUX4 373 aaKnown RBP13□□□□□ -0.33
TPM1-229ENST00000561242 HOOK2Q96ED9 719 aa13□□□□□ -0.33
TPM1-229ENST00000561242 ZNF512BQ96KM6 892 aaPredicted RBP13□□□□□ -0.33
TPM1-229ENST00000561242 BOLA2Q9H3K6 86 aa13□□□□□ -0.33
TPM1-229ENST00000561242 TRIM6-TRIM34B2RNG4 842 aa12.99□□□□□ -0.33
TPM1-229ENST00000561242 PLCG2P16885 1265 aa12.99□□□□□ -0.33
TPM1-229ENST00000561242 ARID4AP29374 1257 aaPredicted RBP12.99□□□□□ -0.33
TPM1-229ENST00000561242 CRKP46108 304 aa12.99□□□□□ -0.33
TPM1-229ENST00000561242 RASGRF1Q13972 1273 aa12.99□□□□□ -0.33
TPM1-229ENST00000561242 TTLL12Q14166 644 aaPredicted RBP12.99□□□□□ -0.33
TPM1-229ENST00000561242 TMED8Q6PL24 325 aaPredicted RBP12.99□□□□□ -0.33
TPM1-229ENST00000561242 CHD1LQ86WJ1 897 aa12.99□□□□□ -0.33
TPM1-229ENST00000561242 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
TPM1-229ENST00000561242 MXD3Q9BW11 206 aa12.99□□□□□ -0.33
TPM1-229ENST00000561242 HMG20BQ9P0W2 317 aa12.99□□□□□ -0.33
TPM1-229ENST00000561242 DBNLQ9UJU6 430 aaKnown RBP12.99□□□□□ -0.33
TPM1-229ENST00000561242 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
TPM1-229ENST00000561242 PDS5AQ29RF7 1337 aaKnown RBP12.98□□□□□ -0.33
TPM1-229ENST00000561242 TTC41PQ6P2S7 1318 aa12.98□□□□□ -0.33
TPM1-229ENST00000561242 ATP5JP18859 108 aa12.98□□□□□ -0.33
TPM1-229ENST00000561242 ZNF280AP59817 542 aaPredicted RBP12.98□□□□□ -0.33
TPM1-229ENST00000561242 CENPQQ7L2Z9 268 aaPredicted RBP12.98□□□□□ -0.33
TPM1-229ENST00000561242 KRT26Q7Z3Y9 468 aa12.98□□□□□ -0.33
TPM1-229ENST00000561242 AMOTL1Q8IY63 956 aa12.98□□□□□ -0.33
TPM1-229ENST00000561242 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.98□□□□□ -0.33
TPM1-229ENST00000561242 MRIQ9BWK5 157 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms